RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 VWFP04275 2813 aa8.19□□□□□ -1.1
USP35-207ENST00000530546 UPK3BQ9BT76 320 aa8.19□□□□□ -1.1
USP35-207ENST00000530546 A8MZ25 164 aa8.18□□□□□ -1.1
USP35-207ENST00000530546 LINC00308Q8TCZ7 52 aa8.18□□□□□ -1.1
USP35-207ENST00000530546 CYSTM1Q9H1C7 97 aa8.18□□□□□ -1.1
USP35-207ENST00000530546 TRGV4A0A0C4DH28 118 aa8.17□□□□□ -1.1
USP35-207ENST00000530546 Q6JHZ5 121 aa8.17□□□□□ -1.1
USP35-207ENST00000530546 C22orf24Q9Y442 160 aa8.17□□□□□ -1.1
USP35-207ENST00000530546 DEFB130BP0DP73 79 aa8.17□□□□□ -1.1
USP35-207ENST00000530546 DEFB130AP0DP74 79 aa8.17□□□□□ -1.1
USP35-207ENST00000530546 NTM-AS1Q6ZSK4 140 aa8.17□□□□□ -1.1
USP35-207ENST00000530546 NBEAL2Q6ZNJ1 2754 aa8.17□□□□□ -1.1
USP35-207ENST00000530546 TENM1Q9UKZ4 2725 aa8.17□□□□□ -1.1
USP35-207ENST00000530546 ATRQ13535 2644 aa8.16□□□□□ -1.1
USP35-207ENST00000530546 TRBV10-1A0A0K0K1A3 114 aa8.16□□□□□ -1.1
USP35-207ENST00000530546 Q5XG85 94 aa8.16□□□□□ -1.1
USP35-207ENST00000530546 DNAL4O96015 105 aa8.15□□□□□ -1.1
USP35-207ENST00000530546 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.15□□□□□ -1.1
USP35-207ENST00000530546 TRAV13-1A0A0B4J241 112 aa8.15□□□□□ -1.11
USP35-207ENST00000530546 MALP21145 153 aa8.15□□□□□ -1.11
USP35-207ENST00000530546 OVOL2Q9BRP0 275 aa8.15□□□□□ -1.11
USP35-207ENST00000530546 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
USP35-207ENST00000530546 OXTP01178 125 aa8.14□□□□□ -1.11
USP35-207ENST00000530546 C4orf26Q17RF5 130 aa8.14□□□□□ -1.11
USP35-207ENST00000530546 PRIMA1Q86XR5 153 aa8.14□□□□□ -1.11
USP35-207ENST00000530546 DSCR8Q96T75 97 aa8.14□□□□□ -1.11
USP35-207ENST00000530546 CDKN2A-AS1Q9UH64 79 aa8.14□□□□□ -1.11
USP35-207ENST00000530546 IGLV5-45A0A087WSX0 123 aa8.14□□□□□ -1.11
USP35-207ENST00000530546 COX6A2Q02221 97 aa8.13□□□□□ -1.11
USP35-207ENST00000530546 UBE2L6O14933 153 aa8.13□□□□□ -1.11
USP35-207ENST00000530546 C9orf66Q5T8R8 295 aa8.13□□□□□ -1.11
USP35-207ENST00000530546 USP17L23D6RBM5 183 aa8.12□□□□□ -1.11
USP35-207ENST00000530546 DEFB4AO15263 64 aa8.12□□□□□ -1.11
USP35-207ENST00000530546 HRCT1Q6UXD1 115 aa8.12□□□□□ -1.11
USP35-207ENST00000530546 IGKV3OR2-268A0A0C4DH90 116 aa8.12□□□□□ -1.11
USP35-207ENST00000530546 FHL2Q14192 279 aa8.12□□□□□ -1.11
USP35-207ENST00000530546 TMEM243Q9BU79 118 aa8.12□□□□□ -1.11
USP35-207ENST00000530546 NDUFC2O95298 119 aa8.11□□□□□ -1.11
USP35-207ENST00000530546 FAM218AQ96MZ4 157 aa8.11□□□□□ -1.11
USP35-207ENST00000530546 FLNBO75369 2602 aaKnown RBP8.11□□□□□ -1.11
USP35-207ENST00000530546 TRBV6-4A0A1B0GX49 114 aa8.11□□□□□ -1.11
USP35-207ENST00000530546 IGLV5-39A0A0G2JS06 123 aa8.1□□□□□ -1.11
USP35-207ENST00000530546 LINC00242Q5T6M2 205 aa8.1□□□□□ -1.11
USP35-207ENST00000530546 Q9H8V8 135 aa8.1□□□□□ -1.11
USP35-207ENST00000530546 RPL28P46779 137 aaKnown RBP8.1□□□□□ -1.11
USP35-207ENST00000530546 DEFB135Q30KP9 77 aa8.1□□□□□ -1.11
USP35-207ENST00000530546 OBSCN-AS1Q96MR7 158 aa8.1□□□□□ -1.11
USP35-207ENST00000530546 LINC01561Q8N1V8 128 aa8.1□□□□□ -1.11
USP35-207ENST00000530546 TEP1Q99973 2627 aaKnown RBP8.09□□□□□ -1.11
USP35-207ENST00000530546 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
USP35-207ENST00000530546 CDC42SE2Q9NRR3 84 aa8.09□□□□□ -1.11
USP35-207ENST00000530546 X6R8D5 127 aa8.09□□□□□ -1.11
USP35-207ENST00000530546 TRAV13-2A0A0B4J235 113 aa8.09□□□□□ -1.11
USP35-207ENST00000530546 IGKV3D-7A0A0C4DH55 119 aa8.09□□□□□ -1.11
USP35-207ENST00000530546 ZNF625Q96I27 306 aaPredicted RBP8.09□□□□□ -1.11
USP35-207ENST00000530546 A0A096LPF7 62 aa8.08□□□□□ -1.12
USP35-207ENST00000530546 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
USP35-207ENST00000530546 F8P00451 2351 aa8.08□□□□□ -1.12
USP35-207ENST00000530546 C1orf43Q9BWL3 253 aa8.08□□□□□ -1.12
USP35-207ENST00000530546 LINC00846Q9NV44 126 aa8.08□□□□□ -1.12
USP35-207ENST00000530546 TRRAPQ9Y4A5 3859 aa8.08□□□□□ -1.12
USP35-207ENST00000530546 Q9HAA7 133 aa8.07□□□□□ -1.12
USP35-207ENST00000530546 GYPEP15421 78 aa8.07□□□□□ -1.12
USP35-207ENST00000530546 A0A087WVE0 104 aa8.07□□□□□ -1.12
USP35-207ENST00000530546 C14orf132Q9NPU4 83 aa8.07□□□□□ -1.12
USP35-207ENST00000530546 PRO0628Q9UI54 55 aa8.07□□□□□ -1.12
USP35-207ENST00000530546 V9GYY9 64 aa8.07□□□□□ -1.12
USP35-207ENST00000530546 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
USP35-207ENST00000530546 S100A7L2Q5SY68 101 aa8.06□□□□□ -1.12
USP35-207ENST00000530546 ATP5EP2Q5VTU8 51 aa8.06□□□□□ -1.12
USP35-207ENST00000530546 TRBV6-8A0A0A6YYG3 113 aa8.05□□□□□ -1.12
USP35-207ENST00000530546 H0YGX0 51 aa8.05□□□□□ -1.12
USP35-207ENST00000530546 CRPP02741 224 aa8.05□□□□□ -1.12
USP35-207ENST00000530546 FAM19A3Q7Z5A8 133 aa8.05□□□□□ -1.12
USP35-207ENST00000530546 SMIM1B2RUZ4 78 aa8.04□□□□□ -1.12
USP35-207ENST00000530546 EPM2AB3EWF7 344 aa8.04□□□□□ -1.12
USP35-207ENST00000530546 IGHV4-28A0A0C4DH34 117 aa8.03□□□□□ -1.12
USP35-207ENST00000530546 PFN2P35080 140 aa8.03□□□□□ -1.12
USP35-207ENST00000530546 APOC4P55056 127 aa8.03□□□□□ -1.12
USP35-207ENST00000530546 SERP1Q9Y6X1 66 aa8.03□□□□□ -1.12
USP35-207ENST00000530546 FAM236DA0A1B0GTK5 79 aa8.02□□□□□ -1.13
USP35-207ENST00000530546 FAM236CP0DP71 79 aa8.02□□□□□ -1.13
USP35-207ENST00000530546 LINC00612Q8N6U2 182 aa8.02□□□□□ -1.13
USP35-207ENST00000530546 TOMM7Q9P0U1 55 aa8.02□□□□□ -1.13
USP35-207ENST00000530546 PAX4O43316 350 aa8.02□□□□□ -1.13
USP35-207ENST00000530546 GHRHP01286 108 aa8.02□□□□□ -1.13
USP35-207ENST00000530546 HTN3P15516 51 aa8.02□□□□□ -1.13
USP35-207ENST00000530546 PRO0255Q9UI72 69 aa8.02□□□□□ -1.13
USP35-207ENST00000530546 A0A087WYN8 130 aa8.01□□□□□ -1.13
USP35-207ENST00000530546 C9orf129Q5T035 196 aaKnown RBP8.01□□□□□ -1.13
USP35-207ENST00000530546 CLPSL2Q6UWE3 100 aa8.01□□□□□ -1.13
USP35-207ENST00000530546 DAD1P61803 113 aa8.01□□□□□ -1.13
USP35-207ENST00000530546 CELA1Q9UNI1 258 aa8.01□□□□□ -1.13
USP35-207ENST00000530546 PKIGQ9Y2B9 76 aa8.01□□□□□ -1.13
USP35-207ENST00000530546 IGHV4-30-4P0DP06 118 aa8□□□□□ -1.13
USP35-207ENST00000530546 OXLD1Q5BKU9 147 aa8□□□□□ -1.13
USP35-207ENST00000530546 TRBV10-3A0A0K0K1G6 114 aa8□□□□□ -1.13
USP35-207ENST00000530546 CCKP06307 115 aa8□□□□□ -1.13
USP35-207ENST00000530546 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
USP35-207ENST00000530546 LYRM9A8MSI8 78 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms