RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 LBHQ53QV2 105 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-219ENST00000530404 A0A087X002 238 aa12.27□□□□□ -0.45
TSPAN4-219ENST00000530404 F8VRH5 84 aa12.27□□□□□ -0.45
TSPAN4-219ENST00000530404 HERVK_113P63121 156 aa12.27□□□□□ -0.45
TSPAN4-219ENST00000530404 MRPL55Q7Z7F7 128 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-219ENST00000530404 NPSP0C0P6 89 aa12.26□□□□□ -0.45
TSPAN4-219ENST00000530404 ANAPC16Q96DE5 110 aa12.26□□□□□ -0.45
TSPAN4-219ENST00000530404 GEMIN7Q9H840 131 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-219ENST00000530404 MT-ND4LP03901 98 aa12.25□□□□□ -0.45
TSPAN4-219ENST00000530404 NXT2Q9NPJ8 142 aaKnown RBP12.25□□□□□ -0.45
TSPAN4-219ENST00000530404 RPL37AP8A6NKH3 93 aa12.24□□□□□ -0.45
TSPAN4-219ENST00000530404 PNRC1Q12796 327 aaPredicted RBP12.24□□□□□ -0.45
TSPAN4-219ENST00000530404 K7EMI3 77 aa12.23□□□□□ -0.45
TSPAN4-219ENST00000530404 BCE1O60756 84 aa12.23□□□□□ -0.45
TSPAN4-219ENST00000530404 SEC11AP67812 179 aa12.23□□□□□ -0.45
TSPAN4-219ENST00000530404 KIAA1644Q3SXP7 199 aa12.23□□□□□ -0.45
TSPAN4-219ENST00000530404 TOMM6Q96B49 74 aa12.23□□□□□ -0.45
TSPAN4-219ENST00000530404 LINC00167Q96N53 147 aa12.23□□□□□ -0.45
TSPAN4-219ENST00000530404 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
TSPAN4-219ENST00000530404 TP73-AS1Q9UF72 201 aa12.23□□□□□ -0.45
TSPAN4-219ENST00000530404 RPL28P46779 137 aaKnown RBP12.22□□□□□ -0.45
TSPAN4-219ENST00000530404 ANAPC11Q9NYG5 84 aa12.22□□□□□ -0.45
TSPAN4-219ENST00000530404 GAGE10A6NGK3 116 aa12.21□□□□□ -0.45
TSPAN4-219ENST00000530404 SMIM1B2RUZ4 78 aa12.21□□□□□ -0.45
TSPAN4-219ENST00000530404 PAPPA-AS1Q5QFB9 102 aa12.21□□□□□ -0.45
TSPAN4-219ENST00000530404 ADCYAP1P18509 176 aa12.2□□□□□ -0.46
TSPAN4-219ENST00000530404 CXCL5P42830 114 aa12.2□□□□□ -0.46
TSPAN4-219ENST00000530404 TYMSOSQ8TAI1 123 aa12.2□□□□□ -0.46
TSPAN4-219ENST00000530404 COX7B2Q8TF08 81 aa12.19□□□□□ -0.46
TSPAN4-219ENST00000530404 SCGB3A1Q96QR1 104 aa12.19□□□□□ -0.46
TSPAN4-219ENST00000530404 CRYGAP11844 174 aa12.18□□□□□ -0.46
TSPAN4-219ENST00000530404 RAB5BP61020 215 aa12.18□□□□□ -0.46
TSPAN4-219ENST00000530404 SPINK8P0C7L1 97 aa12.17□□□□□ -0.46
TSPAN4-219ENST00000530404 ERASQ7Z444 233 aa12.17□□□□□ -0.46
TSPAN4-219ENST00000530404 SCO1O75880 301 aa12.16□□□□□ -0.46
TSPAN4-219ENST00000530404 G0S2P27469 103 aa12.16□□□□□ -0.46
TSPAN4-219ENST00000530404 PDZD11Q5EBL8 140 aa12.16□□□□□ -0.46
TSPAN4-219ENST00000530404 TINCRA0A1B0GVN0 87 aa12.15□□□□□ -0.46
TSPAN4-219ENST00000530404 MUC17Q685J3 4493 aa12.14□□□□□ -0.47
TSPAN4-219ENST00000530404 KRTAP13-2Q52LG2 175 aa12.14□□□□□ -0.47
TSPAN4-219ENST00000530404 FAT4Q6V0I7 4981 aa12.13□□□□□ -0.47
TSPAN4-219ENST00000530404 IGLV5-45A0A087WSX0 123 aa12.13□□□□□ -0.47
TSPAN4-219ENST00000530404 UBE2AP49459 152 aa12.13□□□□□ -0.47
TSPAN4-219ENST00000530404 RETNLBQ9BQ08 111 aa12.13□□□□□ -0.47
TSPAN4-219ENST00000530404 KRTAP13-1Q8IUC0 172 aa12.12□□□□□ -0.47
TSPAN4-219ENST00000530404 NKAPP1Q8N9T2 125 aa12.12□□□□□ -0.47
TSPAN4-219ENST00000530404 IGLV5-37A0A075B6J1 123 aa12.11□□□□□ -0.47
TSPAN4-219ENST00000530404 IGKV2-28A0A075B6P5 120 aa12.11□□□□□ -0.47
TSPAN4-219ENST00000530404 IGKV2D-28P01615 120 aa12.11□□□□□ -0.47
TSPAN4-219ENST00000530404 CST9LQ9H4G1 147 aa12.11□□□□□ -0.47
TSPAN4-219ENST00000530404 A0A0U1RQV1 116 aa12.1□□□□□ -0.47
TSPAN4-219ENST00000530404 RAB14P61106 215 aa12.1□□□□□ -0.47
TSPAN4-219ENST00000530404 PFN2P35080 140 aa12.07□□□□□ -0.48
TSPAN4-219ENST00000530404 PMVKQ15126 192 aa12.07□□□□□ -0.48
TSPAN4-219ENST00000530404 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
TSPAN4-219ENST00000530404 PRLHP81277 87 aa12.06□□□□□ -0.48
TSPAN4-219ENST00000530404 ATP5LO75964 103 aa12.05□□□□□ -0.48
TSPAN4-219ENST00000530404 LINC00304Q8N9R0 145 aa12.05□□□□□ -0.48
TSPAN4-219ENST00000530404 TMEM238C9JI98 176 aa12.03□□□□□ -0.48
TSPAN4-219ENST00000530404 FAM229BQ4G0N7 80 aa12.03□□□□□ -0.48
TSPAN4-219ENST00000530404 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
TSPAN4-219ENST00000530404 FAM19A1Q7Z5A9 133 aa12.03□□□□□ -0.48
TSPAN4-219ENST00000530404 MRPL18Q9H0U6 180 aaKnown RBP12.03□□□□□ -0.48
TSPAN4-219ENST00000530404 TRAV9-1A0A075B6T8 112 aa12.02□□□□□ -0.49
TSPAN4-219ENST00000530404 H3BRM9 83 aa12.02□□□□□ -0.49
TSPAN4-219ENST00000530404 GNB1LQ9BYB4 327 aa12.02□□□□□ -0.49
TSPAN4-219ENST00000530404 KRTAP9-2Q9BYQ4 174 aa12.02□□□□□ -0.49
TSPAN4-219ENST00000530404 SMCO4Q9NRQ5 59 aa12.02□□□□□ -0.49
TSPAN4-219ENST00000530404 LINC01549A6NIU2 74 aa12.01□□□□□ -0.49
TSPAN4-219ENST00000530404 VPREB1P12018 145 aa12.01□□□□□ -0.49
TSPAN4-219ENST00000530404 IGKV2D-26A0A0A0MRZ7 120 aa12□□□□□ -0.49
TSPAN4-219ENST00000530404 IGLC3P0DOY3 106 aa12□□□□□ -0.49
TSPAN4-219ENST00000530404 NDUFA6P56556 154 aa12□□□□□ -0.49
TSPAN4-219ENST00000530404 CLLU1Q5K131 121 aa12□□□□□ -0.49
TSPAN4-219ENST00000530404 ZNF625Q96I27 306 aaPredicted RBP12□□□□□ -0.49
TSPAN4-219ENST00000530404 TMEM126AQ9H061 195 aa12□□□□□ -0.49
TSPAN4-219ENST00000530404 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
TSPAN4-219ENST00000530404 IGLV5-39A0A0G2JS06 123 aa11.99□□□□□ -0.49
TSPAN4-219ENST00000530404 ZNF22P17026 224 aaPredicted RBP11.99□□□□□ -0.49
TSPAN4-219ENST00000530404 LCE2AQ5TA79 106 aaPredicted RBP11.99□□□□□ -0.49
TSPAN4-219ENST00000530404 Q8NDZ9 215 aa11.99□□□□□ -0.49
TSPAN4-219ENST00000530404 ERG28Q9UKR5 140 aa11.99□□□□□ -0.49
TSPAN4-219ENST00000530404 TMEM218A2RU14 115 aa11.98□□□□□ -0.49
TSPAN4-219ENST00000530404 S100PP25815 95 aa11.98□□□□□ -0.49
TSPAN4-219ENST00000530404 FABP9Q0Z7S8 132 aa11.98□□□□□ -0.49
TSPAN4-219ENST00000530404 C3orf22Q8N5N4 141 aa11.98□□□□□ -0.49
TSPAN4-219ENST00000530404 M0R378 163 aa11.97□□□□□ -0.49
TSPAN4-219ENST00000530404 A0A096LNJ9 63 aa11.96□□□□□ -0.49
TSPAN4-219ENST00000530404 CDIP1Q9H305 208 aa11.96□□□□□ -0.49
TSPAN4-219ENST00000530404 IGLV7-46A0A075B6I9 117 aa11.95□□□□□ -0.5
TSPAN4-219ENST00000530404 RPL24P83731 157 aaKnown RBP11.93□□□□□ -0.5
TSPAN4-219ENST00000530404 PMCHL1Q16048 86 aa11.93□□□□□ -0.5
TSPAN4-219ENST00000530404 TPRXLQ17RH7 258 aa11.93□□□□□ -0.5
TSPAN4-219ENST00000530404 UQCC3Q6UW78 93 aa11.93□□□□□ -0.5
TSPAN4-219ENST00000530404 PLEKHB2Q96CS7 222 aa11.93□□□□□ -0.5
TSPAN4-219ENST00000530404 URB1-AS1Q96HZ7 61 aa11.93□□□□□ -0.5
TSPAN4-219ENST00000530404 CBLN2Q8IUK8 224 aa11.92□□□□□ -0.5
TSPAN4-219ENST00000530404 COX19Q49B96 90 aa11.91□□□□□ -0.5
TSPAN4-219ENST00000530404 HIGD2AQ9BW72 106 aa11.91□□□□□ -0.5
TSPAN4-219ENST00000530404 C11orf86A6NJI1 115 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms