RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 LOC107984640A0A0U1RRK4 108 aa5.2□□□□□ -1.58
SSBP3-211ENST00000528787 LECT2O14960 151 aa5.2□□□□□ -1.58
SSBP3-211ENST00000528787 SPINK8P0C7L1 97 aa5.2□□□□□ -1.58
SSBP3-211ENST00000528787 HIGD2BQ4VC39 106 aa5.2□□□□□ -1.58
SSBP3-211ENST00000528787 C9orf163Q8N9P6 203 aa5.2□□□□□ -1.58
SSBP3-211ENST00000528787 J3QQQ9 107 aa5.19□□□□□ -1.58
SSBP3-211ENST00000528787 JOSD1Q15040 202 aaPredicted RBP5.19□□□□□ -1.58
SSBP3-211ENST00000528787 VPS13DQ5THJ4 4388 aa5.18□□□□□ -1.58
SSBP3-211ENST00000528787 C16orf90A8MZG2 172 aa5.18□□□□□ -1.58
SSBP3-211ENST00000528787 TLX1NBP0CAT3 122 aa5.18□□□□□ -1.58
SSBP3-211ENST00000528787 PMCHL2Q9BQD1 86 aa5.18□□□□□ -1.58
SSBP3-211ENST00000528787 NDUFA12Q9UI09 145 aa5.18□□□□□ -1.58
SSBP3-211ENST00000528787 NDUFC2-KCTD14E9PQ53 114 aa5.17□□□□□ -1.58
SSBP3-211ENST00000528787 KIAA0087Q14695 138 aa5.17□□□□□ -1.58
SSBP3-211ENST00000528787 MEIG1Q5JSS6 88 aa5.17□□□□□ -1.58
SSBP3-211ENST00000528787 VAMP8Q9BV40 100 aa5.17□□□□□ -1.58
SSBP3-211ENST00000528787 DNAH1Q9P2D7 4330 aa5.16□□□□□ -1.58
SSBP3-211ENST00000528787 Q6ZRU5 148 aa5.16□□□□□ -1.58
SSBP3-211ENST00000528787 Q6ZVH6 145 aa5.16□□□□□ -1.58
SSBP3-211ENST00000528787 DPH3Q96FX2 82 aa5.16□□□□□ -1.58
SSBP3-211ENST00000528787 ERG28Q9UKR5 140 aa5.16□□□□□ -1.58
SSBP3-211ENST00000528787 KMT2CQ8NEZ4 4911 aaKnown RBP5.15□□□□□ -1.58
SSBP3-211ENST00000528787 A0A1B0GVY2 172 aa5.15□□□□□ -1.59
SSBP3-211ENST00000528787 ZNF815PA8K554 130 aa5.15□□□□□ -1.59
SSBP3-211ENST00000528787 TMEM238C9JI98 176 aa5.15□□□□□ -1.59
SSBP3-211ENST00000528787 RPL18AQ02543 176 aaKnown RBP5.15□□□□□ -1.59
SSBP3-211ENST00000528787 WFDC2Q14508 124 aa5.15□□□□□ -1.59
SSBP3-211ENST00000528787 UNQ6190/PRO20217Q6UXQ8 127 aa5.15□□□□□ -1.59
SSBP3-211ENST00000528787 SCGB1D4Q6XE38 83 aa5.15□□□□□ -1.59
SSBP3-211ENST00000528787 BOD1L2Q8IYS8 172 aa5.15□□□□□ -1.59
SSBP3-211ENST00000528787 ZNF625Q96I27 306 aaPredicted RBP5.15□□□□□ -1.59
SSBP3-211ENST00000528787 MIEN1Q9BRT3 115 aa5.15□□□□□ -1.59
SSBP3-211ENST00000528787 TIMM17BO60830 172 aa5.14□□□□□ -1.59
SSBP3-211ENST00000528787 SMIM6P0DI80 62 aa5.14□□□□□ -1.59
SSBP3-211ENST00000528787 PCP4P48539 62 aa5.14□□□□□ -1.59
SSBP3-211ENST00000528787 RPL24P83731 157 aaKnown RBP5.14□□□□□ -1.59
SSBP3-211ENST00000528787 C2orf82Q6UX34 121 aa5.14□□□□□ -1.59
SSBP3-211ENST00000528787 STPG4Q8N801 248 aa5.14□□□□□ -1.59
SSBP3-211ENST00000528787 C6orf48Q9UBA6 75 aa5.14□□□□□ -1.59
SSBP3-211ENST00000528787 A0A0J9YXY3 114 aa5.13□□□□□ -1.59
SSBP3-211ENST00000528787 PTTG1IPP53801 180 aa5.13□□□□□ -1.59
SSBP3-211ENST00000528787 LINC00158P58513 81 aa5.13□□□□□ -1.59
SSBP3-211ENST00000528787 SDIM1Q6ZPB5 146 aa5.13□□□□□ -1.59
SSBP3-211ENST00000528787 ATOH7Q8N100 152 aa5.13□□□□□ -1.59
SSBP3-211ENST00000528787 LINC00526Q96FQ7 95 aa5.13□□□□□ -1.59
SSBP3-211ENST00000528787 HYDINQ4G0P3 5121 aa5.13□□□□□ -1.59
SSBP3-211ENST00000528787 RYR2Q92736 4967 aa5.13□□□□□ -1.59
SSBP3-211ENST00000528787 FRAS1Q86XX4 4008 aa5.12□□□□□ -1.59
SSBP3-211ENST00000528787 PCP4L1A6NKN8 68 aa5.12□□□□□ -1.59
SSBP3-211ENST00000528787 DLEU1O43261 78 aa5.12□□□□□ -1.59
SSBP3-211ENST00000528787 PFN2P35080 140 aa5.12□□□□□ -1.59
SSBP3-211ENST00000528787 KRTAP10-2P60368 255 aa5.12□□□□□ -1.59
SSBP3-211ENST00000528787 GAGE2BQ13066 116 aa5.12□□□□□ -1.59
SSBP3-211ENST00000528787 MAJINQ3KP22 176 aa5.12□□□□□ -1.59
SSBP3-211ENST00000528787 PPDPFQ9H3Y8 114 aa5.12□□□□□ -1.59
SSBP3-211ENST00000528787 SLPIP03973 132 aa5.11□□□□□ -1.59
SSBP3-211ENST00000528787 COX8AP10176 69 aa5.11□□□□□ -1.59
SSBP3-211ENST00000528787 IFITM1P13164 125 aa5.11□□□□□ -1.59
SSBP3-211ENST00000528787 SPATA45Q537H7 98 aa5.11□□□□□ -1.59
SSBP3-211ENST00000528787 LBHQ53QV2 105 aaPredicted RBP5.11□□□□□ -1.59
SSBP3-211ENST00000528787 PAM16Q9Y3D7 125 aa5.11□□□□□ -1.59
SSBP3-211ENST00000528787 IGKV2-24A0A0C4DH68 120 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 CDK2AP2O75956 126 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 GAGE2EQ4V326 116 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 C10orf25Q5T742 122 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 SLC25A34Q6PIV7 304 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 Q6ZSA8 131 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 NKAPP1Q8N9T2 125 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 C7orf33Q8WU49 177 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 GAGE2DQ9UEU5 116 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 TP73-AS1Q9UF72 201 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 PLA2G2DQ9UNK4 145 aa5.1□□□□□ -1.59
SSBP3-211ENST00000528787 IGKV2D-26A0A0A0MRZ7 120 aa5.09□□□□□ -1.59
SSBP3-211ENST00000528787 SMIM13P0DJ93 91 aa5.09□□□□□ -1.59
SSBP3-211ENST00000528787 SRSF9Q13242 221 aaKnown RBP eCLIP5.09□□□□□ -1.59
SSBP3-211ENST00000528787 PYY3Q5JQD4 70 aa5.09□□□□□ -1.59
SSBP3-211ENST00000528787 Q6ZRP5 223 aa5.09□□□□□ -1.59
SSBP3-211ENST00000528787 SPACA4Q8TDM5 124 aa5.09□□□□□ -1.59
SSBP3-211ENST00000528787 SACSQ9NZJ4 4579 aa5.09□□□□□ -1.59
SSBP3-211ENST00000528787 A0A096LNI7 61 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 LOC107984156A0A0G2JMH3 177 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 NDUFC2O95298 119 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 TSPEAR-AS2P59090 65 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 C21orf62-AS1Q17RA5 79 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 ARL17AQ8IVW1 177 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 MIR7-3HGQ8N6C7 128 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 SPANXDQ9BXN6 97 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 SND1-IT1Q9HBX3 110 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 SPANXB1Q9NS25 103 aaPredicted RBP5.08□□□□□ -1.6
SSBP3-211ENST00000528787 SPANXCQ9NY87 97 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 HIGD1BQ9P298 99 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 UQCR10Q9UDW1 63 aa5.08□□□□□ -1.6
SSBP3-211ENST00000528787 TSTD3H0UI37 97 aa5.07□□□□□ -1.6
SSBP3-211ENST00000528787 TAL2Q16559 108 aa5.07□□□□□ -1.6
SSBP3-211ENST00000528787 C9orf116Q5BN46 136 aaPredicted RBP5.07□□□□□ -1.6
SSBP3-211ENST00000528787 PLAC8Q9NZF1 115 aa5.07□□□□□ -1.6
SSBP3-211ENST00000528787 TRBV10-2A0A0K0K1G8 114 aa5.06□□□□□ -1.6
SSBP3-211ENST00000528787 KRTAP10-1P60331 282 aa5.06□□□□□ -1.6
SSBP3-211ENST00000528787 PCP2Q8IVA1 136 aa5.06□□□□□ -1.6
SSBP3-211ENST00000528787 HIST1H4GQ99525 98 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms