RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 M0QXV9 152 aa10.08□□□□□ -0.8
ECHDC1-220ENST00000528402 CKS1BP61024 79 aa10.08□□□□□ -0.8
ECHDC1-220ENST00000528402 MUC7Q8TAX7 377 aa10.08□□□□□ -0.8
ECHDC1-220ENST00000528402 TRRAPQ9Y4A5 3859 aa10.08□□□□□ -0.8
ECHDC1-220ENST00000528402 DEFB131BA0A096LNP1 70 aa10.07□□□□□ -0.8
ECHDC1-220ENST00000528402 A0A0U1RRA0 63 aa10.07□□□□□ -0.8
ECHDC1-220ENST00000528402 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
ECHDC1-220ENST00000528402 CLPSL2Q6UWE3 100 aa10.07□□□□□ -0.8
ECHDC1-220ENST00000528402 MIR7-3HGQ8N6C7 128 aa10.07□□□□□ -0.8
ECHDC1-220ENST00000528402 TM2D3Q9BRN9 247 aa10.07□□□□□ -0.8
ECHDC1-220ENST00000528402 FOXI1Q12951 378 aa10.07□□□□□ -0.8
ECHDC1-220ENST00000528402 WFDC2Q14508 124 aa10.07□□□□□ -0.8
ECHDC1-220ENST00000528402 SOSTDC1Q6X4U4 206 aa10.07□□□□□ -0.8
ECHDC1-220ENST00000528402 TRIAP1O43715 76 aa10.06□□□□□ -0.8
ECHDC1-220ENST00000528402 CRPP02741 224 aa10.06□□□□□ -0.8
ECHDC1-220ENST00000528402 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
ECHDC1-220ENST00000528402 KLK12Q9UKR0 248 aa10.06□□□□□ -0.8
ECHDC1-220ENST00000528402 TRAV10A0A0B4J240 114 aa10.05□□□□□ -0.8
ECHDC1-220ENST00000528402 C15orf53Q8NAA6 179 aa10.05□□□□□ -0.8
ECHDC1-220ENST00000528402 LINC01600Q96MT4 127 aa10.05□□□□□ -0.8
ECHDC1-220ENST00000528402 SND1-IT1Q9HBX3 110 aa10.05□□□□□ -0.8
ECHDC1-220ENST00000528402 GAGE12HA6NDE8 117 aa10.04□□□□□ -0.8
ECHDC1-220ENST00000528402 NANOS2P60321 138 aaKnown RBP10.04□□□□□ -0.8
ECHDC1-220ENST00000528402 ENHOQ6UWT2 76 aa10.04□□□□□ -0.8
ECHDC1-220ENST00000528402 CBY1Q9Y3M2 126 aa10.04□□□□□ -0.8
ECHDC1-220ENST00000528402 STAB1Q9NY15 2570 aa10.03□□□□□ -0.8
ECHDC1-220ENST00000528402 K7EIL1 84 aa10.03□□□□□ -0.8
ECHDC1-220ENST00000528402 FBN1P35555 2871 aaKnown RBP10.03□□□□□ -0.8
ECHDC1-220ENST00000528402 IGLV10-54A0A075B6I4 117 aa10.02□□□□□ -0.81
ECHDC1-220ENST00000528402 DEFB121Q5J5C9 76 aa10.02□□□□□ -0.81
ECHDC1-220ENST00000528402 PFN2P35080 140 aa10.01□□□□□ -0.81
ECHDC1-220ENST00000528402 CCL18P55774 89 aa10.01□□□□□ -0.81
ECHDC1-220ENST00000528402 ESRGQ1W209 222 aa10.01□□□□□ -0.81
ECHDC1-220ENST00000528402 ETDBQ3ZM63 59 aa10.01□□□□□ -0.81
ECHDC1-220ENST00000528402 LINC01620Q4KN68 170 aa10.01□□□□□ -0.81
ECHDC1-220ENST00000528402 Q8N3U1 123 aa10.01□□□□□ -0.81
ECHDC1-220ENST00000528402 SLC25A20O43772 301 aa10□□□□□ -0.81
ECHDC1-220ENST00000528402 LINC01556Q5JQF7 62 aa10□□□□□ -0.81
ECHDC1-220ENST00000528402 TRBV10-2A0A0K0K1G8 114 aa9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 LST1O00453 97 aa9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 NDUFC2O95298 119 aa9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 SMCPP49901 116 aaPredicted RBP9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 TEN1Q86WV5 123 aa9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 C9JAW5 83 aa9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 F8WDY8 70 aa9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 WFDC10BQ8IUB3 73 aa9.99□□□□□ -0.81
ECHDC1-220ENST00000528402 CMYA5Q8N3K9 4069 aa9.98□□□□□ -0.81
ECHDC1-220ENST00000528402 RNF151Q2KHN1 245 aa9.98□□□□□ -0.81
ECHDC1-220ENST00000528402 C2orf82Q6UX34 121 aa9.98□□□□□ -0.81
ECHDC1-220ENST00000528402 VPS25Q9BRG1 176 aa9.98□□□□□ -0.81
ECHDC1-220ENST00000528402 H3BT86 120 aa9.97□□□□□ -0.81
ECHDC1-220ENST00000528402 ANKRD29Q8N6D5 301 aa9.97□□□□□ -0.81
ECHDC1-220ENST00000528402 PPDPFLQ8WWR9 84 aa9.97□□□□□ -0.81
ECHDC1-220ENST00000528402 DNAH3Q8TD57 4116 aa9.97□□□□□ -0.81
ECHDC1-220ENST00000528402 MAST4O15021 2626 aa9.97□□□□□ -0.81
ECHDC1-220ENST00000528402 IGKV2-28A0A075B6P5 120 aa9.96□□□□□ -0.82
ECHDC1-220ENST00000528402 H0YGX0 51 aa9.96□□□□□ -0.82
ECHDC1-220ENST00000528402 IGKV2D-28P01615 120 aa9.96□□□□□ -0.82
ECHDC1-220ENST00000528402 DNAH10OSP0CZ25 163 aa9.96□□□□□ -0.82
ECHDC1-220ENST00000528402 CARD19Q96LW7 228 aa9.96□□□□□ -0.82
ECHDC1-220ENST00000528402 MTURNQ8N3F0 131 aa9.95□□□□□ -0.82
ECHDC1-220ENST00000528402 LINC00337Q8N6G1 96 aa9.95□□□□□ -0.82
ECHDC1-220ENST00000528402 KRTAP3-3Q9BYR6 98 aa9.95□□□□□ -0.82
ECHDC1-220ENST00000528402 KRTAP3-2Q9BYR7 98 aa9.95□□□□□ -0.82
ECHDC1-220ENST00000528402 COL6A5A8TX70 2615 aa9.94□□□□□ -0.82
ECHDC1-220ENST00000528402 TRACP01848 142 aa9.94□□□□□ -0.82
ECHDC1-220ENST00000528402 NTN5Q8WTR8 489 aaPredicted RBP9.94□□□□□ -0.82
ECHDC1-220ENST00000528402 PRB2P02812 416 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-220ENST00000528402 MRAPQ8TCY5 172 aa9.93□□□□□ -0.82
ECHDC1-220ENST00000528402 C1orf43Q9BWL3 253 aa9.93□□□□□ -0.82
ECHDC1-220ENST00000528402 ZNF561-AS1K7EIQ3 104 aa9.92□□□□□ -0.82
ECHDC1-220ENST00000528402 KRTAP26-1Q6PEX3 210 aa9.92□□□□□ -0.82
ECHDC1-220ENST00000528402 CLEC2BQ92478 149 aa9.92□□□□□ -0.82
ECHDC1-220ENST00000528402 C2orf48Q96LS8 159 aa9.92□□□□□ -0.82
ECHDC1-220ENST00000528402 UNQ6190/PRO20217Q6UXQ8 127 aa9.91□□□□□ -0.82
ECHDC1-220ENST00000528402 TMEM126AQ9H061 195 aa9.9□□□□□ -0.82
ECHDC1-220ENST00000528402 OR13C6PQ8NH95 151 aa9.9□□□□□ -0.83
ECHDC1-220ENST00000528402 SMIM11BQ8TCY0 68 aa9.9□□□□□ -0.83
ECHDC1-220ENST00000528402 RMI2Q96E14 147 aa9.89□□□□□ -0.83
ECHDC1-220ENST00000528402 MDFIQ99750 246 aa9.89□□□□□ -0.83
ECHDC1-220ENST00000528402 UPK3BQ9BT76 320 aa9.89□□□□□ -0.83
ECHDC1-220ENST00000528402 PKD1L1Q8TDX9 2849 aa9.88□□□□□ -0.83
ECHDC1-220ENST00000528402 C6orf223Q8N319 242 aa9.88□□□□□ -0.83
ECHDC1-220ENST00000528402 A0A1B0GX51 115 aa9.87□□□□□ -0.83
ECHDC1-220ENST00000528402 C10orf25Q5T742 122 aa9.87□□□□□ -0.83
ECHDC1-220ENST00000528402 CAMK2N2Q96S95 79 aa9.87□□□□□ -0.83
ECHDC1-220ENST00000528402 B9D2Q9BPU9 175 aa9.87□□□□□ -0.83
ECHDC1-220ENST00000528402 LINC00588Q9Y4M8 146 aa9.87□□□□□ -0.83
ECHDC1-220ENST00000528402 IGKV2D-24A0A075B6R9 120 aa9.86□□□□□ -0.83
ECHDC1-220ENST00000528402 C9orf116Q5BN46 136 aaPredicted RBP9.86□□□□□ -0.83
ECHDC1-220ENST00000528402 C6orf48Q9UBA6 75 aa9.85□□□□□ -0.83
ECHDC1-220ENST00000528402 SNCGO76070 127 aa9.84□□□□□ -0.83
ECHDC1-220ENST00000528402 NHLRC4P0CG21 123 aaPredicted RBP9.84□□□□□ -0.83
ECHDC1-220ENST00000528402 DNAL4O96015 105 aa9.83□□□□□ -0.84
ECHDC1-220ENST00000528402 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
ECHDC1-220ENST00000528402 S100A7L2Q5SY68 101 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms