RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 FAM19A5Q7Z5A7 132 aaPredicted RBP14.2□□□□□ -0.14
PKP3-206ENST00000528036 TOMM7Q9P0U1 55 aa14.2□□□□□ -0.14
PKP3-206ENST00000528036 LINC01546A6NGU7 62 aa14.19□□□□□ -0.14
PKP3-206ENST00000528036 IGLV7-43P04211 117 aa14.19□□□□□ -0.14
PKP3-206ENST00000528036 RHEBQ15382 184 aa14.18□□□□□ -0.14
PKP3-206ENST00000528036 CDKN2A-AS1Q9UH64 79 aa14.18□□□□□ -0.14
PKP3-206ENST00000528036 FAM168BA1KXE4 195 aa14.17□□□□□ -0.14
PKP3-206ENST00000528036 M0QXV9 152 aa14.17□□□□□ -0.14
PKP3-206ENST00000528036 F8VRH5 84 aa14.16□□□□□ -0.14
PKP3-206ENST00000528036 UBE2BP63146 152 aa14.16□□□□□ -0.14
PKP3-206ENST00000528036 COMMD7Q86VX2 200 aa14.16□□□□□ -0.14
PKP3-206ENST00000528036 TINCRA0A1B0GVN0 87 aa14.15□□□□□ -0.14
PKP3-206ENST00000528036 C10orf91Q5T1B1 145 aa14.15□□□□□ -0.14
PKP3-206ENST00000528036 FA2HQ7L5A8 372 aa14.15□□□□□ -0.14
PKP3-206ENST00000528036 PDZD11Q5EBL8 140 aa14.14□□□□□ -0.15
PKP3-206ENST00000528036 LINC00469Q8N7U9 141 aa14.14□□□□□ -0.15
PKP3-206ENST00000528036 SMCO4Q9NRQ5 59 aa14.14□□□□□ -0.15
PKP3-206ENST00000528036 FABP9Q0Z7S8 132 aa14.13□□□□□ -0.15
PKP3-206ENST00000528036 C9orf129Q5T035 196 aaKnown RBP14.13□□□□□ -0.15
PKP3-206ENST00000528036 CARHSP1Q9Y2V2 147 aaKnown RBP14.13□□□□□ -0.15
PKP3-206ENST00000528036 TNXBP22105 4242 aa14.12□□□□□ -0.15
PKP3-206ENST00000528036 LBHQ53QV2 105 aaPredicted RBP14.12□□□□□ -0.15
PKP3-206ENST00000528036 MRPL18Q9H0U6 180 aaKnown RBP14.12□□□□□ -0.15
PKP3-206ENST00000528036 IGLV5-45A0A087WSX0 123 aa14.11□□□□□ -0.15
PKP3-206ENST00000528036 PMVKQ15126 192 aa14.11□□□□□ -0.15
PKP3-206ENST00000528036 RPS10P5Q9NQ39 176 aa14.11□□□□□ -0.15
PKP3-206ENST00000528036 H0Y9J4 135 aa14.1□□□□□ -0.15
PKP3-206ENST00000528036 CST9LQ9H4G1 147 aa14.1□□□□□ -0.15
PKP3-206ENST00000528036 KRTAP7-1Q8IUC3 87 aa14.09□□□□□ -0.15
PKP3-206ENST00000528036 SMIM1B2RUZ4 78 aa14.08□□□□□ -0.16
PKP3-206ENST00000528036 TP73-AS1Q9UF72 201 aa14.08□□□□□ -0.16
PKP3-206ENST00000528036 H3BRM9 83 aa14.07□□□□□ -0.16
PKP3-206ENST00000528036 NUPR1O60356 82 aa14.07□□□□□ -0.16
PKP3-206ENST00000528036 COX7B2Q8TF08 81 aa14.07□□□□□ -0.16
PKP3-206ENST00000528036 KRTAP11-1Q8IUC1 163 aa14.05□□□□□ -0.16
PKP3-206ENST00000528036 C22orf24Q9Y442 160 aa14.05□□□□□ -0.16
PKP3-206ENST00000528036 IGLV1-50A0A075B6I6 118 aa14.04□□□□□ -0.16
PKP3-206ENST00000528036 XAGE1AQ9HD64 81 aa14.03□□□□□ -0.16
PKP3-206ENST00000528036 RAB5BP61020 215 aa14.02□□□□□ -0.17
PKP3-206ENST00000528036 NDUFA5Q16718 116 aa14.02□□□□□ -0.17
PKP3-206ENST00000528036 TRAPPC1Q9Y5R8 145 aa14.02□□□□□ -0.17
PKP3-206ENST00000528036 LINC00614P0C842 121 aa14.01□□□□□ -0.17
PKP3-206ENST00000528036 ZNF861PO60384 105 aa14□□□□□ -0.17
PKP3-206ENST00000528036 MRPL55Q7Z7F7 128 aaKnown RBP14□□□□□ -0.17
PKP3-206ENST00000528036 ATP5LO75964 103 aa13.99□□□□□ -0.17
PKP3-206ENST00000528036 SNAPINO95295 136 aa13.99□□□□□ -0.17
PKP3-206ENST00000528036 RPL13AP40429 203 aaKnown RBP13.99□□□□□ -0.17
PKP3-206ENST00000528036 HBDP02042 147 aa13.98□□□□□ -0.17
PKP3-206ENST00000528036 IGLC3P0DOY3 106 aa13.98□□□□□ -0.17
PKP3-206ENST00000528036 SVBPQ8N300 66 aa13.98□□□□□ -0.17
PKP3-206ENST00000528036 SPINK8P0C7L1 97 aa13.97□□□□□ -0.17
PKP3-206ENST00000528036 PRR26Q8N8Z3 221 aa13.97□□□□□ -0.17
PKP3-206ENST00000528036 C18orf32Q8TCD1 76 aa13.97□□□□□ -0.17
PKP3-206ENST00000528036 SFTA2Q6UW10 78 aa13.96□□□□□ -0.17
PKP3-206ENST00000528036 APOC3P02656 99 aa13.95□□□□□ -0.18
PKP3-206ENST00000528036 NDUFA6P56556 154 aa13.95□□□□□ -0.18
PKP3-206ENST00000528036 UBR4Q5T4S7 5183 aa13.95□□□□□ -0.18
PKP3-206ENST00000528036 RPL28P46779 137 aaKnown RBP13.94□□□□□ -0.18
PKP3-206ENST00000528036 IGLV5-37A0A075B6J1 123 aa13.93□□□□□ -0.18
PKP3-206ENST00000528036 IGLV5-39A0A0G2JS06 123 aa13.93□□□□□ -0.18
PKP3-206ENST00000528036 KRTAP1-4P0C5Y4 121 aa13.93□□□□□ -0.18
PKP3-206ENST00000528036 A0A096LNJ9 63 aa13.92□□□□□ -0.18
PKP3-206ENST00000528036 BCE1O60756 84 aa13.92□□□□□ -0.18
PKP3-206ENST00000528036 COX17Q14061 63 aa13.91□□□□□ -0.18
PKP3-206ENST00000528036 NKAPP1Q8N9T2 125 aa13.91□□□□□ -0.18
PKP3-206ENST00000528036 URB1-AS1Q96HZ7 61 aa13.9□□□□□ -0.18
PKP3-206ENST00000528036 LINC00167Q96N53 147 aa13.9□□□□□ -0.18
PKP3-206ENST00000528036 ZNF22P17026 224 aaPredicted RBP13.89□□□□□ -0.19
PKP3-206ENST00000528036 BAGE3Q86Y29 109 aa13.88□□□□□ -0.19
PKP3-206ENST00000528036 CHCHD1Q96BP2 118 aaKnown RBP13.86□□□□□ -0.19
PKP3-206ENST00000528036 RPL24P83731 157 aaKnown RBP13.85□□□□□ -0.19
PKP3-206ENST00000528036 ERG28Q9UKR5 140 aa13.85□□□□□ -0.19
PKP3-206ENST00000528036 LRP2P98164 4655 aa13.84□□□□□ -0.19
PKP3-206ENST00000528036 PFN2P35080 140 aa13.84□□□□□ -0.19
PKP3-206ENST00000528036 TMEM170BQ5T4T1 132 aa13.84□□□□□ -0.19
PKP3-206ENST00000528036 RPL37AP8A6NKH3 93 aa13.83□□□□□ -0.2
PKP3-206ENST00000528036 PMCHL1Q16048 86 aa13.83□□□□□ -0.2
PKP3-206ENST00000528036 TRAV12-1A0A0B4J245 112 aa13.81□□□□□ -0.2
PKP3-206ENST00000528036 C11orf86A6NJI1 115 aa13.81□□□□□ -0.2
PKP3-206ENST00000528036 CHTOPQ9Y3Y2 248 aaKnown RBP13.81□□□□□ -0.2
PKP3-206ENST00000528036 GAGE10A6NGK3 116 aa13.8□□□□□ -0.2
PKP3-206ENST00000528036 SND1-IT1Q9HBX3 110 aa13.8□□□□□ -0.2
PKP3-206ENST00000528036 UBE2AP49459 152 aa13.79□□□□□ -0.2
PKP3-206ENST00000528036 CRYGAP11844 174 aa13.78□□□□□ -0.2
PKP3-206ENST00000528036 IFI27L1Q96BM0 104 aa13.78□□□□□ -0.2
PKP3-206ENST00000528036 YPEL4Q96NS1 127 aa13.78□□□□□ -0.2
PKP3-206ENST00000528036 VPREB1P12018 145 aa13.76□□□□□ -0.21
PKP3-206ENST00000528036 ZNF625Q96I27 306 aaPredicted RBP13.76□□□□□ -0.21
PKP3-206ENST00000528036 KRTAP13-1Q8IUC0 172 aa13.74□□□□□ -0.21
PKP3-206ENST00000528036 IGKV2-28A0A075B6P5 120 aa13.73□□□□□ -0.21
PKP3-206ENST00000528036 LINC00587B1AMM8 73 aa13.73□□□□□ -0.21
PKP3-206ENST00000528036 HSBP1O75506 76 aa13.73□□□□□ -0.21
PKP3-206ENST00000528036 IGKV2D-28P01615 120 aa13.73□□□□□ -0.21
PKP3-206ENST00000528036 TMEM223A0PJW6 202 aa13.72□□□□□ -0.21
PKP3-206ENST00000528036 FAM229BQ4G0N7 80 aa13.72□□□□□ -0.21
PKP3-206ENST00000528036 LINC00158P58513 81 aa13.71□□□□□ -0.21
PKP3-206ENST00000528036 TYMSOSQ8TAI1 123 aa13.71□□□□□ -0.21
PKP3-206ENST00000528036 ATP6V1G1O75348 118 aa13.69□□□□□ -0.22
PKP3-206ENST00000528036 HERV-K104P63124 156 aa13.69□□□□□ -0.22
PKP3-206ENST00000528036 TMEM126AQ9H061 195 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms