RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 HILS1P60008 231 aa8.85□□□□□ -0.99
CAPN1-208ENST00000527323 LOC100131303A0A0U1RQF7 123 aa8.85□□□□□ -0.99
CAPN1-208ENST00000527323 PFN2P35080 140 aa8.84□□□□□ -0.99
CAPN1-208ENST00000527323 C9orf153Q5TBE3 101 aa8.84□□□□□ -0.99
CAPN1-208ENST00000527323 LINC00337Q8N6G1 96 aa8.84□□□□□ -0.99
CAPN1-208ENST00000527323 TRAV25A0A0B4J276 109 aa8.84□□□□□ -0.99
CAPN1-208ENST00000527323 RPL28P46779 137 aaKnown RBP8.84□□□□□ -0.99
CAPN1-208ENST00000527323 OR13C6PQ8NH95 151 aa8.84□□□□□ -0.99
CAPN1-208ENST00000527323 WFDC10AQ9H1F0 79 aa8.84□□□□□ -0.99
CAPN1-208ENST00000527323 TRGV4A0A0C4DH28 118 aa8.83□□□□□ -1
CAPN1-208ENST00000527323 ATP5G1P05496 136 aa8.82□□□□□ -1
CAPN1-208ENST00000527323 SMIM11BQ8TCY0 68 aa8.82□□□□□ -1
CAPN1-208ENST00000527323 TMEM126AQ9H061 195 aa8.82□□□□□ -1
CAPN1-208ENST00000527323 C22orf24Q9Y442 160 aa8.82□□□□□ -1
CAPN1-208ENST00000527323 PAX4O43316 350 aa8.82□□□□□ -1
CAPN1-208ENST00000527323 RNASE1P07998 156 aaKnown RBP8.82□□□□□ -1
CAPN1-208ENST00000527323 FAM222AQ5U5X8 452 aa8.82□□□□□ -1
CAPN1-208ENST00000527323 CCL24O00175 119 aa8.82□□□□□ -1
CAPN1-208ENST00000527323 RPL35AP18077 110 aaKnown RBP8.82□□□□□ -1
CAPN1-208ENST00000527323 C5orf38Q86SI9 138 aa8.82□□□□□ -1
CAPN1-208ENST00000527323 IL17DQ8TAD2 202 aa8.82□□□□□ -1
CAPN1-208ENST00000527323 FAM110AQ9BQ89 295 aa8.82□□□□□ -1
CAPN1-208ENST00000527323 IGKV2-28A0A075B6P5 120 aa8.81□□□□□ -1
CAPN1-208ENST00000527323 A0A087WYN8 130 aa8.81□□□□□ -1
CAPN1-208ENST00000527323 IGKV2D-28P01615 120 aa8.81□□□□□ -1
CAPN1-208ENST00000527323 C3orf22Q8N5N4 141 aa8.81□□□□□ -1
CAPN1-208ENST00000527323 C11orf68Q9H3H3 251 aaKnown RBP8.81□□□□□ -1
CAPN1-208ENST00000527323 C14orf132Q9NPU4 83 aa8.81□□□□□ -1
CAPN1-208ENST00000527323 CCL18P55774 89 aa8.8□□□□□ -1
CAPN1-208ENST00000527323 OVOL2Q9BRP0 275 aa8.8□□□□□ -1
CAPN1-208ENST00000527323 IGLV4-60A0A075B6I1 120 aa8.79□□□□□ -1
CAPN1-208ENST00000527323 LECT2O14960 151 aa8.79□□□□□ -1
CAPN1-208ENST00000527323 SEC61GP60059 68 aa8.79□□□□□ -1
CAPN1-208ENST00000527323 SDIM1Q6ZPB5 146 aa8.79□□□□□ -1
CAPN1-208ENST00000527323 H0YGX0 51 aa8.78□□□□□ -1
CAPN1-208ENST00000527323 UQCRQO14949 82 aa8.78□□□□□ -1
CAPN1-208ENST00000527323 IGKV3D-7A0A0C4DH55 119 aa8.78□□□□□ -1
CAPN1-208ENST00000527323 CXCL5P42830 114 aa8.78□□□□□ -1
CAPN1-208ENST00000527323 C6orf226Q5I0X4 101 aa8.78□□□□□ -1
CAPN1-208ENST00000527323 C9orf129Q5T035 196 aaKnown RBP8.78□□□□□ -1
CAPN1-208ENST00000527323 SLPIP03973 132 aa8.77□□□□□ -1
CAPN1-208ENST00000527323 C16orf74Q96GX8 76 aa8.77□□□□□ -1.01
CAPN1-208ENST00000527323 TRBV6-4A0A1B0GX49 114 aa8.76□□□□□ -1.01
CAPN1-208ENST00000527323 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
CAPN1-208ENST00000527323 TRBV6-8A0A0A6YYG3 113 aa8.76□□□□□ -1.01
CAPN1-208ENST00000527323 IGHV3OR16-9A0A0B4J2B5 98 aa8.76□□□□□ -1.01
CAPN1-208ENST00000527323 IBA57-AS1B1ANH7 110 aa8.76□□□□□ -1.01
CAPN1-208ENST00000527323 NCR3O14931 201 aa8.75□□□□□ -1.01
CAPN1-208ENST00000527323 TMEM86BQ8N661 226 aa8.75□□□□□ -1.01
CAPN1-208ENST00000527323 LINC00526Q96FQ7 95 aa8.74□□□□□ -1.01
CAPN1-208ENST00000527323 GIG44P09565 113 aaPredicted RBP8.74□□□□□ -1.01
CAPN1-208ENST00000527323 A0A087WZ39 114 aa8.74□□□□□ -1.01
CAPN1-208ENST00000527323 DEFB130BP0DP73 79 aa8.74□□□□□ -1.01
CAPN1-208ENST00000527323 DEFB130AP0DP74 79 aa8.74□□□□□ -1.01
CAPN1-208ENST00000527323 COX7CP15954 63 aa8.74□□□□□ -1.01
CAPN1-208ENST00000527323 XCL1P47992 114 aa8.74□□□□□ -1.01
CAPN1-208ENST00000527323 KLK5Q9Y337 293 aaPredicted RBP8.74□□□□□ -1.01
CAPN1-208ENST00000527323 PLAC8L1A1L4L8 177 aa8.73□□□□□ -1.01
CAPN1-208ENST00000527323 LINC00846Q9NV44 126 aa8.73□□□□□ -1.01
CAPN1-208ENST00000527323 ATOX1O00244 68 aa8.73□□□□□ -1.01
CAPN1-208ENST00000527323 FHL2Q14192 279 aa8.72□□□□□ -1.01
CAPN1-208ENST00000527323 KRTAP24-1Q3LI83 254 aa8.72□□□□□ -1.01
CAPN1-208ENST00000527323 CLPSL2Q6UWE3 100 aa8.72□□□□□ -1.01
CAPN1-208ENST00000527323 LINC00959A0A1B0GUT2 108 aa8.72□□□□□ -1.01
CAPN1-208ENST00000527323 CMC4P56277 68 aaPredicted RBP8.72□□□□□ -1.01
CAPN1-208ENST00000527323 A0A1B0GX51 115 aa8.71□□□□□ -1.01
CAPN1-208ENST00000527323 ORMDL1Q9P0S3 153 aa8.71□□□□□ -1.01
CAPN1-208ENST00000527323 A0A087WVE0 104 aa8.7□□□□□ -1.02
CAPN1-208ENST00000527323 ANK2Q01484 3957 aa8.7□□□□□ -1.02
CAPN1-208ENST00000527323 hADV29S1A0JD25 119 aa8.7□□□□□ -1.02
CAPN1-208ENST00000527323 TENM3Q9P273 2699 aa8.7□□□□□ -1.02
CAPN1-208ENST00000527323 PRB2P02812 416 aaPredicted RBP8.69□□□□□ -1.02
CAPN1-208ENST00000527323 SS18Q15532 418 aa8.69□□□□□ -1.02
CAPN1-208ENST00000527323 LINC00482Q8N8I6 264 aa8.69□□□□□ -1.02
CAPN1-208ENST00000527323 HIST1H4AP62805 103 aaKnown RBP8.69□□□□□ -1.02
CAPN1-208ENST00000527323 PRR3P79522 188 aaKnown RBP8.69□□□□□ -1.02
CAPN1-208ENST00000527323 RPL18AQ02543 176 aaKnown RBP8.69□□□□□ -1.02
CAPN1-208ENST00000527323 A0A096LPF7 62 aa8.69□□□□□ -1.02
CAPN1-208ENST00000527323 Q6JHZ5 121 aa8.68□□□□□ -1.02
CAPN1-208ENST00000527323 C2orf48Q96LS8 159 aa8.68□□□□□ -1.02
CAPN1-208ENST00000527323 LOC107984640A0A0U1RRK4 108 aa8.68□□□□□ -1.02
CAPN1-208ENST00000527323 GYPEP15421 78 aa8.68□□□□□ -1.02
CAPN1-208ENST00000527323 C16orf95Q9H693 158 aa8.68□□□□□ -1.02
CAPN1-208ENST00000527323 OBSCN-AS1Q96MR7 158 aa8.67□□□□□ -1.02
CAPN1-208ENST00000527323 CSNK1G2-AS1Q8NCQ2 148 aa8.66□□□□□ -1.02
CAPN1-208ENST00000527323 CRYGAP11844 174 aa8.65□□□□□ -1.02
CAPN1-208ENST00000527323 USP17L23D6RBM5 183 aa8.64□□□□□ -1.03
CAPN1-208ENST00000527323 CCKP06307 115 aa8.64□□□□□ -1.03
CAPN1-208ENST00000527323 C19orf73Q9NVV2 129 aa8.64□□□□□ -1.03
CAPN1-208ENST00000527323 IGLV1-51P01701 117 aa8.64□□□□□ -1.03
CAPN1-208ENST00000527323 Q8IZM0 81 aa8.64□□□□□ -1.03
CAPN1-208ENST00000527323 SERP2Q8N6R1 65 aa8.64□□□□□ -1.03
CAPN1-208ENST00000527323 LINC01561Q8N1V8 128 aa8.63□□□□□ -1.03
CAPN1-208ENST00000527323 IGLV10-54A0A075B6I4 117 aa8.63□□□□□ -1.03
CAPN1-208ENST00000527323 DEFB4AO15263 64 aa8.63□□□□□ -1.03
CAPN1-208ENST00000527323 Q8N814 137 aa8.63□□□□□ -1.03
CAPN1-208ENST00000527323 JMJD7-PLA2G4BH0Y9G9 81 aa8.62□□□□□ -1.03
CAPN1-208ENST00000527323 J3KT08 172 aa8.62□□□□□ -1.03
CAPN1-208ENST00000527323 WFDC9Q8NEX5 89 aa8.62□□□□□ -1.03
CAPN1-208ENST00000527323 TMEM256-PLSCR3K7ERE1 68 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms