RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 CHTF8P0CG12 524 aa5.66□□□□□ -1.5
CCDC90B-208ENST00000527025 PMVKQ15126 192 aa5.66□□□□□ -1.5
CCDC90B-208ENST00000527025 C5orf38Q86SI9 138 aa5.66□□□□□ -1.5
CCDC90B-208ENST00000527025 IGLV4-69A0A075B6H9 119 aa5.65□□□□□ -1.5
CCDC90B-208ENST00000527025 IGLV5-45A0A087WSX0 123 aa5.65□□□□□ -1.5
CCDC90B-208ENST00000527025 A0A087WZ39 114 aa5.65□□□□□ -1.5
CCDC90B-208ENST00000527025 COX7A2LO14548 114 aa5.65□□□□□ -1.5
CCDC90B-208ENST00000527025 IFI27L1Q96BM0 104 aa5.65□□□□□ -1.5
CCDC90B-208ENST00000527025 FLG2Q5D862 2391 aaPredicted RBP5.64□□□□□ -1.51
CCDC90B-208ENST00000527025 TRAV12-1A0A0B4J245 112 aa5.64□□□□□ -1.51
CCDC90B-208ENST00000527025 IGHV1-58A0A0C4DH39 117 aa5.64□□□□□ -1.51
CCDC90B-208ENST00000527025 TINCRA0A1B0GVN0 87 aa5.64□□□□□ -1.51
CCDC90B-208ENST00000527025 LEPROTL1O95214 131 aa5.64□□□□□ -1.51
CCDC90B-208ENST00000527025 IGLC3P0DOY3 106 aa5.64□□□□□ -1.51
CCDC90B-208ENST00000527025 CIRBPQ14011 172 aaKnown RBP5.64□□□□□ -1.51
CCDC90B-208ENST00000527025 IGHV3-64A0A075B6Q5 118 aa5.63□□□□□ -1.51
CCDC90B-208ENST00000527025 INAFM2P0DMQ5 153 aa5.63□□□□□ -1.51
CCDC90B-208ENST00000527025 NDUFA6P56556 154 aa5.63□□□□□ -1.51
CCDC90B-208ENST00000527025 HERVK_113P63121 156 aa5.63□□□□□ -1.51
CCDC90B-208ENST00000527025 SEC11AP67812 179 aa5.63□□□□□ -1.51
CCDC90B-208ENST00000527025 CFAP161Q6P656 301 aa5.63□□□□□ -1.51
CCDC90B-208ENST00000527025 LINC01561Q8N1V8 128 aa5.63□□□□□ -1.51
CCDC90B-208ENST00000527025 PACRGQ96M98 296 aaPredicted RBP5.63□□□□□ -1.51
CCDC90B-208ENST00000527025 CDKN2A-AS1Q9UH64 79 aa5.63□□□□□ -1.51
CCDC90B-208ENST00000527025 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
CCDC90B-208ENST00000527025 C11orf86A6NJI1 115 aa5.62□□□□□ -1.51
CCDC90B-208ENST00000527025 SMIM1B2RUZ4 78 aa5.62□□□□□ -1.51
CCDC90B-208ENST00000527025 FABP4P15090 132 aa5.62□□□□□ -1.51
CCDC90B-208ENST00000527025 ZNF22P17026 224 aaPredicted RBP5.62□□□□□ -1.51
CCDC90B-208ENST00000527025 SPAG11BQ08648 103 aa5.62□□□□□ -1.51
CCDC90B-208ENST00000527025 KIAA0087Q14695 138 aa5.62□□□□□ -1.51
CCDC90B-208ENST00000527025 ODF1Q14990 250 aa5.62□□□□□ -1.51
CCDC90B-208ENST00000527025 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
CCDC90B-208ENST00000527025 HERC1Q15751 4861 aa5.62□□□□□ -1.51
CCDC90B-208ENST00000527025 MALP21145 153 aa5.61□□□□□ -1.51
CCDC90B-208ENST00000527025 LINC00469Q8N7U9 141 aa5.61□□□□□ -1.51
CCDC90B-208ENST00000527025 OR10D4PQ8NGN7 298 aa5.61□□□□□ -1.51
CCDC90B-208ENST00000527025 SPACA4Q8TDM5 124 aa5.61□□□□□ -1.51
CCDC90B-208ENST00000527025 ORAOV1Q8WV07 137 aa5.61□□□□□ -1.51
CCDC90B-208ENST00000527025 GEMIN7Q9H840 131 aaKnown RBP5.61□□□□□ -1.51
CCDC90B-208ENST00000527025 MRPL35Q9NZE8 188 aaKnown RBP5.61□□□□□ -1.51
CCDC90B-208ENST00000527025 HSPB8Q9UJY1 196 aa5.61□□□□□ -1.51
CCDC90B-208ENST00000527025 CHTOPQ9Y3Y2 248 aaKnown RBP5.61□□□□□ -1.51
CCDC90B-208ENST00000527025 A0A087WYN8 130 aa5.6□□□□□ -1.51
CCDC90B-208ENST00000527025 A0A096LNI7 61 aa5.6□□□□□ -1.51
CCDC90B-208ENST00000527025 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.6□□□□□ -1.51
CCDC90B-208ENST00000527025 F8VRH5 84 aa5.6□□□□□ -1.51
CCDC90B-208ENST00000527025 APOMO95445 188 aa5.6□□□□□ -1.51
CCDC90B-208ENST00000527025 HNRNPA3P51991 378 aaKnown RBP5.6□□□□□ -1.51
CCDC90B-208ENST00000527025 Q6ZRU5 148 aa5.6□□□□□ -1.51
CCDC90B-208ENST00000527025 HIST3H2BBQ8N257 126 aa5.6□□□□□ -1.51
CCDC90B-208ENST00000527025 C2orf48Q96LS8 159 aa5.6□□□□□ -1.51
CCDC90B-208ENST00000527025 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.51
CCDC90B-208ENST00000527025 C10orf25Q5T742 122 aa5.59□□□□□ -1.51
CCDC90B-208ENST00000527025 IGKV2-24A0A0C4DH68 120 aa5.58□□□□□ -1.52
CCDC90B-208ENST00000527025 SYS1-DBNDD2H3BUS1 97 aa5.58□□□□□ -1.52
CCDC90B-208ENST00000527025 ZNF561-AS1K7EIQ3 104 aa5.58□□□□□ -1.52
CCDC90B-208ENST00000527025 SPINK8P0C7L1 97 aa5.58□□□□□ -1.52
CCDC90B-208ENST00000527025 SYCNQ0VAF6 134 aa5.58□□□□□ -1.52
CCDC90B-208ENST00000527025 Q8IZM0 81 aa5.58□□□□□ -1.52
CCDC90B-208ENST00000527025 CARD19Q96LW7 228 aa5.58□□□□□ -1.52
CCDC90B-208ENST00000527025 PLAC8Q9NZF1 115 aa5.58□□□□□ -1.52
CCDC90B-208ENST00000527025 C5orf52A6NGY3 159 aa5.57□□□□□ -1.52
CCDC90B-208ENST00000527025 F8WDY8 70 aa5.57□□□□□ -1.52
CCDC90B-208ENST00000527025 H0Y8G0 127 aa5.57□□□□□ -1.52
CCDC90B-208ENST00000527025 PLA2G1BP04054 148 aaKnown RBP5.57□□□□□ -1.52
CCDC90B-208ENST00000527025 C3orf79P0CE67 100 aa5.57□□□□□ -1.52
CCDC90B-208ENST00000527025 CAMK2N2Q96S95 79 aa5.57□□□□□ -1.52
CCDC90B-208ENST00000527025 HIST1H2BLQ99880 126 aa5.57□□□□□ -1.52
CCDC90B-208ENST00000527025 PMCHL2Q9BQD1 86 aa5.57□□□□□ -1.52
CCDC90B-208ENST00000527025 MAP1LC3CQ9BXW4 147 aa5.57□□□□□ -1.52
CCDC90B-208ENST00000527025 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
CCDC90B-208ENST00000527025 TMEM223A0PJW6 202 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 H3BRM9 83 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 MAJINQ3KP22 176 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 TMEM170BQ5T4T1 132 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 LINC01545Q5VT33 79 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 PET117Q6UWS5 81 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 C2orf82Q6UX34 121 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 UNQ6190/PRO20217Q6UXQ8 127 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 DPH3Q96FX2 82 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 C6orf48Q9UBA6 75 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 PKHD1L1Q86WI1 4243 aa5.56□□□□□ -1.52
CCDC90B-208ENST00000527025 A0A1W2PNN7 141 aa5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 NDUFA1O15239 70 aa5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 DPM2O94777 84 aa5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 S100A6P06703 90 aa5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 PLNP26678 52 aa5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 SNRPEP62304 92 aaKnown RBP5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 RNF151Q2KHN1 245 aa5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 STPG4Q8N801 248 aa5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 COX7B2Q8TF08 81 aa5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 TOMM7Q9P0U1 55 aa5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 DMBT1Q9UGM3 2413 aaPredicted RBP5.55□□□□□ -1.52
CCDC90B-208ENST00000527025 IGKCP01834 107 aa5.54□□□□□ -1.52
CCDC90B-208ENST00000527025 PTTG1IPP53801 180 aa5.54□□□□□ -1.52
CCDC90B-208ENST00000527025 KRTDAPP60985 99 aa5.54□□□□□ -1.52
CCDC90B-208ENST00000527025 RPL37AP61513 92 aaKnown RBP5.54□□□□□ -1.52
CCDC90B-208ENST00000527025 KRTAP7-1Q8IUC3 87 aa5.54□□□□□ -1.52
CCDC90B-208ENST00000527025 TRBV30A0A0K0K1B3 111 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms