RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TRAV13-2A0A0B4J235 113 aa12.11□□□□□ -0.47
USH1C-205ENST00000527020 Q8N3U1 123 aa12.11□□□□□ -0.47
USH1C-205ENST00000527020 FAM218AQ96MZ4 157 aa12.11□□□□□ -0.47
USH1C-205ENST00000527020 PFN2P35080 140 aa12.1□□□□□ -0.47
USH1C-205ENST00000527020 DEFB121Q5J5C9 76 aa12.1□□□□□ -0.47
USH1C-205ENST00000527020 C11orf68Q9H3H3 251 aaKnown RBP12.1□□□□□ -0.47
USH1C-205ENST00000527020 CRPP02741 224 aa12.09□□□□□ -0.47
USH1C-205ENST00000527020 RPL28P46779 137 aaKnown RBP12.09□□□□□ -0.47
USH1C-205ENST00000527020 DAD1P61803 113 aa12.09□□□□□ -0.47
USH1C-205ENST00000527020 TRAV8-4A0A0B4J246 113 aa12.08□□□□□ -0.48
USH1C-205ENST00000527020 C6orf226Q5I0X4 101 aa12.08□□□□□ -0.48
USH1C-205ENST00000527020 Q8IZM0 81 aa12.08□□□□□ -0.48
USH1C-205ENST00000527020 LINC00269Q8N2A0 174 aa12.08□□□□□ -0.48
USH1C-205ENST00000527020 TRAV26-1A0A087WT03 109 aa12.07□□□□□ -0.48
USH1C-205ENST00000527020 TRACP01848 142 aa12.07□□□□□ -0.48
USH1C-205ENST00000527020 MIFP14174 115 aa12.07□□□□□ -0.48
USH1C-205ENST00000527020 LINC01561Q8N1V8 128 aa12.07□□□□□ -0.48
USH1C-205ENST00000527020 WFDC9Q8NEX5 89 aa12.07□□□□□ -0.48
USH1C-205ENST00000527020 ATP5G1P05496 136 aa12.05□□□□□ -0.48
USH1C-205ENST00000527020 C22orf24Q9Y442 160 aa12.05□□□□□ -0.48
USH1C-205ENST00000527020 WIPF1O43516 503 aa12.05□□□□□ -0.48
USH1C-205ENST00000527020 SMIM11BQ8TCY0 68 aa12.05□□□□□ -0.48
USH1C-205ENST00000527020 IGHV4-30-4P0DP06 118 aa12.04□□□□□ -0.48
USH1C-205ENST00000527020 KIAA0087Q14695 138 aa12.04□□□□□ -0.48
USH1C-205ENST00000527020 CD164L2Q6UWJ8 174 aa12.04□□□□□ -0.48
USH1C-205ENST00000527020 ANGP03950 147 aaKnown RBP12.03□□□□□ -0.48
USH1C-205ENST00000527020 CHCHD10Q8WYQ3 142 aaPredicted RBP12.03□□□□□ -0.48
USH1C-205ENST00000527020 REG3AQ06141 175 aa12.02□□□□□ -0.48
USH1C-205ENST00000527020 IGLV10-54A0A075B6I4 117 aa12.02□□□□□ -0.49
USH1C-205ENST00000527020 SPART-AS1P0CW21 52 aa12.02□□□□□ -0.49
USH1C-205ENST00000527020 FAM240AA0A1B0GVK7 77 aa12.01□□□□□ -0.49
USH1C-205ENST00000527020 BAALC-AS2P0C853 105 aa12.01□□□□□ -0.49
USH1C-205ENST00000527020 Q9HAA7 133 aa12□□□□□ -0.49
USH1C-205ENST00000527020 HTN3P15516 51 aa11.99□□□□□ -0.49
USH1C-205ENST00000527020 CKS1BP61024 79 aa11.99□□□□□ -0.49
USH1C-205ENST00000527020 A0A087WYN8 130 aa11.99□□□□□ -0.49
USH1C-205ENST00000527020 MRPL23Q16540 153 aaKnown RBP11.99□□□□□ -0.49
USH1C-205ENST00000527020 A0A1B0GV72 72 aa11.98□□□□□ -0.49
USH1C-205ENST00000527020 C15orf53Q8NAA6 179 aa11.98□□□□□ -0.49
USH1C-205ENST00000527020 SNCGO76070 127 aa11.97□□□□□ -0.49
USH1C-205ENST00000527020 LELP1Q5T871 98 aa11.97□□□□□ -0.49
USH1C-205ENST00000527020 OR13C6PQ8NH95 151 aa11.95□□□□□ -0.5
USH1C-205ENST00000527020 CXCL5P42830 114 aa11.95□□□□□ -0.5
USH1C-205ENST00000527020 CFAP161Q6P656 301 aa11.95□□□□□ -0.5
USH1C-205ENST00000527020 H0YGX0 51 aa11.94□□□□□ -0.5
USH1C-205ENST00000527020 MALP21145 153 aa11.94□□□□□ -0.5
USH1C-205ENST00000527020 C9orf116Q5BN46 136 aaPredicted RBP11.94□□□□□ -0.5
USH1C-205ENST00000527020 COX17Q14061 63 aa11.94□□□□□ -0.5
USH1C-205ENST00000527020 TTC32Q5I0X7 151 aa11.94□□□□□ -0.5
USH1C-205ENST00000527020 NANOS2P60321 138 aaKnown RBP11.93□□□□□ -0.5
USH1C-205ENST00000527020 PRR3P79522 188 aaKnown RBP11.93□□□□□ -0.5
USH1C-205ENST00000527020 PRR34Q9NV39 138 aa11.93□□□□□ -0.5
USH1C-205ENST00000527020 GAGE2BQ13066 116 aa11.92□□□□□ -0.5
USH1C-205ENST00000527020 GAGE2EQ4V326 116 aa11.92□□□□□ -0.5
USH1C-205ENST00000527020 OXLD1Q5BKU9 147 aa11.92□□□□□ -0.5
USH1C-205ENST00000527020 GAGE2DQ9UEU5 116 aa11.92□□□□□ -0.5
USH1C-205ENST00000527020 KRTAP10-11P60412 298 aa11.92□□□□□ -0.5
USH1C-205ENST00000527020 CMYA5Q8N3K9 4069 aa11.91□□□□□ -0.5
USH1C-205ENST00000527020 Q6Q795 121 aa11.91□□□□□ -0.5
USH1C-205ENST00000527020 Q8NDZ9 215 aa11.91□□□□□ -0.5
USH1C-205ENST00000527020 KLK12Q9UKR0 248 aa11.91□□□□□ -0.5
USH1C-205ENST00000527020 KLK5Q9Y337 293 aaPredicted RBP11.91□□□□□ -0.5
USH1C-205ENST00000527020 LECT2O14960 151 aa11.9□□□□□ -0.5
USH1C-205ENST00000527020 NDUFC2O95298 119 aa11.9□□□□□ -0.5
USH1C-205ENST00000527020 C10orf25Q5T742 122 aa11.9□□□□□ -0.5
USH1C-205ENST00000527020 LYPD5Q6UWN5 251 aa11.9□□□□□ -0.5
USH1C-205ENST00000527020 ENHOQ6UWT2 76 aa11.9□□□□□ -0.5
USH1C-205ENST00000527020 C6orf223Q8N319 242 aa11.9□□□□□ -0.5
USH1C-205ENST00000527020 RETNQ9HD89 108 aa11.9□□□□□ -0.5
USH1C-205ENST00000527020 DNAL4O96015 105 aa11.89□□□□□ -0.51
USH1C-205ENST00000527020 C9orf129Q5T035 196 aaKnown RBP11.89□□□□□ -0.51
USH1C-205ENST00000527020 ACYP1P07311 99 aa11.89□□□□□ -0.51
USH1C-205ENST00000527020 F8P00451 2351 aa11.88□□□□□ -0.51
USH1C-205ENST00000527020 SPAG11BQ08648 103 aa11.88□□□□□ -0.51
USH1C-205ENST00000527020 UNQ6190/PRO20217Q6UXQ8 127 aa11.88□□□□□ -0.51
USH1C-205ENST00000527020 SMCR5Q8TEV8 140 aa11.88□□□□□ -0.51
USH1C-205ENST00000527020 LINC00526Q96FQ7 95 aa11.88□□□□□ -0.51
USH1C-205ENST00000527020 ANK2Q01484 3957 aa11.88□□□□□ -0.51
USH1C-205ENST00000527020 PKD1L1Q8TDX9 2849 aa11.87□□□□□ -0.51
USH1C-205ENST00000527020 NHLRC4P0CG21 123 aaPredicted RBP11.86□□□□□ -0.51
USH1C-205ENST00000527020 SLPIP03973 132 aa11.85□□□□□ -0.51
USH1C-205ENST00000527020 INAFM2P0DMQ5 153 aa11.85□□□□□ -0.51
USH1C-205ENST00000527020 SDIM1Q6ZPB5 146 aa11.85□□□□□ -0.51
USH1C-205ENST00000527020 OBSCN-AS1Q96MR7 158 aa11.85□□□□□ -0.51
USH1C-205ENST00000527020 ANAPC13Q9BS18 74 aa11.85□□□□□ -0.51
USH1C-205ENST00000527020 CYSRT1A8MQ03 144 aa11.84□□□□□ -0.51
USH1C-205ENST00000527020 NDUFV3P56181 108 aaKnown RBP11.84□□□□□ -0.51
USH1C-205ENST00000527020 FBN1P35555 2871 aaKnown RBP11.84□□□□□ -0.51
USH1C-205ENST00000527020 A0A0J9YWU9 116 aa11.84□□□□□ -0.51
USH1C-205ENST00000527020 TRBV7-7A0A0K0K1E9 115 aa11.83□□□□□ -0.52
USH1C-205ENST00000527020 TMEM126AQ9H061 195 aa11.83□□□□□ -0.52
USH1C-205ENST00000527020 NCR3O14931 201 aa11.82□□□□□ -0.52
USH1C-205ENST00000527020 KRTAP24-1Q3LI83 254 aa11.82□□□□□ -0.52
USH1C-205ENST00000527020 KPRPQ5T749 579 aaPredicted RBP11.82□□□□□ -0.52
USH1C-205ENST00000527020 WFDC10BQ8IUB3 73 aa11.82□□□□□ -0.52
USH1C-205ENST00000527020 LINC00167Q96N53 147 aa11.82□□□□□ -0.52
USH1C-205ENST00000527020 TENM3Q9P273 2699 aa11.82□□□□□ -0.52
USH1C-205ENST00000527020 EGFEM1PQ0D2K5 195 aa11.82□□□□□ -0.52
USH1C-205ENST00000527020 H3BNG1 76 aa11.81□□□□□ -0.52
USH1C-205ENST00000527020 Q6ZTC4 211 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms