RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 HTN1P15515 57 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 RNASE4P34096 147 aaKnown RBP2.13□□□□□ -2.07
CD44-219ENST00000525685 ZNF80P51504 273 aaPredicted RBP2.13□□□□□ -2.07
CD44-219ENST00000525685 CCL20P78556 96 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 TTC32Q5I0X7 151 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 Q6ZUT4 128 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 PRNTQ86SH4 94 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 ATP6V0E2Q8NHE4 81 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 FMC1Q96HJ9 113 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 AP1S3Q96PC3 154 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 LINC00467Q9BRT7 94 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 EPDR1Q9UM22 224 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 LENEPQ9Y5L5 61 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 KMT2CQ8NEZ4 4911 aaKnown RBP2.12□□□□□ -2.07
CD44-219ENST00000525685 DEFB131BA0A096LNP1 70 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 TRAV21A0A0B4J279 112 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 TRBV6-1A0A0K0K1D8 114 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 LCE6AA0A183 80 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 TMEM262E9PQX1 116 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 F8W1H4 67 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 H7C1H1 209 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 J3QQQ9 107 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 SPINK4O60575 86 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 LTAP01374 205 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 P01737 135 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 SFTA3P0C7M3 94 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 DEFB130BP0DP73 79 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 DEFB130AP0DP74 79 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 HTN3P15516 51 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 PFN2P35080 140 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 HINT1P49773 126 aaPredicted RBP2.12□□□□□ -2.07
CD44-219ENST00000525685 DAD1P61803 113 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 UBE2G1P62253 170 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 SEC11AP67812 179 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 Q0VG73 95 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 ADIRFQ15847 76 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 Q6ZRU5 148 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 Q6ZTI0 123 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 ATOH7Q8N100 152 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 CIRBP-AS1Q8TBR5 109 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 ZC2HC1AQ96GY0 325 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 CARD19Q96LW7 228 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 SMDT1Q9H4I9 107 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 ST20Q9HBF5 79 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 NOP10Q9NPE3 64 aaKnown RBP2.12□□□□□ -2.07
CD44-219ENST00000525685 MANBALQ9NQG1 85 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 GNG13Q9P2W3 67 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 APLNQ9ULZ1 77 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 KLK5Q9Y337 293 aaPredicted RBP2.12□□□□□ -2.07
CD44-219ENST00000525685 TIMM8BQ9Y5J9 83 aaPredicted RBP2.12□□□□□ -2.07
CD44-219ENST00000525685 COL7A1Q02388 2944 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 DNAH6Q9C0G6 4158 aa2.12□□□□□ -2.07
CD44-219ENST00000525685 TENM3Q9P273 2699 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 TRBV24-1A0A075B6N3 115 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 TRGV1A0A0A0MS02 117 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 TRAV8-6A0A0B4J262 113 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 A0A0J9YXV3 536 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 IGLL5B9A064 214 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 TMEM250H0YL14 139 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 H3BRM9 83 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 GNRH2O43555 120 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 SH2D1AO60880 128 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 IGLV2-8P01709 118 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 MT-ATP8P03928 68 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 TRGC2P03986 189 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 ATP5G1P05496 136 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 CRIP1P50238 77 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 KRTAP10-10P60014 251 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 TMEM258P61165 79 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 HERVK_113P63121 156 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 ELOBQ15370 118 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 LYRM7Q5U5X0 104 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 ANKRD29Q8N6D5 301 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 DPH3Q96FX2 82 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 KCNS1Q96KK3 526 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 C18orf15Q96N68 181 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 LYSTQ99698 3801 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 TXNDC17Q9BRA2 123 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 GNB1LQ9BYB4 327 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 TMEM242Q9NWH2 141 aa2.11□□□□□ -2.07
CD44-219ENST00000525685 VPS13DQ5THJ4 4388 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 TRBV20OR9-2A0A075B6H5 130 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 TRGV2A0A075B6R0 118 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 TMSB15BA0A087X1C1 80 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 TRAV4A0A0B4J268 109 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 FAM236AA0A1B0GUQ0 79 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 FAM236BA0A1B0GV22 79 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 H3BVH4 76 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 UQCRQO14949 82 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 IGHV3-53P01767 116 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 RNASE3P12724 160 aaKnown RBP2.1□□□□□ -2.07
CD44-219ENST00000525685 ASIPP42127 132 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 FOXA3P55318 350 aaPredicted RBP2.1□□□□□ -2.07
CD44-219ENST00000525685 LGALS9BQ3B8N2 356 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 SPATA45Q537H7 98 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 CENPWQ5EE01 88 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 BVES-AS1Q5T3Y7 98 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 LGALS9CQ6DKI2 356 aa2.1□□□□□ -2.07
CD44-219ENST00000525685 DAZ4Q86SG3 579 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms