RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 S100A16Q96FQ6 103 aaKnown RBP0.51□□□□□ -2.33
COPB1-203ENST00000525214 PSENENQ9NZ42 101 aa0.51□□□□□ -2.33
COPB1-203ENST00000525214 RABAC1Q9UI14 185 aa0.51□□□□□ -2.33
COPB1-203ENST00000525214 NRXN1Q9ULB1 1477 aa0.51□□□□□ -2.33
COPB1-203ENST00000525214 PIEZO2Q9H5I5 2752 aa0.51□□□□□ -2.33
COPB1-203ENST00000525214 ZFYVE26Q68DK2 2539 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 NAV2Q8IVL1 2488 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 RGPD3A6NKT7 1758 aaPredicted RBP0.5□□□□□ -2.33
COPB1-203ENST00000525214 MON2Q7Z3U7 1717 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 POLA1P09884 1462 aaPredicted RBP0.5□□□□□ -2.33
COPB1-203ENST00000525214 C1orf167Q5SNV9 1468 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 PLIN4Q96Q06 1357 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 F8WEM9 126 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 CYB5AP00167 134 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 ARMS2P0C7Q2 107 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 PIGYQ3MUY2 71 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 ETDBQ3ZM63 59 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 LINC01600Q96MT4 127 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 PRO0255Q9UI72 69 aa0.5□□□□□ -2.33
COPB1-203ENST00000525214 NLRP1Q9C000 1473 aa0.49□□□□□ -2.33
COPB1-203ENST00000525214 CELSR2Q9HCU4 2923 aa0.49□□□□□ -2.33
COPB1-203ENST00000525214 EDC4Q6P2E9 1401 aaKnown RBP0.49□□□□□ -2.33
COPB1-203ENST00000525214 TRBV7-4A0A0J9YYF1 115 aa0.49□□□□□ -2.33
COPB1-203ENST00000525214 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
COPB1-203ENST00000525214 TDRG1Q3Y452 100 aa0.49□□□□□ -2.33
COPB1-203ENST00000525214 DEFB107AQ8IZN7 70 aa0.49□□□□□ -2.33
COPB1-203ENST00000525214 TP53AIP1Q9HCN2 124 aa0.49□□□□□ -2.33
COPB1-203ENST00000525214 XRN1Q8IZH2 1706 aaKnown RBP0.49□□□□□ -2.33
COPB1-203ENST00000525214 CUX1P39880 1505 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 SPTA1P02549 2419 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 A0A0G2JMZ2 1700 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 KNDC1Q76NI1 1749 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 D6R8Y8 96 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 H0Y9P7 68 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 LEPROTL1O95214 131 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 PEA15Q15121 130 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 SPINK6Q6UWN8 80 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 MUSTN1Q8IVN3 82 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 SHPRHQ149N8 1683 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 LAMC1P11047 1609 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 MYO3AQ8NEV4 1616 aa0.48□□□□□ -2.33
COPB1-203ENST00000525214 UACAQ9BZF9 1416 aa0.47□□□□□ -2.33
COPB1-203ENST00000525214 GNGT1P63211 74 aa0.47□□□□□ -2.33
COPB1-203ENST00000525214 Q8IZM0 81 aa0.47□□□□□ -2.33
COPB1-203ENST00000525214 SETBP1Q9Y6X0 1596 aa0.47□□□□□ -2.33
COPB1-203ENST00000525214 TULP4Q9NRJ4 1543 aa0.47□□□□□ -2.33
COPB1-203ENST00000525214 PPLO60437 1756 aa0.47□□□□□ -2.33
COPB1-203ENST00000525214 MED14O60244 1454 aa0.47□□□□□ -2.33
COPB1-203ENST00000525214 CCDC141Q6ZP82 1450 aa0.47□□□□□ -2.33
COPB1-203ENST00000525214 BIVM-ERCC5R4GMW8 1640 aa0.46□□□□□ -2.34
COPB1-203ENST00000525214 NCOR1O75376 2440 aa0.46□□□□□ -2.34
COPB1-203ENST00000525214 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.46□□□□□ -2.34
COPB1-203ENST00000525214 I3L2K1 104 aa0.46□□□□□ -2.34
COPB1-203ENST00000525214 HMGN2P05204 90 aaKnown RBP0.46□□□□□ -2.34
COPB1-203ENST00000525214 NMSQ5H8A3 153 aa0.46□□□□□ -2.34
COPB1-203ENST00000525214 DEFB123Q8N688 67 aa0.46□□□□□ -2.34
COPB1-203ENST00000525214 CHD6Q8TD26 2715 aa0.46□□□□□ -2.34
COPB1-203ENST00000525214 CCDC18Q5T9S5 1454 aa0.46□□□□□ -2.34
COPB1-203ENST00000525214 CNOT1A5YKK6 2376 aaKnown RBP0.46□□□□□ -2.34
COPB1-203ENST00000525214 PAPPAQ13219 1627 aa0.46□□□□□ -2.34
COPB1-203ENST00000525214 TARBP1Q13395 1621 aaKnown RBP0.46□□□□□ -2.34
COPB1-203ENST00000525214 CSMD3Q7Z407 3707 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 ATRQ13535 2644 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 UNC79Q9P2D8 2635 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 UBR1Q8IWV7 1749 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 A0A1B0GU69 56 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 LINC00959A0A1B0GUT2 108 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 IQCF6A8MYZ5 107 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 SNRPFP62306 86 aaKnown RBP0.45□□□□□ -2.34
COPB1-203ENST00000525214 WFDC2Q14508 124 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 C6orf201Q7Z4U5 140 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 S100A13Q99584 98 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 MAP3K4Q9Y6R4 1608 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 UBR5O95071 2799 aaPredicted RBP0.45□□□□□ -2.34
COPB1-203ENST00000525214 PAPPA2Q9BXP8 1791 aa0.45□□□□□ -2.34
COPB1-203ENST00000525214 CRYBG1Q9Y4K1 1723 aa0.44□□□□□ -2.34
COPB1-203ENST00000525214 SYNE2Q8WXH0 6885 aaKnown RBP0.44□□□□□ -2.34
COPB1-203ENST00000525214 NEXMIFQ5QGS0 1516 aa0.44□□□□□ -2.34
COPB1-203ENST00000525214 C5P01031 1676 aa0.44□□□□□ -2.34
COPB1-203ENST00000525214 PRH1P02810 166 aa0.44□□□□□ -2.34
COPB1-203ENST00000525214 ACYP1P07311 99 aa0.44□□□□□ -2.34
COPB1-203ENST00000525214 IGLC3P0DOY3 106 aa0.44□□□□□ -2.34
COPB1-203ENST00000525214 Q5BKY6 102 aa0.44□□□□□ -2.34
COPB1-203ENST00000525214 LINC00643Q86TS7 51 aa0.44□□□□□ -2.34
COPB1-203ENST00000525214 USMG5Q96IX5 58 aa0.44□□□□□ -2.34
COPB1-203ENST00000525214 CSPG4Q6UVK1 2322 aa0.44□□□□□ -2.34
COPB1-203ENST00000525214 LRRC9Q6ZRR7 1453 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 MAGI2Q86UL8 1455 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 KIF14Q15058 1648 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 NHSL1Q5SYE7 1610 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 FXYD6-FXYD2A0A087WZ82 144 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 KANTRA0A1W2PQU2 76 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 IGLC2P0DOY2 106 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 PLGLAQ15195 96 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 SMR3AQ99954 134 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 UBE2D4Q9Y2X8 147 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 SAMD9Q5K651 1589 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 IGSF10Q6WRI0 2623 aa0.43□□□□□ -2.34
COPB1-203ENST00000525214 OTOGQ6ZRI0 2925 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms