RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 ADIRFQ15847 76 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 HIGD2BQ4VC39 106 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 C20orf203Q8NBC4 194 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 RNF185Q96GF1 192 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 AP1S3Q96PC3 154 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 TMEM243Q9BU79 118 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 PLAC8Q9NZF1 115 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 GNG13Q9P2W3 67 aa3.28□□□□□ -1.88
CTNNA1-239ENST00000523685 TRAV8-4A0A0B4J246 113 aa3.27□□□□□ -1.89
CTNNA1-239ENST00000523685 K7ERU9 68 aa3.27□□□□□ -1.89
CTNNA1-239ENST00000523685 SNAI2O43623 268 aa3.27□□□□□ -1.89
CTNNA1-239ENST00000523685 P01737 135 aa3.27□□□□□ -1.89
CTNNA1-239ENST00000523685 IGLC3P0DOY3 106 aa3.27□□□□□ -1.89
CTNNA1-239ENST00000523685 PRR3P79522 188 aaKnown RBP3.27□□□□□ -1.89
CTNNA1-239ENST00000523685 BATFQ16520 125 aa3.27□□□□□ -1.89
CTNNA1-239ENST00000523685 BAGE2Q86Y30 109 aa3.27□□□□□ -1.89
CTNNA1-239ENST00000523685 LINC01600Q96MT4 127 aa3.27□□□□□ -1.89
CTNNA1-239ENST00000523685 LAMTOR2Q9Y2Q5 125 aa3.27□□□□□ -1.89
CTNNA1-239ENST00000523685 H7C1H1 209 aa3.26□□□□□ -1.89
CTNNA1-239ENST00000523685 M0QY20 66 aa3.26□□□□□ -1.89
CTNNA1-239ENST00000523685 MT-ND6P03923 174 aa3.26□□□□□ -1.89
CTNNA1-239ENST00000523685 OR5AL1P0C617 328 aa3.26□□□□□ -1.89
CTNNA1-239ENST00000523685 SCGB1A1P11684 91 aa3.26□□□□□ -1.89
CTNNA1-239ENST00000523685 COX19Q49B96 90 aa3.26□□□□□ -1.89
CTNNA1-239ENST00000523685 OCIAD2Q56VL3 154 aa3.26□□□□□ -1.89
CTNNA1-239ENST00000523685 REG3GQ6UW15 175 aa3.26□□□□□ -1.89
CTNNA1-239ENST00000523685 C15orf56Q8N910 161 aa3.26□□□□□ -1.89
CTNNA1-239ENST00000523685 TRAPPC1Q9Y5R8 145 aa3.26□□□□□ -1.89
CTNNA1-239ENST00000523685 A0A096LNI7 61 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 A0A0J9YXV3 536 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 PDE6DO43924 150 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 SERF1AO75920 110 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 PMCHL1Q16048 86 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 SPATA45Q537H7 98 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 AMMECR1LQ6DCA0 310 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 RNASEKQ6P5S7 137 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 RASL11AQ6T310 242 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 Q6ZN92 141 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 FER1L6-AS1Q8NA97 138 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 CHCHD10Q8WYQ3 142 aaPredicted RBP3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 LINC00526Q96FQ7 95 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 VPS25Q9BRG1 176 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 CST9LQ9H4G1 147 aa3.25□□□□□ -1.89
CTNNA1-239ENST00000523685 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.24□□□□□ -1.89
CTNNA1-239ENST00000523685 A0A0U1RRA0 63 aa3.24□□□□□ -1.89
CTNNA1-239ENST00000523685 IGKV2-29A2NJV5 120 aaPredicted RBP3.24□□□□□ -1.89
CTNNA1-239ENST00000523685 NUPR1O60356 82 aa3.24□□□□□ -1.89
CTNNA1-239ENST00000523685 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
CTNNA1-239ENST00000523685 SPINK6Q6UWN8 80 aa3.24□□□□□ -1.89
CTNNA1-239ENST00000523685 GVQW2A0A096LPI5 108 aaPredicted RBP3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 TRAV26-2A0A0B4J265 109 aa3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 IGLC6P0CF74 106 aa3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 XCL1P47992 114 aa3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 DSCR10P59022 87 aa3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 CACNG7P62955 275 aa3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 CENPWQ5EE01 88 aa3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 LYZL1Q6UWQ5 148 aa3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 PGLYRP4Q96LB8 373 aa3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 GNB1LQ9BYB4 327 aa3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 ST20Q9HBF5 79 aa3.23□□□□□ -1.89
CTNNA1-239ENST00000523685 TAX1BP3O14907 124 aa3.22□□□□□ -1.89
CTNNA1-239ENST00000523685 NTF3P20783 257 aa3.22□□□□□ -1.89
CTNNA1-239ENST00000523685 KRTDAPP60985 99 aa3.22□□□□□ -1.89
CTNNA1-239ENST00000523685 VAMP3Q15836 100 aa3.22□□□□□ -1.89
CTNNA1-239ENST00000523685 LINC00242Q5T6M2 205 aa3.22□□□□□ -1.89
CTNNA1-239ENST00000523685 MRPL54Q6P161 138 aaKnown RBP3.22□□□□□ -1.89
CTNNA1-239ENST00000523685 BAGE3Q86Y29 109 aa3.22□□□□□ -1.89
CTNNA1-239ENST00000523685 RPL39LQ96EH5 51 aaKnown RBP3.22□□□□□ -1.89
CTNNA1-239ENST00000523685 CARD19Q96LW7 228 aa3.22□□□□□ -1.89
CTNNA1-239ENST00000523685 LINC00474Q9P2X8 69 aa3.22□□□□□ -1.89
CTNNA1-239ENST00000523685 A0A1B0GV72 72 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 FAM231BA6NCW3 169 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 F2Z2F3 143 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 APCSP02743 223 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 C3orf79P0CE67 100 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 FGF6P10767 208 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 HINT1P49773 126 aaPredicted RBP3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 GNG4P50150 75 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 BVES-AS1Q5T3Y7 98 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 GATD1Q8NB37 220 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 TMEM101Q96IK0 257 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 PKIGQ9Y2B9 76 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 LPAP08519 4548 aa3.21□□□□□ -1.9
CTNNA1-239ENST00000523685 TRBV20OR9-2A0A075B6H5 130 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 IGHV1-58A0A0C4DH39 117 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 LINC00959A0A1B0GUT2 108 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 A0A1W2PNN7 141 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 C19orf71A6NCJ1 209 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 SDHAF1A6NFY7 115 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 PMCHP20382 165 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 FOXA3P55318 350 aaPredicted RBP3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 SEC11AP67812 179 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 SYCNQ0VAF6 134 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 SS18Q15532 418 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 C1orf137Q5JT78 98 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 TMEM136Q6ZRR5 245 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 OR5A1Q8NGJ0 315 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 DHRS4-AS1Q9P1J3 65 aa3.2□□□□□ -1.9
CTNNA1-239ENST00000523685 IGLV4-69A0A075B6H9 119 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms