RNA–Protein interactions for RNA: ENST00000523262.5

CSGALNACT1-213, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-213ENST00000523262 PACRGQ96M98 296 aaPredicted RBP9.63□□□□□ -0.87
CSGALNACT1-213ENST00000523262 LOC389332A0A1B0GUA5 103 aa9.62□□□□□ -0.87
CSGALNACT1-213ENST00000523262 LINC01549A6NIU2 74 aa9.62□□□□□ -0.87
CSGALNACT1-213ENST00000523262 HSBP1O75506 76 aa9.62□□□□□ -0.87
CSGALNACT1-213ENST00000523262 SERF1AO75920 110 aa9.62□□□□□ -0.87
CSGALNACT1-213ENST00000523262 IFI27P40305 119 aaPredicted RBP9.62□□□□□ -0.87
CSGALNACT1-213ENST00000523262 SNRPEP62304 92 aaKnown RBP9.62□□□□□ -0.87
CSGALNACT1-213ENST00000523262 FAM19A5Q7Z5A7 132 aaPredicted RBP9.62□□□□□ -0.87
CSGALNACT1-213ENST00000523262 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
CSGALNACT1-213ENST00000523262 UBE2D1P51668 147 aa9.61□□□□□ -0.87
CSGALNACT1-213ENST00000523262 ORMDL2Q53FV1 153 aa9.61□□□□□ -0.87
CSGALNACT1-213ENST00000523262 TLX1NBP0CAT3 122 aa9.6□□□□□ -0.87
CSGALNACT1-213ENST00000523262 S100A2P29034 98 aa9.6□□□□□ -0.87
CSGALNACT1-213ENST00000523262 UBE2BP63146 152 aa9.6□□□□□ -0.87
CSGALNACT1-213ENST00000523262 GAGE2EQ4V326 116 aa9.6□□□□□ -0.87
CSGALNACT1-213ENST00000523262 SPANXA1Q9NS26 97 aa9.6□□□□□ -0.87
CSGALNACT1-213ENST00000523262 GAGE2DQ9UEU5 116 aa9.6□□□□□ -0.87
CSGALNACT1-213ENST00000523262 LPAP08519 4548 aa9.6□□□□□ -0.87
CSGALNACT1-213ENST00000523262 IGHV3OR16-9A0A0B4J2B5 98 aa9.59□□□□□ -0.87
CSGALNACT1-213ENST00000523262 RPL39P62891 51 aaKnown RBP9.59□□□□□ -0.87
CSGALNACT1-213ENST00000523262 PRR4Q16378 134 aa9.59□□□□□ -0.87
CSGALNACT1-213ENST00000523262 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
CSGALNACT1-213ENST00000523262 HIST3H2BBQ8N257 126 aa9.59□□□□□ -0.87
CSGALNACT1-213ENST00000523262 URB1-AS1Q96HZ7 61 aa9.59□□□□□ -0.87
CSGALNACT1-213ENST00000523262 IFITM10A6NMD0 228 aa9.58□□□□□ -0.88
CSGALNACT1-213ENST00000523262 RPL13AP40429 203 aaKnown RBP9.58□□□□□ -0.88
CSGALNACT1-213ENST00000523262 LINC00310P59036 64 aa9.58□□□□□ -0.88
CSGALNACT1-213ENST00000523262 C10orf25Q5T742 122 aa9.58□□□□□ -0.88
CSGALNACT1-213ENST00000523262 C6orf48Q9UBA6 75 aa9.58□□□□□ -0.88
CSGALNACT1-213ENST00000523262 M0QXV9 152 aa9.57□□□□□ -0.88
CSGALNACT1-213ENST00000523262 NUPR1O60356 82 aa9.57□□□□□ -0.88
CSGALNACT1-213ENST00000523262 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
CSGALNACT1-213ENST00000523262 KRTAP11-1Q8IUC1 163 aa9.57□□□□□ -0.88
CSGALNACT1-213ENST00000523262 HBDP02042 147 aa9.55□□□□□ -0.88
CSGALNACT1-213ENST00000523262 KRTAP1-4P0C5Y4 121 aa9.55□□□□□ -0.88
CSGALNACT1-213ENST00000523262 A0A0U1RQV1 116 aa9.54□□□□□ -0.88
CSGALNACT1-213ENST00000523262 HSPB8Q9UJY1 196 aa9.54□□□□□ -0.88
CSGALNACT1-213ENST00000523262 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
CSGALNACT1-213ENST00000523262 FAM19A2Q8N3H0 131 aa9.53□□□□□ -0.88
CSGALNACT1-213ENST00000523262 FAM104AQ969W3 186 aa9.53□□□□□ -0.88
CSGALNACT1-213ENST00000523262 HIST1H2BLQ99880 126 aa9.53□□□□□ -0.88
CSGALNACT1-213ENST00000523262 NDUFC2-KCTD14E9PQ53 114 aa9.52□□□□□ -0.89
CSGALNACT1-213ENST00000523262 LEPROTL1O95214 131 aa9.52□□□□□ -0.89
CSGALNACT1-213ENST00000523262 PDZD11Q5EBL8 140 aa9.52□□□□□ -0.89
CSGALNACT1-213ENST00000523262 TOMM6Q96B49 74 aa9.52□□□□□ -0.89
CSGALNACT1-213ENST00000523262 CYSLTR1Q9Y271 337 aa9.52□□□□□ -0.89
CSGALNACT1-213ENST00000523262 ATP5LO75964 103 aa9.51□□□□□ -0.89
CSGALNACT1-213ENST00000523262 NPSP0C0P6 89 aa9.51□□□□□ -0.89
CSGALNACT1-213ENST00000523262 FABP4P15090 132 aa9.51□□□□□ -0.89
CSGALNACT1-213ENST00000523262 KIAA0087Q14695 138 aa9.51□□□□□ -0.89
CSGALNACT1-213ENST00000523262 KRTAP7-1Q8IUC3 87 aa9.51□□□□□ -0.89
CSGALNACT1-213ENST00000523262 A0A096LNJ9 63 aa9.5□□□□□ -0.89
CSGALNACT1-213ENST00000523262 C2orf66Q6UXQ4 117 aa9.5□□□□□ -0.89
CSGALNACT1-213ENST00000523262 C2orf82Q6UX34 121 aa9.49□□□□□ -0.89
CSGALNACT1-213ENST00000523262 ERASQ7Z444 233 aa9.49□□□□□ -0.89
CSGALNACT1-213ENST00000523262 TMEM141Q96I45 108 aa9.49□□□□□ -0.89
CSGALNACT1-213ENST00000523262 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
CSGALNACT1-213ENST00000523262 LOC105371267A0A1B0GV96 52 aa9.48□□□□□ -0.89
CSGALNACT1-213ENST00000523262 ZNF861PO60384 105 aa9.48□□□□□ -0.89
CSGALNACT1-213ENST00000523262 PRSS2P07478 247 aa9.48□□□□□ -0.89
CSGALNACT1-213ENST00000523262 PMCHL1Q16048 86 aa9.48□□□□□ -0.89
CSGALNACT1-213ENST00000523262 PAPPA-AS1Q5QFB9 102 aa9.48□□□□□ -0.89
CSGALNACT1-213ENST00000523262 C9orf129Q5T035 196 aaKnown RBP9.48□□□□□ -0.89
CSGALNACT1-213ENST00000523262 LINC00242Q5T6M2 205 aa9.48□□□□□ -0.89
CSGALNACT1-213ENST00000523262 TIMM17AQ99595 171 aa9.48□□□□□ -0.89
CSGALNACT1-213ENST00000523262 MAP1LC3CQ9BXW4 147 aa9.48□□□□□ -0.89
CSGALNACT1-213ENST00000523262 AKR1D1P51857 326 aa9.47□□□□□ -0.89
CSGALNACT1-213ENST00000523262 IFI27L1Q96BM0 104 aa9.47□□□□□ -0.89
CSGALNACT1-213ENST00000523262 SCGB3A1Q96QR1 104 aa9.47□□□□□ -0.89
CSGALNACT1-213ENST00000523262 C2orf88Q9BSF0 95 aa9.47□□□□□ -0.89
CSGALNACT1-213ENST00000523262 IGLV4-3A0A075B6K6 122 aa9.46□□□□□ -0.9
CSGALNACT1-213ENST00000523262 TSPAN13O95857 204 aa9.46□□□□□ -0.9
CSGALNACT1-213ENST00000523262 CKS1BP61024 79 aa9.46□□□□□ -0.9
CSGALNACT1-213ENST00000523262 LBHQ53QV2 105 aaPredicted RBP9.46□□□□□ -0.9
CSGALNACT1-213ENST00000523262 TEX43Q6ZNM6 134 aa9.46□□□□□ -0.9
CSGALNACT1-213ENST00000523262 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.9
CSGALNACT1-213ENST00000523262 IGIPA6NJ69 53 aa9.45□□□□□ -0.9
CSGALNACT1-213ENST00000523262 PET117Q6UWS5 81 aa9.45□□□□□ -0.9
CSGALNACT1-213ENST00000523262 TOMM7Q9P0U1 55 aa9.45□□□□□ -0.9
CSGALNACT1-213ENST00000523262 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
CSGALNACT1-213ENST00000523262 Q6ZN92 141 aa9.44□□□□□ -0.9
CSGALNACT1-213ENST00000523262 MUC2Q02817 5179 aa9.44□□□□□ -0.9
CSGALNACT1-213ENST00000523262 SYS1-DBNDD2H3BUS1 97 aa9.43□□□□□ -0.9
CSGALNACT1-213ENST00000523262 C3orf79P0CE67 100 aa9.43□□□□□ -0.9
CSGALNACT1-213ENST00000523262 LINC00469Q8N7U9 141 aa9.43□□□□□ -0.9
CSGALNACT1-213ENST00000523262 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
CSGALNACT1-213ENST00000523262 TRAV12-1A0A0B4J245 112 aa9.42□□□□□ -0.9
CSGALNACT1-213ENST00000523262 C20orf202A1L168 122 aa9.42□□□□□ -0.9
CSGALNACT1-213ENST00000523262 KRTDAPP60985 99 aa9.42□□□□□ -0.9
CSGALNACT1-213ENST00000523262 RPL28P46779 137 aaKnown RBP9.41□□□□□ -0.9
CSGALNACT1-213ENST00000523262 JOSD1Q15040 202 aaPredicted RBP9.41□□□□□ -0.9
CSGALNACT1-213ENST00000523262 VCX2Q9H322 139 aa9.41□□□□□ -0.9
CSGALNACT1-213ENST00000523262 XAGE1AQ9HD64 81 aa9.41□□□□□ -0.9
CSGALNACT1-213ENST00000523262 PMVKQ15126 192 aa9.4□□□□□ -0.9
CSGALNACT1-213ENST00000523262 LINC00173Q6ZV60 143 aa9.4□□□□□ -0.9
CSGALNACT1-213ENST00000523262 Q8IZM0 81 aa9.4□□□□□ -0.9
CSGALNACT1-213ENST00000523262 TYMSOSQ8TAI1 123 aa9.4□□□□□ -0.9
CSGALNACT1-213ENST00000523262 CRYGAP11844 174 aa9.39□□□□□ -0.91
CSGALNACT1-213ENST00000523262 AMELXQ99217 191 aa9.39□□□□□ -0.91
CSGALNACT1-213ENST00000523262 ZC2HC1BQ5TFG8 222 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms