RNA–Protein interactions for RNA: ENST00000521710.1

NPM1-209, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-209ENST00000521710 NIT2Q9NQR4 276 aa0.51□□□□□ -2.33
NPM1-209ENST00000521710 BIN3Q9NQY0 253 aa0.51□□□□□ -2.33
NPM1-209ENST00000521710 ATPIF1Q9UII2 106 aa0.51□□□□□ -2.33
NPM1-209ENST00000521710 TNFSF18Q9UNG2 199 aa0.51□□□□□ -2.33
NPM1-209ENST00000521710 TIMM8BQ9Y5J9 83 aaPredicted RBP0.51□□□□□ -2.33
NPM1-209ENST00000521710 TRAV2A0A0B4J234 112 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 C20orf202A1L168 122 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 CST7O76096 145 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 NDUFA3O95167 84 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 PPYP01298 95 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 GYPBP06028 91 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 S100A5P33763 92 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 SNRPD3P62318 126 aaKnown RBP0.5□□□□□ -2.33
NPM1-209ENST00000521710 MIR22HGQ0VDD5 57 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 FXYD3Q14802 87 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 LINC01556Q5JQF7 62 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 GLIPR1L1Q6UWM5 242 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 FOXI2Q6ZQN5 318 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 VSTM2AQ8TAG5 236 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 TSKUQ8WUA8 353 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 SPTSSAQ969W0 71 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 SDF2Q99470 211 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 TTTY10Q9BZA0 68 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 MAP1LC3BQ9GZQ8 125 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 LINC00474Q9P2X8 69 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 NAT8BQ9UHF3 227 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 MPC1Q9Y5U8 109 aa0.5□□□□□ -2.33
NPM1-209ENST00000521710 TRBV20-1A0A075B6N2 111 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 FXYD6-FXYD2A0A087WZ82 144 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 TRBV7-1A0A0A6YYK4 115 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 TRDV1A0A1B0GX56 115 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 A0A1W2PRE2 83 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 MAP1LC3B2A6NCE7 125 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 APOC4-APOC2K7ER74 178 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 M0R135 149 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 GPR31O00270 319 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 IGHV3-30P01768 117 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 IGHV3-33P01772 117 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 APOC2P02655 101 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 HMGN2P05204 90 aaKnown RBP0.49□□□□□ -2.33
NPM1-209ENST00000521710 IGHV3-30-5P0DP03 117 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 RPL35P42766 123 aaKnown RBP0.49□□□□□ -2.33
NPM1-209ENST00000521710 SPINK9Q5DT21 86 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 TMEM78Q5T7P6 136 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 SAMD13Q5VXD3 122 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 LINC00269Q8N2A0 174 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 TMEM167AQ8TBQ9 72 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 LIMD2Q9BT23 127 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 RHPN1-AS1Q9BWJ2 59 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 IL20Q9NYY1 176 aa0.49□□□□□ -2.33
NPM1-209ENST00000521710 METTL1Q9UBP6 276 aaKnown RBP0.49□□□□□ -2.33
NPM1-209ENST00000521710 TRAV23DV6A0A075B6W5 121 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 JMJD7-PLA2G4BH0Y9G9 81 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 GABARAPH6UMI1 98 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 CYB5AP00167 134 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 DBIP07108 87 aaKnown RBP0.48□□□□□ -2.33
NPM1-209ENST00000521710 FABP1P07148 127 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 CD14P08571 375 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 HTN1P15515 57 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 HIST1H1BP16401 226 aaKnown RBP0.48□□□□□ -2.33
NPM1-209ENST00000521710 ETV6P41212 452 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 Q0VG73 95 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 PSMG4Q5JS54 123 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 GLYATL3Q5SZD4 288 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 HRCT1Q6UXD1 115 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 KRTAP19-3Q7Z4W3 81 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 STX12Q86Y82 276 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 OR10AG1Q8NH19 301 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 LEAP2Q969E1 77 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 RERGLQ9H628 205 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 NOP10Q9NPE3 64 aaKnown RBP0.48□□□□□ -2.33
NPM1-209ENST00000521710 SMPXQ9UHP9 88 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 PRO0255Q9UI72 69 aa0.48□□□□□ -2.33
NPM1-209ENST00000521710 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 APOC1P02654 83 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 PRH1P02810 166 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 FABP2P12104 132 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 HLA-DRB4P13762 266 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 S100A11P31949 105 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 UBE2D3P61077 147 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 VMA21Q3ZAQ7 101 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 SPAG11AQ6PDA7 123 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 OR5A2Q8NGI9 324 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 ZNF431Q8TF32 576 aaPredicted RBP0.47□□□□□ -2.33
NPM1-209ENST00000521710 TMEM263Q8WUH6 116 aaKnown RBP0.47□□□□□ -2.33
NPM1-209ENST00000521710 TMEM203Q969S6 136 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 CALML5Q9NZT1 146 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 HLA-DRB4X5D2U9 266 aa0.47□□□□□ -2.33
NPM1-209ENST00000521710 LYRM1O43325 122 aa0.46□□□□□ -2.34
NPM1-209ENST00000521710 ZNF137PP52743 207 aa0.46□□□□□ -2.34
NPM1-209ENST00000521710 FXYD4P59646 89 aa0.46□□□□□ -2.34
NPM1-209ENST00000521710 VBP1P61758 197 aa0.46□□□□□ -2.34
NPM1-209ENST00000521710 PRCDQ00LT1 54 aa0.46□□□□□ -2.34
NPM1-209ENST00000521710 COX6A2Q02221 97 aa0.46□□□□□ -2.34
NPM1-209ENST00000521710 Q56UQ5 140 aa0.46□□□□□ -2.34
NPM1-209ENST00000521710 Q5VV11 94 aa0.46□□□□□ -2.34
NPM1-209ENST00000521710 SLC25A26Q70HW3 274 aa0.46□□□□□ -2.34
NPM1-209ENST00000521710 TTC9CQ8N5M4 171 aa0.46□□□□□ -2.34
NPM1-209ENST00000521710 TRGV1A0A0A0MS02 117 aa0.45□□□□□ -2.34
NPM1-209ENST00000521710 A0A1B0GWA3 101 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms