RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 PKIGQ9Y2B9 76 aa6.65□□□□□ -1.34
TRIM35-204ENST00000521283 DPM2O94777 84 aa6.64□□□□□ -1.35
TRIM35-204ENST00000521283 TSHBP01222 138 aa6.64□□□□□ -1.35
TRIM35-204ENST00000521283 HSD52Q0P140 79 aa6.64□□□□□ -1.35
TRIM35-204ENST00000521283 Q5VSD8 79 aa6.64□□□□□ -1.35
TRIM35-204ENST00000521283 CHAC1Q9BUX1 264 aa6.64□□□□□ -1.35
TRIM35-204ENST00000521283 IGLV10-54A0A075B6I4 117 aa6.63□□□□□ -1.35
TRIM35-204ENST00000521283 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.63□□□□□ -1.35
TRIM35-204ENST00000521283 hDV102S1A0JD36 115 aa6.63□□□□□ -1.35
TRIM35-204ENST00000521283 IGKV2-29A2NJV5 120 aaPredicted RBP6.63□□□□□ -1.35
TRIM35-204ENST00000521283 IGKCP01834 107 aa6.63□□□□□ -1.35
TRIM35-204ENST00000521283 PRSS1P07477 247 aa6.63□□□□□ -1.35
TRIM35-204ENST00000521283 SS18Q15532 418 aa6.63□□□□□ -1.35
TRIM35-204ENST00000521283 NRACQ8N912 160 aa6.63□□□□□ -1.35
TRIM35-204ENST00000521283 TMEM141Q96I45 108 aa6.63□□□□□ -1.35
TRIM35-204ENST00000521283 A0A096LNJ9 63 aa6.62□□□□□ -1.35
TRIM35-204ENST00000521283 LOC389332A0A1B0GUA5 103 aa6.62□□□□□ -1.35
TRIM35-204ENST00000521283 CHCHD10Q8WYQ3 142 aaPredicted RBP6.62□□□□□ -1.35
TRIM35-204ENST00000521283 TOMM6Q96B49 74 aa6.62□□□□□ -1.35
TRIM35-204ENST00000521283 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
TRIM35-204ENST00000521283 CDC42SE2Q9NRR3 84 aa6.62□□□□□ -1.35
TRIM35-204ENST00000521283 FAM30AQ9NZY2 134 aa6.62□□□□□ -1.35
TRIM35-204ENST00000521283 IGHV3-64A0A075B6Q5 118 aa6.61□□□□□ -1.35
TRIM35-204ENST00000521283 GAGE12HA6NDE8 117 aa6.61□□□□□ -1.35
TRIM35-204ENST00000521283 F8VRH5 84 aa6.61□□□□□ -1.35
TRIM35-204ENST00000521283 SLPIP03973 132 aa6.61□□□□□ -1.35
TRIM35-204ENST00000521283 INAFM2P0DMQ5 153 aa6.61□□□□□ -1.35
TRIM35-204ENST00000521283 TIMM17AQ99595 171 aa6.61□□□□□ -1.35
TRIM35-204ENST00000521283 CYSLTR1Q9Y271 337 aa6.61□□□□□ -1.35
TRIM35-204ENST00000521283 LINC00959A0A1B0GUT2 108 aa6.6□□□□□ -1.35
TRIM35-204ENST00000521283 GAS8-AS1O95177 125 aa6.6□□□□□ -1.35
TRIM35-204ENST00000521283 SMR3BP02814 79 aaPredicted RBP6.6□□□□□ -1.35
TRIM35-204ENST00000521283 HERVK_113P61574 105 aa6.6□□□□□ -1.35
TRIM35-204ENST00000521283 ODF1Q14990 250 aa6.6□□□□□ -1.35
TRIM35-204ENST00000521283 BVES-AS1Q5T3Y7 98 aa6.6□□□□□ -1.35
TRIM35-204ENST00000521283 CD164L2Q6UWJ8 174 aa6.6□□□□□ -1.35
TRIM35-204ENST00000521283 GTF2H5Q6ZYL4 71 aa6.6□□□□□ -1.35
TRIM35-204ENST00000521283 ATOH7Q8N100 152 aa6.6□□□□□ -1.35
TRIM35-204ENST00000521283 DEFB104AQ8WTQ1 72 aa6.6□□□□□ -1.35
TRIM35-204ENST00000521283 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
TRIM35-204ENST00000521283 FAT1Q14517 4588 aa6.59□□□□□ -1.35
TRIM35-204ENST00000521283 GVQW2A0A096LPI5 108 aaPredicted RBP6.59□□□□□ -1.35
TRIM35-204ENST00000521283 IGHV1-58A0A0C4DH39 117 aa6.59□□□□□ -1.35
TRIM35-204ENST00000521283 IGKV3OR2-268A0A0C4DH90 116 aa6.59□□□□□ -1.35
TRIM35-204ENST00000521283 SMKR1H3BMG3 65 aa6.59□□□□□ -1.35
TRIM35-204ENST00000521283 UBE2V1Q13404 147 aa6.59□□□□□ -1.35
TRIM35-204ENST00000521283 BATFQ16520 125 aa6.59□□□□□ -1.35
TRIM35-204ENST00000521283 SCXQ7RTU7 201 aa6.59□□□□□ -1.35
TRIM35-204ENST00000521283 UBE2D4Q9Y2X8 147 aa6.59□□□□□ -1.35
TRIM35-204ENST00000521283 H3BRM9 83 aa6.58□□□□□ -1.36
TRIM35-204ENST00000521283 FOXI1Q12951 378 aa6.58□□□□□ -1.36
TRIM35-204ENST00000521283 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
TRIM35-204ENST00000521283 CIRBP-AS1Q8TBR5 109 aa6.58□□□□□ -1.36
TRIM35-204ENST00000521283 SCGB3A1Q96QR1 104 aa6.58□□□□□ -1.36
TRIM35-204ENST00000521283 SPANXA1Q9NS26 97 aa6.58□□□□□ -1.36
TRIM35-204ENST00000521283 SRRM2Q9UQ35 2752 aaKnown RBP6.57□□□□□ -1.36
TRIM35-204ENST00000521283 APOMO95445 188 aa6.57□□□□□ -1.36
TRIM35-204ENST00000521283 XCL1P47992 114 aa6.57□□□□□ -1.36
TRIM35-204ENST00000521283 HINT1P49773 126 aaPredicted RBP6.57□□□□□ -1.36
TRIM35-204ENST00000521283 PTTG1IPP53801 180 aa6.57□□□□□ -1.36
TRIM35-204ENST00000521283 LINC01620Q4KN68 170 aa6.57□□□□□ -1.36
TRIM35-204ENST00000521283 STPG4Q8N801 248 aa6.57□□□□□ -1.36
TRIM35-204ENST00000521283 C15orf56Q8N910 161 aa6.57□□□□□ -1.36
TRIM35-204ENST00000521283 LINC00474Q9P2X8 69 aa6.57□□□□□ -1.36
TRIM35-204ENST00000521283 H0Y8G0 127 aa6.56□□□□□ -1.36
TRIM35-204ENST00000521283 ZNF561-AS1K7EIQ3 104 aa6.56□□□□□ -1.36
TRIM35-204ENST00000521283 MALP21145 153 aa6.56□□□□□ -1.36
TRIM35-204ENST00000521283 MRPS36P82909 103 aaKnown RBP6.56□□□□□ -1.36
TRIM35-204ENST00000521283 CIRBPQ14011 172 aaKnown RBP6.56□□□□□ -1.36
TRIM35-204ENST00000521283 LYRM7Q5U5X0 104 aa6.56□□□□□ -1.36
TRIM35-204ENST00000521283 LINC00173Q6ZV60 143 aa6.56□□□□□ -1.36
TRIM35-204ENST00000521283 PYGO1Q9Y3Y4 419 aa6.56□□□□□ -1.36
TRIM35-204ENST00000521283 F8WDY8 70 aa6.55□□□□□ -1.36
TRIM35-204ENST00000521283 COX7A2LO14548 114 aa6.55□□□□□ -1.36
TRIM35-204ENST00000521283 PMVKQ15126 192 aa6.55□□□□□ -1.36
TRIM35-204ENST00000521283 C2orf66Q6UXQ4 117 aa6.55□□□□□ -1.36
TRIM35-204ENST00000521283 DPH3Q96FX2 82 aa6.55□□□□□ -1.36
TRIM35-204ENST00000521283 CHTOPQ9Y3Y2 248 aaKnown RBP6.55□□□□□ -1.36
TRIM35-204ENST00000521283 E9PLD3 99 aa6.54□□□□□ -1.36
TRIM35-204ENST00000521283 HAMPP81172 84 aa6.54□□□□□ -1.36
TRIM35-204ENST00000521283 VAMP3Q15836 100 aa6.54□□□□□ -1.36
TRIM35-204ENST00000521283 MAJINQ3KP22 176 aa6.54□□□□□ -1.36
TRIM35-204ENST00000521283 ZC2HC1BQ5TFG8 222 aa6.54□□□□□ -1.36
TRIM35-204ENST00000521283 C2orf91Q6ZV80 131 aa6.54□□□□□ -1.36
TRIM35-204ENST00000521283 SMIM13P0DJ93 91 aa6.53□□□□□ -1.36
TRIM35-204ENST00000521283 NMUP48645 174 aa6.53□□□□□ -1.36
TRIM35-204ENST00000521283 RNF151Q2KHN1 245 aa6.53□□□□□ -1.36
TRIM35-204ENST00000521283 CBY1Q9Y3M2 126 aa6.53□□□□□ -1.36
TRIM35-204ENST00000521283 TRAV13-1A0A0B4J241 112 aa6.52□□□□□ -1.37
TRIM35-204ENST00000521283 C11orf86A6NJI1 115 aa6.52□□□□□ -1.37
TRIM35-204ENST00000521283 HIGD2BQ4VC39 106 aa6.52□□□□□ -1.37
TRIM35-204ENST00000521283 SPACA4Q8TDM5 124 aa6.52□□□□□ -1.37
TRIM35-204ENST00000521283 C2orf48Q96LS8 159 aa6.52□□□□□ -1.37
TRIM35-204ENST00000521283 CARD19Q96LW7 228 aa6.52□□□□□ -1.37
TRIM35-204ENST00000521283 MRPL35Q9NZE8 188 aaKnown RBP6.52□□□□□ -1.37
TRIM35-204ENST00000521283 DMBT1Q9UGM3 2413 aaPredicted RBP6.51□□□□□ -1.37
TRIM35-204ENST00000521283 IGLV4-69A0A075B6H9 119 aa6.51□□□□□ -1.37
TRIM35-204ENST00000521283 MYMXA0A1B0GTQ4 84 aa6.51□□□□□ -1.37
TRIM35-204ENST00000521283 IGIPA6NJ69 53 aa6.51□□□□□ -1.37
TRIM35-204ENST00000521283 TAX1BP3O14907 124 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms