RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 TEX15Q9BXT5 2789 aa9.05□□□□□ -0.96
TRAPPC9-208ENST00000520857 C20orf197Q8N268 126 aa9.05□□□□□ -0.96
TRAPPC9-208ENST00000520857 C22orf24Q9Y442 160 aa9.05□□□□□ -0.96
TRAPPC9-208ENST00000520857 CCL24O00175 119 aa9.04□□□□□ -0.96
TRAPPC9-208ENST00000520857 C5orf47Q569G3 176 aa9.04□□□□□ -0.96
TRAPPC9-208ENST00000520857 FBN2P35556 2912 aa9.04□□□□□ -0.96
TRAPPC9-208ENST00000520857 TRBV6-8A0A0A6YYG3 113 aa9.04□□□□□ -0.96
TRAPPC9-208ENST00000520857 CYSTM1Q9H1C7 97 aa9.03□□□□□ -0.96
TRAPPC9-208ENST00000520857 FAM19A1Q7Z5A9 133 aa9.03□□□□□ -0.96
TRAPPC9-208ENST00000520857 UTP20O75691 2785 aaKnown RBP9.02□□□□□ -0.96
TRAPPC9-208ENST00000520857 TMEM258P61165 79 aa9.02□□□□□ -0.96
TRAPPC9-208ENST00000520857 C16orf74Q96GX8 76 aa9.02□□□□□ -0.96
TRAPPC9-208ENST00000520857 C2orf48Q96LS8 159 aa9.02□□□□□ -0.97
TRAPPC9-208ENST00000520857 TRBV6-4A0A1B0GX49 114 aa9.02□□□□□ -0.97
TRAPPC9-208ENST00000520857 GYPEP15421 78 aa9.02□□□□□ -0.97
TRAPPC9-208ENST00000520857 NBEAL2Q6ZNJ1 2754 aa9.02□□□□□ -0.97
TRAPPC9-208ENST00000520857 MXRA5Q9NR99 2828 aa9.01□□□□□ -0.97
TRAPPC9-208ENST00000520857 IGHV3OR16-9A0A0B4J2B5 98 aa9.01□□□□□ -0.97
TRAPPC9-208ENST00000520857 A8MTW9 85 aa9.01□□□□□ -0.97
TRAPPC9-208ENST00000520857 JMJD7-PLA2G4BH0Y9G9 81 aa9.01□□□□□ -0.97
TRAPPC9-208ENST00000520857 LINC01561Q8N1V8 128 aa9.01□□□□□ -0.97
TRAPPC9-208ENST00000520857 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
TRAPPC9-208ENST00000520857 ESM1Q9NQ30 184 aa9.01□□□□□ -0.97
TRAPPC9-208ENST00000520857 GCN1Q92616 2671 aaKnown RBP9□□□□□ -0.97
TRAPPC9-208ENST00000520857 CFAP46Q8IYW2 2715 aa9□□□□□ -0.97
TRAPPC9-208ENST00000520857 NF1P21359 2839 aa9□□□□□ -0.97
TRAPPC9-208ENST00000520857 A0A087WZ39 114 aa9□□□□□ -0.97
TRAPPC9-208ENST00000520857 CCKP06307 115 aa9□□□□□ -0.97
TRAPPC9-208ENST00000520857 C6orf99Q4VX62 202 aa9□□□□□ -0.97
TRAPPC9-208ENST00000520857 TMEM256-PLSCR3K7ERE1 68 aa8.99□□□□□ -0.97
TRAPPC9-208ENST00000520857 UPK3BQ9BT76 320 aa8.99□□□□□ -0.97
TRAPPC9-208ENST00000520857 DPH3Q96FX2 82 aa8.99□□□□□ -0.97
TRAPPC9-208ENST00000520857 ANGP03950 147 aaKnown RBP8.98□□□□□ -0.97
TRAPPC9-208ENST00000520857 IGHV4-31P0DP07 118 aa8.98□□□□□ -0.97
TRAPPC9-208ENST00000520857 C9orf116Q5BN46 136 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC9-208ENST00000520857 HRCT1Q6UXD1 115 aa8.98□□□□□ -0.97
TRAPPC9-208ENST00000520857 VPS13CQ709C8 3753 aa8.97□□□□□ -0.97
TRAPPC9-208ENST00000520857 LINC00269Q8N2A0 174 aa8.97□□□□□ -0.97
TRAPPC9-208ENST00000520857 TRAV25A0A0B4J276 109 aa8.97□□□□□ -0.97
TRAPPC9-208ENST00000520857 FAM19A3Q7Z5A8 133 aa8.97□□□□□ -0.97
TRAPPC9-208ENST00000520857 HTN3P15516 51 aa8.96□□□□□ -0.97
TRAPPC9-208ENST00000520857 Q8N814 137 aa8.96□□□□□ -0.97
TRAPPC9-208ENST00000520857 CSMD2Q7Z408 3487 aa8.96□□□□□ -0.98
TRAPPC9-208ENST00000520857 RBM3P98179 157 aaKnown RBP8.95□□□□□ -0.98
TRAPPC9-208ENST00000520857 PRB1P04280 392 aa8.95□□□□□ -0.98
TRAPPC9-208ENST00000520857 C4orf26Q17RF5 130 aa8.94□□□□□ -0.98
TRAPPC9-208ENST00000520857 DEFB4AO15263 64 aa8.94□□□□□ -0.98
TRAPPC9-208ENST00000520857 FHL2Q14192 279 aa8.94□□□□□ -0.98
TRAPPC9-208ENST00000520857 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
TRAPPC9-208ENST00000520857 WFDC11Q8NEX6 87 aa8.93□□□□□ -0.98
TRAPPC9-208ENST00000520857 SNURFQ9Y675 71 aa8.93□□□□□ -0.98
TRAPPC9-208ENST00000520857 FLNAP21333 2647 aaKnown RBP8.93□□□□□ -0.98
TRAPPC9-208ENST00000520857 RPS28P62857 69 aaKnown RBP8.92□□□□□ -0.98
TRAPPC9-208ENST00000520857 CMC4P56277 68 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC9-208ENST00000520857 FAM236DA0A1B0GTK5 79 aa8.91□□□□□ -0.98
TRAPPC9-208ENST00000520857 FAM236CP0DP71 79 aa8.91□□□□□ -0.98
TRAPPC9-208ENST00000520857 ATP5EP2Q5VTU8 51 aa8.91□□□□□ -0.98
TRAPPC9-208ENST00000520857 KRTAP10-9P60411 292 aa8.91□□□□□ -0.98
TRAPPC9-208ENST00000520857 Q8IZM0 81 aa8.91□□□□□ -0.98
TRAPPC9-208ENST00000520857 IL17DQ8TAD2 202 aa8.91□□□□□ -0.98
TRAPPC9-208ENST00000520857 CHCHD10Q8WYQ3 142 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC9-208ENST00000520857 BBC3Q96PG8 261 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC9-208ENST00000520857 DNAJC9-AS1A6NH13 148 aa8.9□□□□□ -0.98
TRAPPC9-208ENST00000520857 SETXQ7Z333 2677 aaKnown RBP8.9□□□□□ -0.98
TRAPPC9-208ENST00000520857 Q6ZQY7 126 aa8.9□□□□□ -0.99
TRAPPC9-208ENST00000520857 NIPBLQ6KC79 2804 aaeCLIP8.9□□□□□ -0.99
TRAPPC9-208ENST00000520857 NDUFC2O95298 119 aa8.89□□□□□ -0.99
TRAPPC9-208ENST00000520857 IGSF10Q6WRI0 2623 aa8.89□□□□□ -0.99
TRAPPC9-208ENST00000520857 OBSCN-AS1Q96MR7 158 aa8.88□□□□□ -0.99
TRAPPC9-208ENST00000520857 GIG44P09565 113 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC9-208ENST00000520857 SPAG11BQ08648 103 aa8.87□□□□□ -0.99
TRAPPC9-208ENST00000520857 Q8N3U1 123 aa8.87□□□□□ -0.99
TRAPPC9-208ENST00000520857 PLAC8L1A1L4L8 177 aa8.87□□□□□ -0.99
TRAPPC9-208ENST00000520857 REG3AQ06141 175 aa8.87□□□□□ -0.99
TRAPPC9-208ENST00000520857 XAGE1AQ9HD64 81 aa8.87□□□□□ -0.99
TRAPPC9-208ENST00000520857 PRO0255Q9UI72 69 aa8.87□□□□□ -0.99
TRAPPC9-208ENST00000520857 UNQ6190/PRO20217Q6UXQ8 127 aa8.86□□□□□ -0.99
TRAPPC9-208ENST00000520857 DEFB113Q30KQ7 82 aa8.86□□□□□ -0.99
TRAPPC9-208ENST00000520857 ZNF843Q8N446 348 aa8.86□□□□□ -0.99
TRAPPC9-208ENST00000520857 C6orf223Q8N319 242 aa8.85□□□□□ -0.99
TRAPPC9-208ENST00000520857 ITPR3Q14573 2671 aa8.85□□□□□ -0.99
TRAPPC9-208ENST00000520857 LY6G6DO95868 133 aa8.85□□□□□ -0.99
TRAPPC9-208ENST00000520857 OXTP01178 125 aa8.85□□□□□ -0.99
TRAPPC9-208ENST00000520857 CD164L2Q6UWJ8 174 aa8.85□□□□□ -0.99
TRAPPC9-208ENST00000520857 LINC01006Q8NI28 216 aa8.85□□□□□ -0.99
TRAPPC9-208ENST00000520857 A0A096LNT2 108 aa8.84□□□□□ -0.99
TRAPPC9-208ENST00000520857 CR1P17927 2039 aa8.84□□□□□ -0.99
TRAPPC9-208ENST00000520857 ZNF561-AS1K7EIQ3 104 aa8.84□□□□□ -0.99
TRAPPC9-208ENST00000520857 RMI2Q96E14 147 aa8.84□□□□□ -0.99
TRAPPC9-208ENST00000520857 FSHBP01225 129 aa8.83□□□□□ -1
TRAPPC9-208ENST00000520857 LINC01547P58512 204 aaPredicted RBP8.83□□□□□ -1
TRAPPC9-208ENST00000520857 NANOS2P60321 138 aaKnown RBP8.83□□□□□ -1
TRAPPC9-208ENST00000520857 LINC00575Q6W349 94 aa8.83□□□□□ -1
TRAPPC9-208ENST00000520857 APCP25054 2843 aa8.83□□□□□ -1
TRAPPC9-208ENST00000520857 KLK12Q9UKR0 248 aa8.83□□□□□ -1
TRAPPC9-208ENST00000520857 Q6ZVQ6 151 aa8.83□□□□□ -1
TRAPPC9-208ENST00000520857 M0R2N4 97 aa8.82□□□□□ -1
TRAPPC9-208ENST00000520857 DAD1P61803 113 aa8.82□□□□□ -1
TRAPPC9-208ENST00000520857 F8WEM9 126 aa8.82□□□□□ -1
TRAPPC9-208ENST00000520857 TRAV7A0A075B6U4 112 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms