RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 D6R8Y8 96 aa6□□□□□ -1.45
CTNNA1-221ENST00000520339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6□□□□□ -1.45
CTNNA1-221ENST00000520339 SERF1AO75920 110 aa6□□□□□ -1.45
CTNNA1-221ENST00000520339 MRPL51Q4U2R6 128 aaKnown RBP6□□□□□ -1.45
CTNNA1-221ENST00000520339 TMEM97Q5BJF2 176 aa6□□□□□ -1.45
CTNNA1-221ENST00000520339 BVES-AS1Q5T3Y7 98 aa6□□□□□ -1.45
CTNNA1-221ENST00000520339 KRTAP26-1Q6PEX3 210 aa6□□□□□ -1.45
CTNNA1-221ENST00000520339 CHCHD5Q9BSY4 110 aa6□□□□□ -1.45
CTNNA1-221ENST00000520339 KRTAP4-2Q9BYR5 136 aa6□□□□□ -1.45
CTNNA1-221ENST00000520339 DPH3P1Q9H4G8 78 aa6□□□□□ -1.45
CTNNA1-221ENST00000520339 PRR34Q9NV39 138 aa6□□□□□ -1.45
CTNNA1-221ENST00000520339 FAT3Q8TDW7 4589 aa6□□□□□ -1.45
CTNNA1-221ENST00000520339 M0QY20 66 aa5.99□□□□□ -1.45
CTNNA1-221ENST00000520339 CRPP02741 224 aa5.99□□□□□ -1.45
CTNNA1-221ENST00000520339 ANGP03950 147 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-221ENST00000520339 CKS2P33552 79 aa5.99□□□□□ -1.45
CTNNA1-221ENST00000520339 MIAQ16674 131 aa5.99□□□□□ -1.45
CTNNA1-221ENST00000520339 RNASEKQ6P5S7 137 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-221ENST00000520339 RNF185Q96GF1 192 aa5.99□□□□□ -1.45
CTNNA1-221ENST00000520339 PRELID3AQ96N28 172 aa5.99□□□□□ -1.45
CTNNA1-221ENST00000520339 SS18L2Q9UHA2 77 aa5.99□□□□□ -1.45
CTNNA1-221ENST00000520339 NCR2O95944 276 aa5.98□□□□□ -1.45
CTNNA1-221ENST00000520339 PRSS1P07477 247 aa5.98□□□□□ -1.45
CTNNA1-221ENST00000520339 MGPP08493 103 aa5.98□□□□□ -1.45
CTNNA1-221ENST00000520339 VPREB1P12018 145 aa5.98□□□□□ -1.45
CTNNA1-221ENST00000520339 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
CTNNA1-221ENST00000520339 TRBV25-1A0A075B6N4 114 aa5.97□□□□□ -1.45
CTNNA1-221ENST00000520339 F8W1H4 67 aa5.97□□□□□ -1.45
CTNNA1-221ENST00000520339 SMKR1H3BMG3 65 aa5.97□□□□□ -1.45
CTNNA1-221ENST00000520339 LINC00269Q8N2A0 174 aa5.97□□□□□ -1.45
CTNNA1-221ENST00000520339 CHCHD1Q96BP2 118 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-221ENST00000520339 SPANXDQ9BXN6 97 aa5.97□□□□□ -1.45
CTNNA1-221ENST00000520339 MAP1LC3AQ9H492 121 aa5.97□□□□□ -1.45
CTNNA1-221ENST00000520339 HMCN2Q8NDA2 5059 aa5.97□□□□□ -1.45
CTNNA1-221ENST00000520339 IGHV1-24A0A0C4DH33 117 aa5.96□□□□□ -1.46
CTNNA1-221ENST00000520339 HSBP1O75506 76 aa5.96□□□□□ -1.46
CTNNA1-221ENST00000520339 NPYP01303 97 aa5.96□□□□□ -1.46
CTNNA1-221ENST00000520339 PMCHP20382 165 aa5.96□□□□□ -1.46
CTNNA1-221ENST00000520339 CLPSL2Q6UWE3 100 aa5.96□□□□□ -1.46
CTNNA1-221ENST00000520339 ERASQ7Z444 233 aa5.96□□□□□ -1.46
CTNNA1-221ENST00000520339 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.46
CTNNA1-221ENST00000520339 C9orf163Q8N9P6 203 aa5.96□□□□□ -1.46
CTNNA1-221ENST00000520339 TRAV26-2A0A0B4J265 109 aa5.95□□□□□ -1.46
CTNNA1-221ENST00000520339 H7C1H1 209 aa5.95□□□□□ -1.46
CTNNA1-221ENST00000520339 NUPR1O60356 82 aa5.95□□□□□ -1.46
CTNNA1-221ENST00000520339 PPP1R17O96001 155 aa5.95□□□□□ -1.46
CTNNA1-221ENST00000520339 OXTP01178 125 aa5.95□□□□□ -1.46
CTNNA1-221ENST00000520339 SLC25A34Q6PIV7 304 aa5.95□□□□□ -1.46
CTNNA1-221ENST00000520339 SDIM1Q6ZPB5 146 aa5.95□□□□□ -1.46
CTNNA1-221ENST00000520339 C20orf203Q8NBC4 194 aa5.95□□□□□ -1.46
CTNNA1-221ENST00000520339 IGLV4-60A0A075B6I1 120 aa5.94□□□□□ -1.46
CTNNA1-221ENST00000520339 LOC389332A0A1B0GUA5 103 aa5.94□□□□□ -1.46
CTNNA1-221ENST00000520339 A0A1B0GUV1 79 aa5.94□□□□□ -1.46
CTNNA1-221ENST00000520339 PANO1I0J062 215 aa5.94□□□□□ -1.46
CTNNA1-221ENST00000520339 REG3AQ06141 175 aa5.94□□□□□ -1.46
CTNNA1-221ENST00000520339 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
CTNNA1-221ENST00000520339 TMEM243Q9BU79 118 aa5.94□□□□□ -1.46
CTNNA1-221ENST00000520339 NXT2Q9NPJ8 142 aaKnown RBP5.94□□□□□ -1.46
CTNNA1-221ENST00000520339 CSDC2Q9Y534 153 aaKnown RBP5.94□□□□□ -1.46
CTNNA1-221ENST00000520339 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
CTNNA1-221ENST00000520339 TRAV8-4A0A0B4J246 113 aa5.93□□□□□ -1.46
CTNNA1-221ENST00000520339 GAS8-AS1O95177 125 aa5.93□□□□□ -1.46
CTNNA1-221ENST00000520339 IFI27P40305 119 aaPredicted RBP5.93□□□□□ -1.46
CTNNA1-221ENST00000520339 KRTDAPP60985 99 aa5.93□□□□□ -1.46
CTNNA1-221ENST00000520339 RPL37AP61513 92 aaKnown RBP5.93□□□□□ -1.46
CTNNA1-221ENST00000520339 IGLV10-54A0A075B6I4 117 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 PRSS2P07478 247 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 C3orf79P0CE67 100 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 FABP2P12104 132 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 CNBPP62633 177 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 Q6Q795 121 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 Q6ZVH6 145 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 FAM19A2Q8N3H0 131 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 Q8N8P6 123 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 C20orf78Q9BR46 151 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 SMIM2Q9BVW6 85 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
CTNNA1-221ENST00000520339 A0A1W2PPM0 123 aa5.91□□□□□ -1.46
CTNNA1-221ENST00000520339 LINC01546A6NGU7 62 aa5.91□□□□□ -1.46
CTNNA1-221ENST00000520339 M0QXV9 152 aa5.91□□□□□ -1.46
CTNNA1-221ENST00000520339 CIRBPQ14011 172 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-221ENST00000520339 RPL39LQ96EH5 51 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-221ENST00000520339 A0A1B0GX51 115 aa5.9□□□□□ -1.46
CTNNA1-221ENST00000520339 K7EMI3 77 aa5.9□□□□□ -1.46
CTNNA1-221ENST00000520339 LEPROTL1O95214 131 aa5.9□□□□□ -1.46
CTNNA1-221ENST00000520339 HBDP02042 147 aa5.9□□□□□ -1.46
CTNNA1-221ENST00000520339 RPS28P62857 69 aaKnown RBP5.9□□□□□ -1.46
CTNNA1-221ENST00000520339 OR13C6PQ8NH95 151 aa5.9□□□□□ -1.46
CTNNA1-221ENST00000520339 SPANXB1Q9NS25 103 aaPredicted RBP5.9□□□□□ -1.46
CTNNA1-221ENST00000520339 SPCS1Q9Y6A9 102 aa5.9□□□□□ -1.46
CTNNA1-221ENST00000520339 TRBV6-5A0A0K0K1A5 114 aa5.89□□□□□ -1.47
CTNNA1-221ENST00000520339 SPINK8P0C7L1 97 aa5.89□□□□□ -1.47
CTNNA1-221ENST00000520339 IGHV3-64A0A075B6Q5 118 aa5.88□□□□□ -1.47
CTNNA1-221ENST00000520339 UBE2L6O14933 153 aa5.88□□□□□ -1.47
CTNNA1-221ENST00000520339 GAGE2BQ13066 116 aa5.88□□□□□ -1.47
CTNNA1-221ENST00000520339 GAGE2EQ4V326 116 aa5.88□□□□□ -1.47
CTNNA1-221ENST00000520339 ORMDL2Q53FV1 153 aa5.88□□□□□ -1.47
CTNNA1-221ENST00000520339 GAGE2AQ6NT46 116 aa5.88□□□□□ -1.47
CTNNA1-221ENST00000520339 GAGE2DQ9UEU5 116 aa5.88□□□□□ -1.47
CTNNA1-221ENST00000520339 IGLV5-37A0A075B6J1 123 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms