RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ZC2HC1AQ96GY0 325 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 PGLYRP4Q96LB8 373 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 IMUPQ9GZP8 106 aa3.16□□□□□ -1.9
SDCBP-207ENST00000520168 IGHV1OR15-1A0A075B7D0 117 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 IGKV2-40A0A087WW87 121 aaPredicted RBP3.15□□□□□ -1.91
SDCBP-207ENST00000520168 UQCRQO14949 82 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 LECT2O14960 151 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 NUPR1O60356 82 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 SH2D1AO60880 128 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 IGKV2D-40P01614 121 aaPredicted RBP3.15□□□□□ -1.91
SDCBP-207ENST00000520168 IGHV3-30P01768 117 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 IGHV3-33P01772 117 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 IGHV3-30-3P0DP02 117 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 IGHV3-30-5P0DP03 117 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 PSMB2P49721 201 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 ZNF138P52744 262 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 PMCHL1Q16048 86 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 KIAA1644Q3SXP7 199 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 Q6ZUT4 128 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 Q6ZVH6 145 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 CHCHD1Q96BP2 118 aaKnown RBP3.15□□□□□ -1.91
SDCBP-207ENST00000520168 AGPAT4-IT1Q9H0P7 198 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 TP53TG3Q9ULZ0 132 aa3.15□□□□□ -1.91
SDCBP-207ENST00000520168 A0A0J9YXV3 536 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 CCDC179H3BU77 68 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 J3QQQ9 107 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 SNCGO76070 127 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 FABP2P12104 132 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 FOXI1Q12951 378 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 RHOHQ15669 191 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 PIK3CD-AS1Q5SR53 167 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 LYZL1Q6UWQ5 148 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 C18orf32Q8TCD1 76 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 KCNS1Q96KK3 526 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 FAM19A4Q96LR4 140 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 PMCHL2Q9BQD1 86 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 ST20Q9HBF5 79 aa3.14□□□□□ -1.91
SDCBP-207ENST00000520168 IGKV2D-24A0A075B6R9 120 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 LOC107984640A0A0U1RRK4 108 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 PRAC2D3DTV9 90 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 H3BRM9 83 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 TAX1BP3O14907 124 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 ARMS2P0C7Q2 107 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 RNASE4P34096 147 aaKnown RBP3.13□□□□□ -1.91
SDCBP-207ENST00000520168 CTRLP40313 264 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 CACNG7P62955 275 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 HERVK_113P63121 156 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 ERCC8Q13216 396 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 C9orf153Q5TBE3 101 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 FAM104BQ5XKR9 115 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 REG3GQ6UW15 175 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 ATOH7Q8N100 152 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 RNF185Q96GF1 192 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 CHCHD7Q9BUK0 85 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 CNFNQ9BYD5 112 aa3.13□□□□□ -1.91
SDCBP-207ENST00000520168 TRAV21A0A0B4J279 112 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 TRBV6-4A0A1B0GX49 114 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 NDUFC2-KCTD14E9PQ53 114 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 TRACP01848 142 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 IGLC3P0DOY3 106 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 HINT1P49773 126 aaPredicted RBP3.12□□□□□ -1.91
SDCBP-207ENST00000520168 ZNF80P51504 273 aaPredicted RBP3.12□□□□□ -1.91
SDCBP-207ENST00000520168 KRTDAPP60985 99 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 TWIST1Q15672 202 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 LINC01545Q5VT33 79 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 Q6ZVQ6 151 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 Q75L30 129 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 DAZ4Q86SG3 579 aaKnown RBP3.12□□□□□ -1.91
SDCBP-207ENST00000520168 PRR15Q8IV56 129 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 ORMDL3Q8N138 153 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 C3orf22Q8N5N4 141 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 C9orf163Q8N9P6 203 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 PRSS3P2Q8NHM4 247 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 Q8TAT8 98 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 C7orf33Q8WU49 177 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 LINC00526Q96FQ7 95 aa3.12□□□□□ -1.91
SDCBP-207ENST00000520168 DAZ3Q9NR90 486 aaKnown RBP3.12□□□□□ -1.91
SDCBP-207ENST00000520168 TMSB15BA0A087X1C1 80 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 TRAV13-1A0A0B4J241 112 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 IGKV3D-20A0A0C4DH25 116 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 LOC100131303A0A0U1RQF7 123 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 A8MWV9 139 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 M0R2P5 195 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 UBE2L6O14933 153 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 C3orf79P0CE67 100 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 CKS2P33552 79 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 CXCL5P42830 114 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 KRTAP10-8P60410 259 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 SEC61BP60468 96 aaKnown RBP3.11□□□□□ -1.91
SDCBP-207ENST00000520168 CIRBPQ14011 172 aaKnown RBP3.11□□□□□ -1.91
SDCBP-207ENST00000520168 SPATA45Q537H7 98 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 Q5XG85 94 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 SLC25A34Q6PIV7 304 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 ZFAND2AQ8N6M9 145 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 SLC25A29Q8N8R3 303 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 OR10AG1Q8NH19 301 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 PRELID3AQ96N28 172 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 NAA38Q9BRA0 125 aaKnown RBP3.11□□□□□ -1.91
SDCBP-207ENST00000520168 PYGO1Q9Y3Y4 419 aa3.11□□□□□ -1.91
SDCBP-207ENST00000520168 A0A087WZ39 114 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms