RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 SMIM1B2RUZ4 78 aa7.57□□□□□ -1.2
HPS4-218ENST00000519774 LEPROTL1O95214 131 aa7.57□□□□□ -1.2
HPS4-218ENST00000519774 KIAA0087Q14695 138 aa7.57□□□□□ -1.2
HPS4-218ENST00000519774 C10orf25Q5T742 122 aa7.57□□□□□ -1.2
HPS4-218ENST00000519774 C2orf82Q6UX34 121 aa7.57□□□□□ -1.2
HPS4-218ENST00000519774 UNQ6190/PRO20217Q6UXQ8 127 aa7.57□□□□□ -1.2
HPS4-218ENST00000519774 CIRBP-AS1Q8TBR5 109 aa7.57□□□□□ -1.2
HPS4-218ENST00000519774 CHTOPQ9Y3Y2 248 aaKnown RBP7.57□□□□□ -1.2
HPS4-218ENST00000519774 LOC107984640A0A0U1RRK4 108 aa7.56□□□□□ -1.2
HPS4-218ENST00000519774 C11orf86A6NJI1 115 aa7.56□□□□□ -1.2
HPS4-218ENST00000519774 F8WDY8 70 aa7.56□□□□□ -1.2
HPS4-218ENST00000519774 H3BRM9 83 aa7.56□□□□□ -1.2
HPS4-218ENST00000519774 FABP4P15090 132 aa7.56□□□□□ -1.2
HPS4-218ENST00000519774 ZNF22P17026 224 aaPredicted RBP7.56□□□□□ -1.2
HPS4-218ENST00000519774 RPL18AQ02543 176 aaKnown RBP7.56□□□□□ -1.2
HPS4-218ENST00000519774 MAJINQ3KP22 176 aa7.56□□□□□ -1.2
HPS4-218ENST00000519774 C6orf226Q5I0X4 101 aa7.56□□□□□ -1.2
HPS4-218ENST00000519774 Q8IZM0 81 aa7.56□□□□□ -1.2
HPS4-218ENST00000519774 SPACA4Q8TDM5 124 aa7.56□□□□□ -1.2
HPS4-218ENST00000519774 MRPL35Q9NZE8 188 aaKnown RBP7.56□□□□□ -1.2
HPS4-218ENST00000519774 RYR1P21817 5038 aa7.55□□□□□ -1.2
HPS4-218ENST00000519774 APOBP04114 4563 aaKnown RBP7.55□□□□□ -1.2
HPS4-218ENST00000519774 TRAV12-1A0A0B4J245 112 aa7.55□□□□□ -1.2
HPS4-218ENST00000519774 CKS1BP61024 79 aa7.55□□□□□ -1.2
HPS4-218ENST00000519774 GAGE2BQ13066 116 aa7.55□□□□□ -1.2
HPS4-218ENST00000519774 CIRBPQ14011 172 aaKnown RBP7.55□□□□□ -1.2
HPS4-218ENST00000519774 COX7B2Q8TF08 81 aa7.55□□□□□ -1.2
HPS4-218ENST00000519774 C6orf48Q9UBA6 75 aa7.55□□□□□ -1.2
HPS4-218ENST00000519774 HSPB8Q9UJY1 196 aa7.55□□□□□ -1.2
HPS4-218ENST00000519774 HERC2O95714 4834 aa7.54□□□□□ -1.2
HPS4-218ENST00000519774 A0A087WYN8 130 aa7.54□□□□□ -1.2
HPS4-218ENST00000519774 RNF151Q2KHN1 245 aa7.54□□□□□ -1.2
HPS4-218ENST00000519774 TMEM170BQ5T4T1 132 aa7.54□□□□□ -1.2
HPS4-218ENST00000519774 Q5VSD8 79 aa7.54□□□□□ -1.2
HPS4-218ENST00000519774 TRBV30A0A0K0K1B3 111 aa7.53□□□□□ -1.2
HPS4-218ENST00000519774 EPM2AB3EWF7 344 aa7.53□□□□□ -1.2
HPS4-218ENST00000519774 F8VRH5 84 aa7.53□□□□□ -1.2
HPS4-218ENST00000519774 PTTG1IPP53801 180 aa7.53□□□□□ -1.2
HPS4-218ENST00000519774 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
HPS4-218ENST00000519774 HSPG2P98160 4391 aa7.53□□□□□ -1.2
HPS4-218ENST00000519774 CXCL5P42830 114 aa7.52□□□□□ -1.21
HPS4-218ENST00000519774 ODF1Q14990 250 aa7.52□□□□□ -1.21
HPS4-218ENST00000519774 C9orf116Q5BN46 136 aaPredicted RBP7.52□□□□□ -1.21
HPS4-218ENST00000519774 STPG4Q8N801 248 aa7.52□□□□□ -1.21
HPS4-218ENST00000519774 LINC00474Q9P2X8 69 aa7.52□□□□□ -1.21
HPS4-218ENST00000519774 IGLV5-39A0A0G2JS06 123 aa7.5□□□□□ -1.21
HPS4-218ENST00000519774 GAGE2EQ4V326 116 aa7.5□□□□□ -1.21
HPS4-218ENST00000519774 MAP1LC3CQ9BXW4 147 aa7.5□□□□□ -1.21
HPS4-218ENST00000519774 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
HPS4-218ENST00000519774 GAGE2DQ9UEU5 116 aa7.5□□□□□ -1.21
HPS4-218ENST00000519774 DNAH8Q96JB1 4490 aa7.5□□□□□ -1.21
HPS4-218ENST00000519774 COA6Q5JTJ3 125 aaKnown RBP7.49□□□□□ -1.21
HPS4-218ENST00000519774 Q6ZRP5 223 aa7.49□□□□□ -1.21
HPS4-218ENST00000519774 PMCHL2Q9BQD1 86 aa7.49□□□□□ -1.21
HPS4-218ENST00000519774 TMEM223A0PJW6 202 aa7.48□□□□□ -1.21
HPS4-218ENST00000519774 NDUFC2-KCTD14E9PQ53 114 aa7.48□□□□□ -1.21
HPS4-218ENST00000519774 TLX1NBP0CAT3 122 aa7.48□□□□□ -1.21
HPS4-218ENST00000519774 DPM2O94777 84 aa7.47□□□□□ -1.21
HPS4-218ENST00000519774 PLA2G1BP04054 148 aaKnown RBP7.47□□□□□ -1.21
HPS4-218ENST00000519774 PLNP26678 52 aa7.46□□□□□ -1.22
HPS4-218ENST00000519774 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.22
HPS4-218ENST00000519774 C7orf33Q8WU49 177 aa7.46□□□□□ -1.22
HPS4-218ENST00000519774 A0A1W2PNN7 141 aa7.45□□□□□ -1.22
HPS4-218ENST00000519774 FAM168BA1KXE4 195 aa7.45□□□□□ -1.22
HPS4-218ENST00000519774 SYS1-DBNDD2H3BUS1 97 aa7.45□□□□□ -1.22
HPS4-218ENST00000519774 IGKCP01834 107 aa7.45□□□□□ -1.22
HPS4-218ENST00000519774 FAM19A5Q7Z5A7 132 aaPredicted RBP7.45□□□□□ -1.22
HPS4-218ENST00000519774 ZNF625Q96I27 306 aaPredicted RBP7.45□□□□□ -1.22
HPS4-218ENST00000519774 H3BS24 57 aa7.44□□□□□ -1.22
HPS4-218ENST00000519774 KRTDAPP60985 99 aa7.44□□□□□ -1.22
HPS4-218ENST00000519774 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
HPS4-218ENST00000519774 XAGE1AQ9HD64 81 aa7.44□□□□□ -1.22
HPS4-218ENST00000519774 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
HPS4-218ENST00000519774 C3orf79P0CE67 100 aa7.43□□□□□ -1.22
HPS4-218ENST00000519774 PFN2P35080 140 aa7.43□□□□□ -1.22
HPS4-218ENST00000519774 HERVK_113P61574 105 aa7.43□□□□□ -1.22
HPS4-218ENST00000519774 KRTAP4-6Q9BYQ5 205 aa7.43□□□□□ -1.22
HPS4-218ENST00000519774 S100A6P06703 90 aa7.42□□□□□ -1.22
HPS4-218ENST00000519774 INAFM2P0DMQ5 153 aa7.42□□□□□ -1.22
HPS4-218ENST00000519774 LINC01545Q5VT33 79 aa7.42□□□□□ -1.22
HPS4-218ENST00000519774 PET117Q6UWS5 81 aa7.42□□□□□ -1.22
HPS4-218ENST00000519774 PHF5AQ7RTV0 110 aaKnown RBP7.42□□□□□ -1.22
HPS4-218ENST00000519774 ERG28Q9UKR5 140 aa7.42□□□□□ -1.22
HPS4-218ENST00000519774 S100A2P29034 98 aa7.41□□□□□ -1.22
HPS4-218ENST00000519774 XP32Q5T750 250 aa7.41□□□□□ -1.22
HPS4-218ENST00000519774 SFTA2Q6UW10 78 aa7.41□□□□□ -1.22
HPS4-218ENST00000519774 M0QXV9 152 aa7.4□□□□□ -1.22
HPS4-218ENST00000519774 LEPROTO15243 131 aa7.4□□□□□ -1.22
HPS4-218ENST00000519774 TSPEAR-AS2P59090 65 aa7.4□□□□□ -1.22
HPS4-218ENST00000519774 KRTAP10-4P60372 401 aaPredicted RBP7.4□□□□□ -1.22
HPS4-218ENST00000519774 HIST3H2BBQ8N257 126 aa7.4□□□□□ -1.22
HPS4-218ENST00000519774 PLEKHB2Q96CS7 222 aa7.4□□□□□ -1.22
HPS4-218ENST00000519774 NDUFA12Q9UI09 145 aa7.4□□□□□ -1.22
HPS4-218ENST00000519774 VPS13BQ7Z7G8 4022 aa7.39□□□□□ -1.23
HPS4-218ENST00000519774 A0A0U1RRA0 63 aa7.39□□□□□ -1.23
HPS4-218ENST00000519774 MEIG1Q5JSS6 88 aa7.39□□□□□ -1.23
HPS4-218ENST00000519774 SERTAD4-AS1Q5TG53 156 aa7.39□□□□□ -1.23
HPS4-218ENST00000519774 KRTAP7-1Q8IUC3 87 aa7.39□□□□□ -1.23
HPS4-218ENST00000519774 SRRM2Q9UQ35 2752 aaKnown RBP7.38□□□□□ -1.23
HPS4-218ENST00000519774 MYMXA0A1B0GTQ4 84 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms