RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 TMEM218A2RU14 115 aa15.38■□□□□ 0.05
VEGFA-220ENST00000519767 H0Y9J4 135 aa15.38■□□□□ 0.05
VEGFA-220ENST00000519767 ERASQ7Z444 233 aa15.38■□□□□ 0.05
VEGFA-220ENST00000519767 LINC01549A6NIU2 74 aa15.37■□□□□ 0.05
VEGFA-220ENST00000519767 KIAA1644Q3SXP7 199 aa15.37■□□□□ 0.05
VEGFA-220ENST00000519767 CDKN2A-AS1Q9UH64 79 aa15.37■□□□□ 0.05
VEGFA-220ENST00000519767 SCGB3A1Q96QR1 104 aa15.36■□□□□ 0.05
VEGFA-220ENST00000519767 S100PP25815 95 aa15.34■□□□□ 0.05
VEGFA-220ENST00000519767 GNB1LQ9BYB4 327 aa15.34■□□□□ 0.05
VEGFA-220ENST00000519767 F8VRH5 84 aa15.33■□□□□ 0.04
VEGFA-220ENST00000519767 ADCYAP1P18509 176 aa15.33■□□□□ 0.04
VEGFA-220ENST00000519767 CXCL5P42830 114 aa15.32■□□□□ 0.04
VEGFA-220ENST00000519767 LBHQ53QV2 105 aaPredicted RBP15.32■□□□□ 0.04
VEGFA-220ENST00000519767 PRR26Q8N8Z3 221 aa15.32■□□□□ 0.04
VEGFA-220ENST00000519767 SEC11CQ9BY50 192 aa15.32■□□□□ 0.04
VEGFA-220ENST00000519767 IGLV1-50A0A075B6I6 118 aa15.31■□□□□ 0.04
VEGFA-220ENST00000519767 COX19Q49B96 90 aa15.31■□□□□ 0.04
VEGFA-220ENST00000519767 LINC01546A6NGU7 62 aa15.3■□□□□ 0.04
VEGFA-220ENST00000519767 LINC00469Q8N7U9 141 aa15.3■□□□□ 0.04
VEGFA-220ENST00000519767 TINCRA0A1B0GVN0 87 aa15.29■□□□□ 0.04
VEGFA-220ENST00000519767 C22orf24Q9Y442 160 aa15.29■□□□□ 0.04
VEGFA-220ENST00000519767 PDZD11Q5EBL8 140 aa15.28■□□□□ 0.04
VEGFA-220ENST00000519767 XAGE1AQ9HD64 81 aa15.28■□□□□ 0.04
VEGFA-220ENST00000519767 NUPR1O60356 82 aa15.26■□□□□ 0.03
VEGFA-220ENST00000519767 CST9LQ9H4G1 147 aa15.26■□□□□ 0.03
VEGFA-220ENST00000519767 TP73-AS1Q9UF72 201 aa15.26■□□□□ 0.03
VEGFA-220ENST00000519767 RNF213Q63HN8 5207 aa15.26■□□□□ 0.03
VEGFA-220ENST00000519767 IGLV5-45A0A087WSX0 123 aa15.25■□□□□ 0.03
VEGFA-220ENST00000519767 SMIM1B2RUZ4 78 aa15.25■□□□□ 0.03
VEGFA-220ENST00000519767 IFITM2Q01629 132 aa15.25■□□□□ 0.03
VEGFA-220ENST00000519767 ZNF861PO60384 105 aa15.24■□□□□ 0.03
VEGFA-220ENST00000519767 KRTAP1-4P0C5Y4 121 aa15.24■□□□□ 0.03
VEGFA-220ENST00000519767 COX7B2Q8TF08 81 aa15.24■□□□□ 0.03
VEGFA-220ENST00000519767 FA2HQ7L5A8 372 aa15.23■□□□□ 0.03
VEGFA-220ENST00000519767 RPL13AP40429 203 aaKnown RBP15.22■□□□□ 0.03
VEGFA-220ENST00000519767 PMVKQ15126 192 aa15.22■□□□□ 0.03
VEGFA-220ENST00000519767 MRPL18Q9H0U6 180 aaKnown RBP15.22■□□□□ 0.03
VEGFA-220ENST00000519767 CARHSP1Q9Y2V2 147 aaKnown RBP15.22■□□□□ 0.03
VEGFA-220ENST00000519767 FABP9Q0Z7S8 132 aa15.21■□□□□ 0.03
VEGFA-220ENST00000519767 MRPL55Q7Z7F7 128 aaKnown RBP15.21■□□□□ 0.03
VEGFA-220ENST00000519767 SMCO4Q9NRQ5 59 aa15.21■□□□□ 0.03
VEGFA-220ENST00000519767 H3BRM9 83 aa15.17■□□□□ 0.02
VEGFA-220ENST00000519767 RHEBQ15382 184 aa15.17■□□□□ 0.02
VEGFA-220ENST00000519767 C10orf91Q5T1B1 145 aa15.17■□□□□ 0.02
VEGFA-220ENST00000519767 COMMD7Q86VX2 200 aa15.16■□□□□ 0.02
VEGFA-220ENST00000519767 SPINK8P0C7L1 97 aa15.15■□□□□ 0.02
VEGFA-220ENST00000519767 RPS10P5Q9NQ39 176 aa15.15■□□□□ 0.02
VEGFA-220ENST00000519767 RPL28P46779 137 aaKnown RBP15.14■□□□□ 0.01
VEGFA-220ENST00000519767 BCE1O60756 84 aa15.13■□□□□ 0.01
VEGFA-220ENST00000519767 RAB5BP61020 215 aa15.13■□□□□ 0.01
VEGFA-220ENST00000519767 LINC00167Q96N53 147 aa15.13■□□□□ 0.01
VEGFA-220ENST00000519767 ATP5LO75964 103 aa15.12■□□□□ 0.01
VEGFA-220ENST00000519767 IGLV5-37A0A075B6J1 123 aa15.1■□□□□ 0.01
VEGFA-220ENST00000519767 IGLC3P0DOY3 106 aa15.1■□□□□ 0.01
VEGFA-220ENST00000519767 LINC00614P0C842 121 aa15.09■□□□□ 0.01
VEGFA-220ENST00000519767 RPL37AP8A6NKH3 93 aa15.08■□□□□ 0
VEGFA-220ENST00000519767 NDUFA6P56556 154 aa15.08■□□□□ 0
VEGFA-220ENST00000519767 NKAPP1Q8N9T2 125 aa15.08■□□□□ 0
VEGFA-220ENST00000519767 TRAPPC1Q9Y5R8 145 aa15.08■□□□□ 0
VEGFA-220ENST00000519767 IGLV5-39A0A0G2JS06 123 aa15.07■□□□□ 0
VEGFA-220ENST00000519767 C18orf32Q8TCD1 76 aa15.05■□□□□ -0
VEGFA-220ENST00000519767 A0A096LNJ9 63 aa15.04■□□□□ -0
VEGFA-220ENST00000519767 GAGE10A6NGK3 116 aa15.04■□□□□ -0
VEGFA-220ENST00000519767 HBDP02042 147 aa15.04■□□□□ -0
VEGFA-220ENST00000519767 CRYGAP11844 174 aa15.02■□□□□ -0
VEGFA-220ENST00000519767 PFN2P35080 140 aa15.02■□□□□ -0
VEGFA-220ENST00000519767 COX17Q14061 63 aa15.02■□□□□ -0
VEGFA-220ENST00000519767 URB1-AS1Q96HZ7 61 aa15.02■□□□□ -0
VEGFA-220ENST00000519767 ZNF22P17026 224 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-220ENST00000519767 SFTA2Q6UW10 78 aa15□□□□□ -0.01
VEGFA-220ENST00000519767 UBE2AP49459 152 aa14.99□□□□□ -0.01
VEGFA-220ENST00000519767 PRR4Q16378 134 aa14.99□□□□□ -0.01
VEGFA-220ENST00000519767 LPAP08519 4548 aa14.98□□□□□ -0.01
VEGFA-220ENST00000519767 BAGE3Q86Y29 109 aa14.98□□□□□ -0.01
VEGFA-220ENST00000519767 ERG28Q9UKR5 140 aa14.98□□□□□ -0.01
VEGFA-220ENST00000519767 RPL24P83731 157 aaKnown RBP14.97□□□□□ -0.01
VEGFA-220ENST00000519767 KRTAP13-1Q8IUC0 172 aa14.97□□□□□ -0.01
VEGFA-220ENST00000519767 A0A087X002 238 aa14.96□□□□□ -0.01
VEGFA-220ENST00000519767 APOC3P02656 99 aa14.96□□□□□ -0.01
VEGFA-220ENST00000519767 PMCHL1Q16048 86 aa14.96□□□□□ -0.01
VEGFA-220ENST00000519767 SND1-IT1Q9HBX3 110 aa14.96□□□□□ -0.01
VEGFA-220ENST00000519767 SNAPINO95295 136 aa14.95□□□□□ -0.02
VEGFA-220ENST00000519767 NDUFA5Q16718 116 aa14.95□□□□□ -0.02
VEGFA-220ENST00000519767 TYMSOSQ8TAI1 123 aa14.95□□□□□ -0.02
VEGFA-220ENST00000519767 TMEM170BQ5T4T1 132 aa14.94□□□□□ -0.02
VEGFA-220ENST00000519767 SVBPQ8N300 66 aa14.94□□□□□ -0.02
VEGFA-220ENST00000519767 IGKV2-28A0A075B6P5 120 aa14.93□□□□□ -0.02
VEGFA-220ENST00000519767 C11orf86A6NJI1 115 aa14.93□□□□□ -0.02
VEGFA-220ENST00000519767 IGKV2D-28P01615 120 aa14.93□□□□□ -0.02
VEGFA-220ENST00000519767 VPREB1P12018 145 aa14.93□□□□□ -0.02
VEGFA-220ENST00000519767 TSPAN13O95857 204 aa14.92□□□□□ -0.02
VEGFA-220ENST00000519767 ZNF625Q96I27 306 aaPredicted RBP14.92□□□□□ -0.02
VEGFA-220ENST00000519767 SCO1O75880 301 aa14.91□□□□□ -0.02
VEGFA-220ENST00000519767 FAM229BQ4G0N7 80 aa14.91□□□□□ -0.02
VEGFA-220ENST00000519767 CHTOPQ9Y3Y2 248 aaKnown RBP14.9□□□□□ -0.02
VEGFA-220ENST00000519767 CHCHD1Q96BP2 118 aaKnown RBP14.88□□□□□ -0.03
VEGFA-220ENST00000519767 TMEM126AQ9H061 195 aa14.88□□□□□ -0.03
VEGFA-220ENST00000519767 ANAPC11Q9NYG5 84 aa14.88□□□□□ -0.03
VEGFA-220ENST00000519767 TRAV12-1A0A0B4J245 112 aa14.86□□□□□ -0.03
VEGFA-220ENST00000519767 LINC00158P58513 81 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms