RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 TTTY12Q9BZ98 90 aa1.55□□□□□ -2.16
PABPC1-211ENST00000519596 UBL5Q9BZL1 73 aa1.55□□□□□ -2.16
PABPC1-211ENST00000519596 PLAC8Q9NZF1 115 aa1.55□□□□□ -2.16
PABPC1-211ENST00000519596 DOT1LQ8TEK3 1739 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 PRR14LQ5THK1 2151 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 CTXND1A0A1B0GTU2 59 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 TRBV6-4A0A1B0GX49 114 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 SMIM27A0A1W2PRY6 76 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 JMJD7-PLA2G4BH0Y9G9 81 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 H0Y9P7 68 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 M0R3E3 92 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 PLNP26678 52 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 HCP5Q6MZN7 132 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 PP632Q6XCG6 107 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 R4GN34 69 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 V9GYV3 84 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 SAMD9LQ8IVG5 1584 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 COL4A5P29400 1685 aa1.54□□□□□ -2.16
PABPC1-211ENST00000519596 COL5A1P20908 1838 aaPredicted RBP1.54□□□□□ -2.16
PABPC1-211ENST00000519596 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 TRAV40A0A0B4J280 105 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 E9PCH4 1651 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 CAV3P56539 151 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 CACNA1DQ01668 2161 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 COX17Q14061 63 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 ZNF831Q5JPB2 1677 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 SPAG17Q6Q759 2223 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 LINC00208Q96KT6 92 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 OBSCN-AS1Q96MR7 158 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 KLK9Q9UKQ9 250 aa1.53□□□□□ -2.16
PABPC1-211ENST00000519596 CEP192Q8TEP8 1941 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 DEPDC5O75140 1603 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 SLIT1O75093 1534 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 TRAV21A0A0B4J279 112 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 IGKV3OR2-268A0A0C4DH90 116 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 TRBV6-1A0A0K0K1D8 114 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 LCE6AA0A183 80 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 LRCOL1A6NCL2 159 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 IGLV3-1P01715 115 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 IL9P15248 144 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 ZNF137PP52743 207 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 C10orf113Q5VZT2 155 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 ENHOQ6UWT2 76 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 DEFB132Q7Z7B7 95 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 WFDC9Q8NEX5 89 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 SPRR4Q96PI1 79 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 CCL26Q9Y258 94 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 DNAJC13O75165 2243 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 PRRC2BQ5JSZ5 2229 aaKnown RBP1.52□□□□□ -2.17
PABPC1-211ENST00000519596 RP1P56715 2156 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 TOGARAM1Q9Y4F4 1720 aa1.52□□□□□ -2.17
PABPC1-211ENST00000519596 DUOX1Q9NRD9 1551 aa1.51□□□□□ -2.17
PABPC1-211ENST00000519596 INTS1Q8N201 2190 aaKnown RBP1.51□□□□□ -2.17
PABPC1-211ENST00000519596 IGKV2-40A0A087WW87 121 aaPredicted RBP1.51□□□□□ -2.17
PABPC1-211ENST00000519596 A0A1W2PNN7 141 aa1.51□□□□□ -2.17
PABPC1-211ENST00000519596 IGKV2D-40P01614 121 aaPredicted RBP1.51□□□□□ -2.17
PABPC1-211ENST00000519596 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
PABPC1-211ENST00000519596 SPATA8Q6RVD6 105 aa1.51□□□□□ -2.17
PABPC1-211ENST00000519596 WFDC10AQ9H1F0 79 aa1.51□□□□□ -2.17
PABPC1-211ENST00000519596 TMEM14CQ9P0S9 112 aa1.51□□□□□ -2.17
PABPC1-211ENST00000519596 ARFGEF3Q5TH69 2177 aa1.51□□□□□ -2.17
PABPC1-211ENST00000519596 LINC01546A6NGU7 62 aa1.5□□□□□ -2.17
PABPC1-211ENST00000519596 J3QRE1 110 aa1.5□□□□□ -2.17
PABPC1-211ENST00000519596 K7EMI3 77 aa1.5□□□□□ -2.17
PABPC1-211ENST00000519596 HRES1P13985 223 aa1.5□□□□□ -2.17
PABPC1-211ENST00000519596 RPL37AP61513 92 aaKnown RBP1.5□□□□□ -2.17
PABPC1-211ENST00000519596 DEFB134Q4QY38 66 aa1.5□□□□□ -2.17
PABPC1-211ENST00000519596 LINC00322Q6ZN03 302 aaPredicted RBP1.5□□□□□ -2.17
PABPC1-211ENST00000519596 ZCCHC13Q8WW36 166 aaKnown RBP1.5□□□□□ -2.17
PABPC1-211ENST00000519596 LMO7Q8WWI1 1683 aa1.5□□□□□ -2.17
PABPC1-211ENST00000519596 C4AP0C0L4 1744 aa1.49□□□□□ -2.17
PABPC1-211ENST00000519596 TRGV4A0A0C4DH28 118 aa1.49□□□□□ -2.17
PABPC1-211ENST00000519596 RNASE3P12724 160 aaKnown RBP1.49□□□□□ -2.17
PABPC1-211ENST00000519596 SPINK7P58062 85 aa1.49□□□□□ -2.17
PABPC1-211ENST00000519596 FXYD3Q14802 87 aa1.49□□□□□ -2.17
PABPC1-211ENST00000519596 C10orf55Q5SWW7 151 aa1.49□□□□□ -2.17
PABPC1-211ENST00000519596 GAFA1Q96PS6 74 aa1.49□□□□□ -2.17
PABPC1-211ENST00000519596 CUL9Q8IWT3 2517 aa1.49□□□□□ -2.17
PABPC1-211ENST00000519596 UNC13CQ8NB66 2214 aa1.48□□□□□ -2.17
PABPC1-211ENST00000519596 A0A087WTM6 91 aa1.48□□□□□ -2.17
PABPC1-211ENST00000519596 A0A0G2JQZ4 141 aa1.48□□□□□ -2.17
PABPC1-211ENST00000519596 NBDYA0A0U1RRE5 68 aa1.48□□□□□ -2.17
PABPC1-211ENST00000519596 DEFB114Q30KQ6 69 aa1.48□□□□□ -2.17
PABPC1-211ENST00000519596 DEFB112Q30KQ8 113 aa1.48□□□□□ -2.17
PABPC1-211ENST00000519596 C5orf56Q8N8D9 126 aa1.48□□□□□ -2.17
PABPC1-211ENST00000519596 DOCK10Q96BY6 2186 aa1.48□□□□□ -2.17
PABPC1-211ENST00000519596 ABCA4P78363 2273 aa1.47□□□□□ -2.17
PABPC1-211ENST00000519596 IGLV4-60A0A075B6I1 120 aa1.47□□□□□ -2.17
PABPC1-211ENST00000519596 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.47□□□□□ -2.17
PABPC1-211ENST00000519596 IGKV2-29A2NJV5 120 aaPredicted RBP1.47□□□□□ -2.17
PABPC1-211ENST00000519596 IGIPA6NJ69 53 aa1.47□□□□□ -2.17
PABPC1-211ENST00000519596 I3L3M4 83 aa1.47□□□□□ -2.17
PABPC1-211ENST00000519596 M0R1W7 72 aa1.47□□□□□ -2.17
PABPC1-211ENST00000519596 IGLV3-19P01714 112 aa1.47□□□□□ -2.17
PABPC1-211ENST00000519596 COX6B1P14854 86 aa1.47□□□□□ -2.17
PABPC1-211ENST00000519596 TPRXLQ17RH7 258 aa1.47□□□□□ -2.17
PABPC1-211ENST00000519596 ZNF625Q96I27 306 aaPredicted RBP1.47□□□□□ -2.17
PABPC1-211ENST00000519596 A0A0G2JMZ2 1700 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 LRRC37A2A6NM11 1700 aa1.46□□□□□ -2.18
PABPC1-211ENST00000519596 LRRC37AA6NMS7 1700 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms