RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 C10orf142B7Z368 130 aa3.43□□□□□ -1.86
SQLE-203ENST00000518931 ELOF1P60002 83 aaKnown RBP3.43□□□□□ -1.86
SQLE-203ENST00000518931 PIGYQ3MUY2 71 aa3.43□□□□□ -1.86
SQLE-203ENST00000518931 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
SQLE-203ENST00000518931 ORMDL1Q9P0S3 153 aa3.43□□□□□ -1.86
SQLE-203ENST00000518931 PRO2289Q9P1D8 64 aa3.43□□□□□ -1.86
SQLE-203ENST00000518931 FREM3P0C091 2139 aa3.43□□□□□ -1.86
SQLE-203ENST00000518931 ARHGAP32A7KAX9 2087 aa3.42□□□□□ -1.86
SQLE-203ENST00000518931 TFF1P04155 84 aa3.42□□□□□ -1.86
SQLE-203ENST00000518931 CNBPP62633 177 aaKnown RBP3.42□□□□□ -1.86
SQLE-203ENST00000518931 C10orf113Q5VZT2 155 aa3.42□□□□□ -1.86
SQLE-203ENST00000518931 ENHOQ6UWT2 76 aa3.42□□□□□ -1.86
SQLE-203ENST00000518931 SDK2Q58EX2 2172 aa3.41□□□□□ -1.86
SQLE-203ENST00000518931 IGLV3-19P01714 112 aa3.41□□□□□ -1.86
SQLE-203ENST00000518931 CSAG1Q6PB30 78 aa3.41□□□□□ -1.86
SQLE-203ENST00000518931 UBL5Q9BZL1 73 aa3.41□□□□□ -1.86
SQLE-203ENST00000518931 MRPL36Q9P0J6 103 aaKnown RBP3.41□□□□□ -1.86
SQLE-203ENST00000518931 MYO7AQ13402 2215 aa3.41□□□□□ -1.86
SQLE-203ENST00000518931 LOC101927531A0A1B0GV80 90 aa3.4□□□□□ -1.87
SQLE-203ENST00000518931 NUPR2A6NF83 97 aa3.4□□□□□ -1.87
SQLE-203ENST00000518931 JMJD7-PLA2G4BH0Y9G9 81 aa3.4□□□□□ -1.87
SQLE-203ENST00000518931 PRB2P02812 416 aaPredicted RBP3.4□□□□□ -1.87
SQLE-203ENST00000518931 PRR14LQ5THK1 2151 aa3.4□□□□□ -1.87
SQLE-203ENST00000518931 SMIM2Q9BVW6 85 aa3.4□□□□□ -1.87
SQLE-203ENST00000518931 CDC42SE2Q9NRR3 84 aa3.4□□□□□ -1.87
SQLE-203ENST00000518931 LENEPQ9Y5L5 61 aa3.4□□□□□ -1.87
SQLE-203ENST00000518931 ZGRF1Q86YA3 2104 aa3.4□□□□□ -1.87
SQLE-203ENST00000518931 CTSGP08311 255 aa3.39□□□□□ -1.87
SQLE-203ENST00000518931 CRIP1P50238 77 aa3.39□□□□□ -1.87
SQLE-203ENST00000518931 NREPQ16612 68 aa3.39□□□□□ -1.87
SQLE-203ENST00000518931 GOLGA4Q13439 2230 aaKnown RBP3.39□□□□□ -1.87
SQLE-203ENST00000518931 H0YGX0 51 aa3.38□□□□□ -1.87
SQLE-203ENST00000518931 SAA2P0DJI9 122 aaPredicted RBP3.38□□□□□ -1.87
SQLE-203ENST00000518931 Q8N9L7 120 aa3.38□□□□□ -1.87
SQLE-203ENST00000518931 MPDZO75970 2070 aa3.38□□□□□ -1.87
SQLE-203ENST00000518931 SPINK9Q5DT21 86 aa3.37□□□□□ -1.87
SQLE-203ENST00000518931 NDUFA4L2Q9NRX3 87 aa3.37□□□□□ -1.87
SQLE-203ENST00000518931 HEATR5BQ9P2D3 2071 aa3.37□□□□□ -1.87
SQLE-203ENST00000518931 SHANK1Q9Y566 2161 aa3.36□□□□□ -1.87
SQLE-203ENST00000518931 LCE6AA0A183 80 aa3.36□□□□□ -1.87
SQLE-203ENST00000518931 PATE1Q8WXA2 126 aa3.36□□□□□ -1.87
SQLE-203ENST00000518931 ZNF625Q96I27 306 aaPredicted RBP3.36□□□□□ -1.87
SQLE-203ENST00000518931 CCL26Q9Y258 94 aa3.36□□□□□ -1.87
SQLE-203ENST00000518931 DIDO1Q9BTC0 2240 aaKnown RBP3.36□□□□□ -1.87
SQLE-203ENST00000518931 BPTFQ12830 3046 aa3.36□□□□□ -1.87
SQLE-203ENST00000518931 SRCAPQ6ZRS2 3230 aa3.35□□□□□ -1.87
SQLE-203ENST00000518931 KRTAP10-8P60410 259 aa3.35□□□□□ -1.87
SQLE-203ENST00000518931 WFDC9Q8NEX5 89 aa3.35□□□□□ -1.87
SQLE-203ENST00000518931 COL4A1P02462 1669 aa3.34□□□□□ -1.87
SQLE-203ENST00000518931 HRES1P13985 223 aa3.34□□□□□ -1.87
SQLE-203ENST00000518931 PRCDQ00LT1 54 aa3.34□□□□□ -1.87
SQLE-203ENST00000518931 DEFB134Q4QY38 66 aa3.34□□□□□ -1.87
SQLE-203ENST00000518931 HCP5Q6MZN7 132 aa3.34□□□□□ -1.87
SQLE-203ENST00000518931 CEP192Q8TEP8 1941 aa3.34□□□□□ -1.88
SQLE-203ENST00000518931 IGKV3-7A0A075B6H7 116 aa3.33□□□□□ -1.88
SQLE-203ENST00000518931 TRAV21A0A0B4J279 112 aa3.33□□□□□ -1.88
SQLE-203ENST00000518931 PDE6GP18545 87 aa3.33□□□□□ -1.88
SQLE-203ENST00000518931 SPAG11BQ08648 103 aa3.33□□□□□ -1.88
SQLE-203ENST00000518931 SPAG11AQ6PDA7 123 aa3.33□□□□□ -1.88
SQLE-203ENST00000518931 NOTCH2Q04721 2471 aa3.33□□□□□ -1.88
SQLE-203ENST00000518931 COL4A5P29400 1685 aa3.33□□□□□ -1.88
SQLE-203ENST00000518931 IGLV4-60A0A075B6I1 120 aa3.32□□□□□ -1.88
SQLE-203ENST00000518931 LOC110117498A0A087WWA1 95 aa3.32□□□□□ -1.88
SQLE-203ENST00000518931 NDUFB1O75438 58 aa3.32□□□□□ -1.88
SQLE-203ENST00000518931 FAM74A4Q5TZK3 123 aa3.32□□□□□ -1.88
SQLE-203ENST00000518931 ZCCHC13Q8WW36 166 aaKnown RBP3.32□□□□□ -1.88
SQLE-203ENST00000518931 PRR15LQ9BU68 103 aa3.32□□□□□ -1.88
SQLE-203ENST00000518931 CLPSL1A2RUU4 121 aa3.31□□□□□ -1.88
SQLE-203ENST00000518931 LRCOL1A6NCL2 159 aa3.31□□□□□ -1.88
SQLE-203ENST00000518931 LINC00308Q8TCZ7 52 aa3.31□□□□□ -1.88
SQLE-203ENST00000518931 ESPL1Q14674 2120 aa3.31□□□□□ -1.88
SQLE-203ENST00000518931 TRBV6-5A0A0K0K1A5 114 aa3.3□□□□□ -1.88
SQLE-203ENST00000518931 NCR3O14931 201 aa3.3□□□□□ -1.88
SQLE-203ENST00000518931 TNRC6BQ9UPQ9 1833 aaKnown RBP3.3□□□□□ -1.88
SQLE-203ENST00000518931 TRBV6-4A0A1B0GX49 114 aa3.29□□□□□ -1.88
SQLE-203ENST00000518931 NDUFA1O15239 70 aa3.29□□□□□ -1.88
SQLE-203ENST00000518931 PLAC8Q9NZF1 115 aa3.29□□□□□ -1.88
SQLE-203ENST00000518931 LINC01558Q9Y6Z2 57 aa3.29□□□□□ -1.88
SQLE-203ENST00000518931 SPTBP11277 2137 aa3.29□□□□□ -1.88
SQLE-203ENST00000518931 POLR2KP53803 58 aaKnown RBP3.28□□□□□ -1.88
SQLE-203ENST00000518931 HAMPP81172 84 aa3.28□□□□□ -1.88
SQLE-203ENST00000518931 DEFB114Q30KQ6 69 aa3.28□□□□□ -1.88
SQLE-203ENST00000518931 FDCSPQ8NFU4 85 aa3.28□□□□□ -1.88
SQLE-203ENST00000518931 MYO7BQ6PIF6 2116 aa3.28□□□□□ -1.89
SQLE-203ENST00000518931 IGKV2-29A2NJV5 120 aaPredicted RBP3.27□□□□□ -1.89
SQLE-203ENST00000518931 STATHP02808 62 aa3.27□□□□□ -1.89
SQLE-203ENST00000518931 CCL3L1P16619 93 aa3.27□□□□□ -1.89
SQLE-203ENST00000518931 COX7B2Q8TF08 81 aa3.27□□□□□ -1.89
SQLE-203ENST00000518931 CR1P17927 2039 aa3.27□□□□□ -1.89
SQLE-203ENST00000518931 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
SQLE-203ENST00000518931 A0A0G2JQZ4 141 aa3.26□□□□□ -1.89
SQLE-203ENST00000518931 LINC00208Q96KT6 92 aa3.26□□□□□ -1.89
SQLE-203ENST00000518931 MED12Q93074 2177 aa3.26□□□□□ -1.89
SQLE-203ENST00000518931 PI4KAP42356 2102 aa3.26□□□□□ -1.89
SQLE-203ENST00000518931 CACNA1CQ13936 2221 aa3.25□□□□□ -1.89
SQLE-203ENST00000518931 INTS1Q8N201 2190 aaKnown RBP3.25□□□□□ -1.89
SQLE-203ENST00000518931 MED13Q9UHV7 2174 aa3.25□□□□□ -1.89
SQLE-203ENST00000518931 IGKV2D-24A0A075B6R9 120 aa3.25□□□□□ -1.89
SQLE-203ENST00000518931 H3BRN7 92 aa3.25□□□□□ -1.89
SQLE-203ENST00000518931 COX14Q96I36 57 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms