RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 TM2D2Q9BX73 214 aa7□□□□□ -1.29
PABPC1-203ENST00000517921 COX11Q9Y6N1 276 aa7□□□□□ -1.29
PABPC1-203ENST00000517921 PRSS2P07478 247 aa6.99□□□□□ -1.29
PABPC1-203ENST00000517921 Q6ZRN7 208 aaPredicted RBP6.99□□□□□ -1.29
PABPC1-203ENST00000517921 C2orf91Q6ZV80 131 aa6.99□□□□□ -1.29
PABPC1-203ENST00000517921 FRAS1Q86XX4 4008 aa6.98□□□□□ -1.29
PABPC1-203ENST00000517921 GVQW2A0A096LPI5 108 aaPredicted RBP6.98□□□□□ -1.29
PABPC1-203ENST00000517921 HIGD2BQ4VC39 106 aa6.98□□□□□ -1.29
PABPC1-203ENST00000517921 A0A0J9YXY3 114 aa6.97□□□□□ -1.29
PABPC1-203ENST00000517921 USP17L23D6RBM5 183 aa6.97□□□□□ -1.29
PABPC1-203ENST00000517921 CXCL5P42830 114 aa6.97□□□□□ -1.29
PABPC1-203ENST00000517921 CFAP161Q6P656 301 aa6.97□□□□□ -1.29
PABPC1-203ENST00000517921 C2orf82Q6UX34 121 aa6.97□□□□□ -1.29
PABPC1-203ENST00000517921 LINC00526Q96FQ7 95 aa6.97□□□□□ -1.29
PABPC1-203ENST00000517921 HNRNPA3P51991 378 aaKnown RBP6.96□□□□□ -1.3
PABPC1-203ENST00000517921 WFDC2Q14508 124 aa6.96□□□□□ -1.3
PABPC1-203ENST00000517921 C6orf226Q5I0X4 101 aa6.96□□□□□ -1.3
PABPC1-203ENST00000517921 SCGB1D4Q6XE38 83 aa6.96□□□□□ -1.3
PABPC1-203ENST00000517921 C6orf223Q8N319 242 aa6.96□□□□□ -1.3
PABPC1-203ENST00000517921 NTN5Q8WTR8 489 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-203ENST00000517921 HIGD1BQ9P298 99 aa6.96□□□□□ -1.3
PABPC1-203ENST00000517921 LECT2O14960 151 aa6.95□□□□□ -1.3
PABPC1-203ENST00000517921 PSCAO43653 123 aa6.95□□□□□ -1.3
PABPC1-203ENST00000517921 CKS1BP61024 79 aa6.95□□□□□ -1.3
PABPC1-203ENST00000517921 HERV-K104P63124 156 aa6.95□□□□□ -1.3
PABPC1-203ENST00000517921 SFTA2Q6UW10 78 aa6.95□□□□□ -1.3
PABPC1-203ENST00000517921 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
PABPC1-203ENST00000517921 C10orf25Q5T742 122 aa6.94□□□□□ -1.3
PABPC1-203ENST00000517921 C2orf48Q96LS8 159 aa6.94□□□□□ -1.3
PABPC1-203ENST00000517921 LITAFQ99732 161 aa6.94□□□□□ -1.3
PABPC1-203ENST00000517921 LRCOL1A6NCL2 159 aa6.93□□□□□ -1.3
PABPC1-203ENST00000517921 TIMM17BO60830 172 aa6.93□□□□□ -1.3
PABPC1-203ENST00000517921 C1orf134Q5TEV5 83 aa6.93□□□□□ -1.3
PABPC1-203ENST00000517921 UNQ6190/PRO20217Q6UXQ8 127 aa6.93□□□□□ -1.3
PABPC1-203ENST00000517921 DNAH11Q96DT5 4516 aa6.92□□□□□ -1.3
PABPC1-203ENST00000517921 F8WDY8 70 aa6.92□□□□□ -1.3
PABPC1-203ENST00000517921 MEIG1Q5JSS6 88 aa6.92□□□□□ -1.3
PABPC1-203ENST00000517921 Q6ZRU5 148 aa6.92□□□□□ -1.3
PABPC1-203ENST00000517921 CAMK2N2Q96S95 79 aa6.92□□□□□ -1.3
PABPC1-203ENST00000517921 SPANXB1Q9NS25 103 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-203ENST00000517921 C6orf48Q9UBA6 75 aa6.92□□□□□ -1.3
PABPC1-203ENST00000517921 TMEM238C9JI98 176 aa6.91□□□□□ -1.3
PABPC1-203ENST00000517921 SLPIP03973 132 aa6.91□□□□□ -1.3
PABPC1-203ENST00000517921 SMIM13P0DJ93 91 aa6.91□□□□□ -1.3
PABPC1-203ENST00000517921 C14orf177Q52M58 125 aa6.91□□□□□ -1.3
PABPC1-203ENST00000517921 C9orf116Q5BN46 136 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-203ENST00000517921 ADAMTSL4-AS1Q5T5F5 129 aa6.91□□□□□ -1.3
PABPC1-203ENST00000517921 ERG28Q9UKR5 140 aa6.91□□□□□ -1.3
PABPC1-203ENST00000517921 EPPK1P58107 5090 aaKnown RBP6.91□□□□□ -1.3
PABPC1-203ENST00000517921 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.3
PABPC1-203ENST00000517921 M0R143 59 aa6.9□□□□□ -1.3
PABPC1-203ENST00000517921 HSD52Q0P140 79 aa6.9□□□□□ -1.3
PABPC1-203ENST00000517921 SYCNQ0VAF6 134 aa6.9□□□□□ -1.3
PABPC1-203ENST00000517921 CARD19Q96LW7 228 aa6.9□□□□□ -1.3
PABPC1-203ENST00000517921 SPANXDQ9BXN6 97 aa6.9□□□□□ -1.3
PABPC1-203ENST00000517921 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.3
PABPC1-203ENST00000517921 SPANXCQ9NY87 97 aa6.9□□□□□ -1.3
PABPC1-203ENST00000517921 HECTD4Q9Y4D8 3996 aa6.89□□□□□ -1.31
PABPC1-203ENST00000517921 FAT2Q9NYQ8 4349 aa6.89□□□□□ -1.31
PABPC1-203ENST00000517921 A0A0U1RRA0 63 aa6.89□□□□□ -1.31
PABPC1-203ENST00000517921 PFN2P35080 140 aa6.89□□□□□ -1.31
PABPC1-203ENST00000517921 CIRBPQ14011 172 aaKnown RBP6.89□□□□□ -1.31
PABPC1-203ENST00000517921 TAL2Q16559 108 aa6.89□□□□□ -1.31
PABPC1-203ENST00000517921 DAND5Q8N907 189 aa6.89□□□□□ -1.31
PABPC1-203ENST00000517921 BIRC6Q9NR09 4857 aa6.88□□□□□ -1.31
PABPC1-203ENST00000517921 A0A087WTM6 91 aa6.88□□□□□ -1.31
PABPC1-203ENST00000517921 RTL8CO15255 209 aa6.88□□□□□ -1.31
PABPC1-203ENST00000517921 LINC00158P58513 81 aa6.88□□□□□ -1.31
PABPC1-203ENST00000517921 SRSF9Q13242 221 aaKnown RBP eCLIP6.88□□□□□ -1.31
PABPC1-203ENST00000517921 COX17Q14061 63 aa6.88□□□□□ -1.31
PABPC1-203ENST00000517921 HIST1H4GQ99525 98 aa6.88□□□□□ -1.31
PABPC1-203ENST00000517921 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.87□□□□□ -1.31
PABPC1-203ENST00000517921 CNBPP62633 177 aaKnown RBP6.87□□□□□ -1.31
PABPC1-203ENST00000517921 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
PABPC1-203ENST00000517921 Q6ZVH6 145 aa6.87□□□□□ -1.31
PABPC1-203ENST00000517921 CEND1Q8N111 149 aa6.87□□□□□ -1.31
PABPC1-203ENST00000517921 MIR7-3HGQ8N6C7 128 aa6.87□□□□□ -1.31
PABPC1-203ENST00000517921 Q8N814 137 aa6.87□□□□□ -1.31
PABPC1-203ENST00000517921 DNAH5Q8TE73 4624 aa6.87□□□□□ -1.31
PABPC1-203ENST00000517921 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-203ENST00000517921 GCSHP23434 173 aa6.86□□□□□ -1.31
PABPC1-203ENST00000517921 HINT1P49773 126 aaPredicted RBP6.86□□□□□ -1.31
PABPC1-203ENST00000517921 FXYD2P54710 66 aa6.86□□□□□ -1.31
PABPC1-203ENST00000517921 NPC2P61916 151 aa6.86□□□□□ -1.31
PABPC1-203ENST00000517921 BVES-AS1Q5T3Y7 98 aa6.86□□□□□ -1.31
PABPC1-203ENST00000517921 SOSTDC1Q6X4U4 206 aa6.86□□□□□ -1.31
PABPC1-203ENST00000517921 TLX1NBP0CAT3 122 aa6.85□□□□□ -1.31
PABPC1-203ENST00000517921 IFITM1P13164 125 aa6.85□□□□□ -1.31
PABPC1-203ENST00000517921 PTTG1IPP53801 180 aa6.85□□□□□ -1.31
PABPC1-203ENST00000517921 TNP2Q05952 138 aa6.85□□□□□ -1.31
PABPC1-203ENST00000517921 MUSTN1Q8IVN3 82 aa6.85□□□□□ -1.31
PABPC1-203ENST00000517921 LINC00308Q8TCZ7 52 aa6.85□□□□□ -1.31
PABPC1-203ENST00000517921 SNHG12Q9BXW3 62 aa6.85□□□□□ -1.31
PABPC1-203ENST00000517921 PKD1P98161 4303 aa6.85□□□□□ -1.31
PABPC1-203ENST00000517921 A0A1B0GV90 55 aa6.84□□□□□ -1.31
PABPC1-203ENST00000517921 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
PABPC1-203ENST00000517921 EREGO14944 169 aa6.84□□□□□ -1.31
PABPC1-203ENST00000517921 SMCPP49901 116 aaPredicted RBP6.84□□□□□ -1.31
PABPC1-203ENST00000517921 LINC00336Q6ZUF6 198 aa6.84□□□□□ -1.31
PABPC1-203ENST00000517921 PPDPFQ9H3Y8 114 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms