RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 C5orf38Q86SI9 138 aa7.48□□□□□ -1.21
SPIDR-204ENST00000517824 VPS25Q9BRG1 176 aa7.48□□□□□ -1.21
SPIDR-204ENST00000517824 C11orf68Q9H3H3 251 aaKnown RBP7.48□□□□□ -1.21
SPIDR-204ENST00000517824 CRPP02741 224 aa7.47□□□□□ -1.21
SPIDR-204ENST00000517824 LINC00158P58513 81 aa7.47□□□□□ -1.21
SPIDR-204ENST00000517824 ATXN8Q156A1 80 aa7.47□□□□□ -1.21
SPIDR-204ENST00000517824 C6orf226Q5I0X4 101 aa7.47□□□□□ -1.21
SPIDR-204ENST00000517824 ADAMTSL4-AS1Q5T5F5 129 aa7.47□□□□□ -1.21
SPIDR-204ENST00000517824 DAND5Q8N907 189 aa7.47□□□□□ -1.21
SPIDR-204ENST00000517824 LINC00308Q8TCZ7 52 aa7.47□□□□□ -1.21
SPIDR-204ENST00000517824 CBY1Q9Y3M2 126 aa7.47□□□□□ -1.21
SPIDR-204ENST00000517824 G3V4G9 280 aa7.46□□□□□ -1.22
SPIDR-204ENST00000517824 COX7A2LO14548 114 aa7.46□□□□□ -1.22
SPIDR-204ENST00000517824 CKS1BP61024 79 aa7.46□□□□□ -1.22
SPIDR-204ENST00000517824 REG3AQ06141 175 aa7.46□□□□□ -1.22
SPIDR-204ENST00000517824 LINC01561Q8N1V8 128 aa7.46□□□□□ -1.22
SPIDR-204ENST00000517824 LINC00269Q8N2A0 174 aa7.46□□□□□ -1.22
SPIDR-204ENST00000517824 IGHV3OR16-9A0A0B4J2B5 98 aa7.45□□□□□ -1.22
SPIDR-204ENST00000517824 PRB2P02812 416 aaPredicted RBP7.45□□□□□ -1.22
SPIDR-204ENST00000517824 CXCL5P42830 114 aa7.45□□□□□ -1.22
SPIDR-204ENST00000517824 KPRPQ5T749 579 aaPredicted RBP7.45□□□□□ -1.22
SPIDR-204ENST00000517824 IBA57-AS1B1ANH7 110 aa7.44□□□□□ -1.22
SPIDR-204ENST00000517824 H3BNG1 76 aa7.44□□□□□ -1.22
SPIDR-204ENST00000517824 TCL1BO95988 128 aa7.44□□□□□ -1.22
SPIDR-204ENST00000517824 CD164L2Q6UWJ8 174 aa7.44□□□□□ -1.22
SPIDR-204ENST00000517824 Q8IZM0 81 aa7.44□□□□□ -1.22
SPIDR-204ENST00000517824 CHCHD10Q8WYQ3 142 aaPredicted RBP7.44□□□□□ -1.22
SPIDR-204ENST00000517824 TRBV30A0A0K0K1B3 111 aa7.43□□□□□ -1.22
SPIDR-204ENST00000517824 MTURNQ8N3F0 131 aa7.43□□□□□ -1.22
SPIDR-204ENST00000517824 SPATA25Q9BR10 227 aa7.43□□□□□ -1.22
SPIDR-204ENST00000517824 PPDPFQ9H3Y8 114 aa7.43□□□□□ -1.22
SPIDR-204ENST00000517824 DYNC2H1Q8NCM8 4307 aaKnown RBP7.42□□□□□ -1.22
SPIDR-204ENST00000517824 IGLV10-54A0A075B6I4 117 aa7.42□□□□□ -1.22
SPIDR-204ENST00000517824 TRAV13-2A0A0B4J235 113 aa7.42□□□□□ -1.22
SPIDR-204ENST00000517824 A0A0J9YWU9 116 aa7.42□□□□□ -1.22
SPIDR-204ENST00000517824 PFN2P35080 140 aa7.42□□□□□ -1.22
SPIDR-204ENST00000517824 MIR7-3HGQ8N6C7 128 aa7.42□□□□□ -1.22
SPIDR-204ENST00000517824 C11orf45Q8TAV5 145 aa7.42□□□□□ -1.22
SPIDR-204ENST00000517824 SACSQ9NZJ4 4579 aa7.41□□□□□ -1.22
SPIDR-204ENST00000517824 C9JAW5 83 aa7.41□□□□□ -1.22
SPIDR-204ENST00000517824 TRIAP1O43715 76 aa7.41□□□□□ -1.22
SPIDR-204ENST00000517824 WFDC2Q14508 124 aa7.41□□□□□ -1.22
SPIDR-204ENST00000517824 SND1-IT1Q9HBX3 110 aa7.41□□□□□ -1.22
SPIDR-204ENST00000517824 GAGE12HA6NDE8 117 aa7.4□□□□□ -1.22
SPIDR-204ENST00000517824 ETDBQ3ZM63 59 aa7.4□□□□□ -1.22
SPIDR-204ENST00000517824 Q6ZTC4 211 aa7.4□□□□□ -1.22
SPIDR-204ENST00000517824 KLK12Q9UKR0 248 aa7.4□□□□□ -1.22
SPIDR-204ENST00000517824 DEFB131BA0A096LNP1 70 aa7.39□□□□□ -1.23
SPIDR-204ENST00000517824 EIF4EBP3O60516 100 aaPredicted RBP7.39□□□□□ -1.23
SPIDR-204ENST00000517824 SPAG11BQ08648 103 aa7.39□□□□□ -1.23
SPIDR-204ENST00000517824 LYPD5Q6UWN5 251 aa7.39□□□□□ -1.23
SPIDR-204ENST00000517824 TRAV8-4A0A0B4J246 113 aa7.38□□□□□ -1.23
SPIDR-204ENST00000517824 SLC25A20O43772 301 aa7.38□□□□□ -1.23
SPIDR-204ENST00000517824 NANOS2P60321 138 aaKnown RBP7.38□□□□□ -1.23
SPIDR-204ENST00000517824 LINC01620Q4KN68 170 aa7.38□□□□□ -1.23
SPIDR-204ENST00000517824 DEFB121Q5J5C9 76 aa7.38□□□□□ -1.23
SPIDR-204ENST00000517824 MRAPQ8TCY5 172 aa7.38□□□□□ -1.23
SPIDR-204ENST00000517824 PPDPFLQ8WWR9 84 aa7.38□□□□□ -1.23
SPIDR-204ENST00000517824 PRO0461Q9UI25 63 aa7.38□□□□□ -1.23
SPIDR-204ENST00000517824 DNAH7Q8WXX0 4024 aa7.38□□□□□ -1.23
SPIDR-204ENST00000517824 HUWE1Q7Z6Z7 4374 aaKnown RBP7.37□□□□□ -1.23
SPIDR-204ENST00000517824 TRAV10A0A0B4J240 114 aa7.37□□□□□ -1.23
SPIDR-204ENST00000517824 TNP2Q05952 138 aa7.37□□□□□ -1.23
SPIDR-204ENST00000517824 SOSTDC1Q6X4U4 206 aa7.37□□□□□ -1.23
SPIDR-204ENST00000517824 TEN1Q86WV5 123 aa7.37□□□□□ -1.23
SPIDR-204ENST00000517824 UBE2WQ96B02 151 aa7.37□□□□□ -1.23
SPIDR-204ENST00000517824 COX17Q14061 63 aa7.36□□□□□ -1.23
SPIDR-204ENST00000517824 Q8N3U1 123 aa7.36□□□□□ -1.23
SPIDR-204ENST00000517824 C15orf53Q8NAA6 179 aa7.36□□□□□ -1.23
SPIDR-204ENST00000517824 OR13C6PQ8NH95 151 aa7.36□□□□□ -1.23
SPIDR-204ENST00000517824 M0QXV9 152 aa7.35□□□□□ -1.23
SPIDR-204ENST00000517824 FOXI1Q12951 378 aa7.35□□□□□ -1.23
SPIDR-204ENST00000517824 C2orf82Q6UX34 121 aa7.35□□□□□ -1.23
SPIDR-204ENST00000517824 ANKRD29Q8N6D5 301 aa7.35□□□□□ -1.23
SPIDR-204ENST00000517824 CLEC2BQ92478 149 aa7.35□□□□□ -1.23
SPIDR-204ENST00000517824 STAB2Q8WWQ8 2551 aa7.34□□□□□ -1.23
SPIDR-204ENST00000517824 TRBV10-2A0A0K0K1G8 114 aa7.34□□□□□ -1.23
SPIDR-204ENST00000517824 H3BT86 120 aa7.34□□□□□ -1.23
SPIDR-204ENST00000517824 LST1O00453 97 aa7.34□□□□□ -1.23
SPIDR-204ENST00000517824 CCL18P55774 89 aa7.34□□□□□ -1.23
SPIDR-204ENST00000517824 WFDC10BQ8IUB3 73 aa7.34□□□□□ -1.23
SPIDR-204ENST00000517824 MUC7Q8TAX7 377 aa7.34□□□□□ -1.23
SPIDR-204ENST00000517824 PRR34Q9NV39 138 aa7.34□□□□□ -1.23
SPIDR-204ENST00000517824 KLK5Q9Y337 293 aaPredicted RBP7.34□□□□□ -1.23
SPIDR-204ENST00000517824 DNAH1Q9P2D7 4330 aa7.33□□□□□ -1.24
SPIDR-204ENST00000517824 DNAL4O96015 105 aa7.33□□□□□ -1.24
SPIDR-204ENST00000517824 CARD19Q96LW7 228 aa7.33□□□□□ -1.24
SPIDR-204ENST00000517824 C1orf43Q9BWL3 253 aa7.33□□□□□ -1.24
SPIDR-204ENST00000517824 K7EIL1 84 aa7.32□□□□□ -1.24
SPIDR-204ENST00000517824 ZNF561-AS1K7EIQ3 104 aa7.32□□□□□ -1.24
SPIDR-204ENST00000517824 RYR2Q92736 4967 aa7.32□□□□□ -1.24
SPIDR-204ENST00000517824 SNCGO76070 127 aa7.31□□□□□ -1.24
SPIDR-204ENST00000517824 TM2D3Q9BRN9 247 aa7.31□□□□□ -1.24
SPIDR-204ENST00000517824 TRACP01848 142 aa7.3□□□□□ -1.24
SPIDR-204ENST00000517824 RPL28P46779 137 aaKnown RBP7.3□□□□□ -1.24
SPIDR-204ENST00000517824 LINC01556Q5JQF7 62 aa7.3□□□□□ -1.24
SPIDR-204ENST00000517824 ENHOQ6UWT2 76 aa7.3□□□□□ -1.24
SPIDR-204ENST00000517824 LINC00337Q8N6G1 96 aa7.3□□□□□ -1.24
SPIDR-204ENST00000517824 RMI2Q96E14 147 aa7.3□□□□□ -1.24
SPIDR-204ENST00000517824 LYSTQ99698 3801 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms