RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 NXT2Q9NPJ8 142 aaKnown RBP-3.34□□□□□ -2.94
SNORA40.15-201ENST00000516884 QRICH2Q9H0J4 1663 aa-3.34□□□□□ -2.94
SNORA40.15-201ENST00000516884 ARHGEF5Q12774 1597 aa-3.34□□□□□ -2.94
SNORA40.15-201ENST00000516884 TET3O43151 1660 aa-3.35□□□□□ -2.95
SNORA40.15-201ENST00000516884 CDC26Q8NHZ8 85 aa-3.35□□□□□ -2.95
SNORA40.15-201ENST00000516884 FAIMQ9NVQ4 179 aa-3.35□□□□□ -2.95
SNORA40.15-201ENST00000516884 LOC100130705A0A1B0GUX0 176 aa-3.36□□□□□ -2.95
SNORA40.15-201ENST00000516884 WHAMMP3Q1A5X7 153 aa-3.36□□□□□ -2.95
SNORA40.15-201ENST00000516884 KCNRGQ8N5I3 272 aa-3.36□□□□□ -2.95
SNORA40.15-201ENST00000516884 CDC42SE2Q9NRR3 84 aa-3.36□□□□□ -2.95
SNORA40.15-201ENST00000516884 SPANXA1Q9NS26 97 aa-3.36□□□□□ -2.95
SNORA40.15-201ENST00000516884 XRN1Q8IZH2 1706 aaKnown RBP-3.36□□□□□ -2.95
SNORA40.15-201ENST00000516884 NBEAP1P0C6P0 100 aa-3.37□□□□□ -2.95
SNORA40.15-201ENST00000516884 WFDC13Q8IUB5 93 aa-3.37□□□□□ -2.95
SNORA40.15-201ENST00000516884 MYOZ3Q8TDC0 251 aa-3.37□□□□□ -2.95
SNORA40.15-201ENST00000516884 PRO1933Q9H354 126 aa-3.37□□□□□ -2.95
SNORA40.15-201ENST00000516884 FABP1P07148 127 aa-3.38□□□□□ -2.95
SNORA40.15-201ENST00000516884 MRPL34Q9BQ48 92 aaKnown RBP-3.38□□□□□ -2.95
SNORA40.15-201ENST00000516884 PSME4Q14997 1843 aa-3.38□□□□□ -2.95
SNORA40.15-201ENST00000516884 ANKRD50Q9ULJ7 1429 aa-3.38□□□□□ -2.95
SNORA40.15-201ENST00000516884 ACACBO00763 2458 aa-3.39□□□□□ -2.95
SNORA40.15-201ENST00000516884 C12orf73Q69YU5 71 aa-3.39□□□□□ -2.95
SNORA40.15-201ENST00000516884 NCOA3Q9Y6Q9 1424 aa-3.39□□□□□ -2.95
SNORA40.15-201ENST00000516884 C5orf42Q9H799 3197 aa-3.4□□□□□ -2.95
SNORA40.15-201ENST00000516884 J3QR89 54 aa-3.4□□□□□ -2.95
SNORA40.15-201ENST00000516884 FAM223AQ8IWN6 122 aa-3.4□□□□□ -2.95
SNORA40.15-201ENST00000516884 CDKN2A-AS1Q9UH64 79 aa-3.4□□□□□ -2.95
SNORA40.15-201ENST00000516884 V9GYQ6 96 aa-3.4□□□□□ -2.95
SNORA40.15-201ENST00000516884 SPEF2Q9C093 1822 aa-3.41□□□□□ -2.96
SNORA40.15-201ENST00000516884 CCL22O00626 93 aa-3.41□□□□□ -2.96
SNORA40.15-201ENST00000516884 HIST1H1DP16402 221 aaKnown RBP-3.41□□□□□ -2.96
SNORA40.15-201ENST00000516884 SEC11AP67812 179 aa-3.41□□□□□ -2.96
SNORA40.15-201ENST00000516884 HEPN1Q6WQI6 88 aa-3.41□□□□□ -2.96
SNORA40.15-201ENST00000516884 SMIM3Q9BZL3 60 aa-3.41□□□□□ -2.96
SNORA40.15-201ENST00000516884 PLEKHH2Q8IVE3 1493 aa-3.41□□□□□ -2.96
SNORA40.15-201ENST00000516884 DPH3Q96FX2 82 aa-3.42□□□□□ -2.96
SNORA40.15-201ENST00000516884 CHD7Q9P2D1 2997 aa-3.42□□□□□ -2.96
SNORA40.15-201ENST00000516884 COL14A1Q05707 1796 aaKnown RBP-3.43□□□□□ -2.96
SNORA40.15-201ENST00000516884 SMG6Q86US8 1419 aaKnown RBP-3.43□□□□□ -2.96
SNORA40.15-201ENST00000516884 H0YAA0 97 aa-3.43□□□□□ -2.96
SNORA40.15-201ENST00000516884 LSM10Q969L4 123 aaKnown RBP-3.43□□□□□ -2.96
SNORA40.15-201ENST00000516884 HIGD1BQ9P298 99 aa-3.43□□□□□ -2.96
SNORA40.15-201ENST00000516884 NEFHP12036 1026 aa-3.44□□□□□ -2.96
SNORA40.15-201ENST00000516884 KRTAP19-5Q3LI72 72 aa-3.44□□□□□ -2.96
SNORA40.15-201ENST00000516884 AKAP14Q86UN6 197 aa-3.44□□□□□ -2.96
SNORA40.15-201ENST00000516884 ARL2-SNX15V9GYD0 113 aa-3.44□□□□□ -2.96
SNORA40.15-201ENST00000516884 TRAV30A0A087WSZ9 112 aa-3.45□□□□□ -2.96
SNORA40.15-201ENST00000516884 CHKB-CPT1BH3BT56 60 aa-3.45□□□□□ -2.96
SNORA40.15-201ENST00000516884 K7ERU9 68 aa-3.45□□□□□ -2.96
SNORA40.15-201ENST00000516884 TMEM191AQ9H0A3 160 aa-3.45□□□□□ -2.96
SNORA40.15-201ENST00000516884 GSKIPQ9P0R6 139 aa-3.45□□□□□ -2.96
SNORA40.15-201ENST00000516884 COPZ2Q9P299 210 aa-3.45□□□□□ -2.96
SNORA40.15-201ENST00000516884 ITPR1Q14643 2758 aa-3.45□□□□□ -2.96
SNORA40.15-201ENST00000516884 CEP295Q9C0D2 2601 aa-3.46□□□□□ -2.96
SNORA40.15-201ENST00000516884 M0R2Z0 102 aa-3.46□□□□□ -2.96
SNORA40.15-201ENST00000516884 SPANXDQ9BXN6 97 aa-3.46□□□□□ -2.96
SNORA40.15-201ENST00000516884 FHAD1B1AJZ9 1412 aa-3.46□□□□□ -2.96
SNORA40.15-201ENST00000516884 ADGRL2O95490 1459 aa-3.47□□□□□ -2.96
SNORA40.15-201ENST00000516884 A0A1B0GU69 56 aa-3.47□□□□□ -2.96
SNORA40.15-201ENST00000516884 SMIM15Q7Z3B0 74 aa-3.47□□□□□ -2.96
SNORA40.15-201ENST00000516884 RANBP2P49792 3224 aaKnown RBP-3.47□□□□□ -2.97
SNORA40.15-201ENST00000516884 NLRP1Q9C000 1473 aa-3.47□□□□□ -2.97
SNORA40.15-201ENST00000516884 LINC00846Q9NV44 126 aa-3.48□□□□□ -2.97
SNORA40.15-201ENST00000516884 EDC4Q6P2E9 1401 aaKnown RBP-3.48□□□□□ -2.97
SNORA40.15-201ENST00000516884 CFTRP13569 1480 aa-3.48□□□□□ -2.97
SNORA40.15-201ENST00000516884 EHBP1L1Q8N3D4 1523 aa-3.49□□□□□ -2.97
SNORA40.15-201ENST00000516884 CPSF1Q10570 1443 aaKnown RBP-3.5□□□□□ -2.97
SNORA40.15-201ENST00000516884 DEFB1P60022 68 aa-3.5□□□□□ -2.97
SNORA40.15-201ENST00000516884 MT1XP80297 61 aa-3.5□□□□□ -2.97
SNORA40.15-201ENST00000516884 SMCO1Q147U7 214 aa-3.5□□□□□ -2.97
SNORA40.15-201ENST00000516884 C5orf38Q86SI9 138 aa-3.5□□□□□ -2.97
SNORA40.15-201ENST00000516884 CCDC167Q9P0B6 97 aa-3.5□□□□□ -2.97
SNORA40.15-201ENST00000516884 KIAA1551Q9HCM1 1747 aa-3.5□□□□□ -2.97
SNORA40.15-201ENST00000516884 CSMD1Q96PZ7 3565 aa-3.51□□□□□ -2.97
SNORA40.15-201ENST00000516884 K7EP34 96 aa-3.51□□□□□ -2.97
SNORA40.15-201ENST00000516884 TCEAL4Q96EI5 215 aa-3.51□□□□□ -2.97
SNORA40.15-201ENST00000516884 LINC00474Q9P2X8 69 aa-3.51□□□□□ -2.97
SNORA40.15-201ENST00000516884 SERP1Q9Y6X1 66 aa-3.51□□□□□ -2.97
SNORA40.15-201ENST00000516884 MAP3K1Q13233 1512 aa-3.51□□□□□ -2.97
SNORA40.15-201ENST00000516884 SHROOM2Q13796 1616 aa-3.52□□□□□ -2.97
SNORA40.15-201ENST00000516884 TPT1P8Q9HAU6 139 aa-3.52□□□□□ -2.97
SNORA40.15-201ENST00000516884 UQCR10Q9UDW1 63 aa-3.52□□□□□ -2.97
SNORA40.15-201ENST00000516884 CLIP1P30622 1438 aa-3.53□□□□□ -2.97
SNORA40.15-201ENST00000516884 A0A1B0GWA3 101 aa-3.53□□□□□ -2.97
SNORA40.15-201ENST00000516884 CKS1BP61024 79 aa-3.53□□□□□ -2.97
SNORA40.15-201ENST00000516884 COPZ1P61923 177 aa-3.53□□□□□ -2.97
SNORA40.15-201ENST00000516884 RPS25P62851 125 aaKnown RBP-3.53□□□□□ -2.97
SNORA40.15-201ENST00000516884 LRRC37AA6NMS7 1700 aa-3.53□□□□□ -2.98
SNORA40.15-201ENST00000516884 C9orf153Q5TBE3 101 aa-3.54□□□□□ -2.98
SNORA40.15-201ENST00000516884 PDCD10Q9BUL8 212 aa-3.54□□□□□ -2.98
SNORA40.15-201ENST00000516884 SCN7AQ01118 1682 aa-3.55□□□□□ -2.98
SNORA40.15-201ENST00000516884 SAA2P0DJI9 122 aaPredicted RBP-3.55□□□□□ -2.98
SNORA40.15-201ENST00000516884 SCGB1A1P11684 91 aa-3.55□□□□□ -2.98
SNORA40.15-201ENST00000516884 COMMD6Q7Z4G1 85 aa-3.55□□□□□ -2.98
SNORA40.15-201ENST00000516884 COPS9Q8WXC6 57 aa-3.55□□□□□ -2.98
SNORA40.15-201ENST00000516884 PPP3R2Q96LZ3 170 aa-3.55□□□□□ -2.98
SNORA40.15-201ENST00000516884 RERGLQ9H628 205 aa-3.55□□□□□ -2.98
SNORA40.15-201ENST00000516884 NUP188Q5SRE5 1749 aa-3.56□□□□□ -2.98
SNORA40.15-201ENST00000516884 C6orf201Q7Z4U5 140 aa-3.56□□□□□ -2.98
SNORA40.15-201ENST00000516884 ARL11Q969Q4 196 aa-3.56□□□□□ -2.98
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms