RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 CDKN2A-AS1Q9UH64 79 aa8.02□□□□□ -1.13
PFDN1-206ENST00000514611 C6orf226Q5I0X4 101 aa8.01□□□□□ -1.13
PFDN1-206ENST00000514611 ALKBH7Q9BT30 221 aaPredicted RBP8.01□□□□□ -1.13
PFDN1-206ENST00000514611 XAGE1AQ9HD64 81 aa8.01□□□□□ -1.13
PFDN1-206ENST00000514611 HERVK_113P63121 156 aa8□□□□□ -1.13
PFDN1-206ENST00000514611 TOMM6Q96B49 74 aa8□□□□□ -1.13
PFDN1-206ENST00000514611 TIMM17AQ99595 171 aa8□□□□□ -1.13
PFDN1-206ENST00000514611 CLLU1Q5K131 121 aa7.99□□□□□ -1.13
PFDN1-206ENST00000514611 GEMIN7Q9H840 131 aaKnown RBP7.99□□□□□ -1.13
PFDN1-206ENST00000514611 C22orf24Q9Y442 160 aa7.99□□□□□ -1.13
PFDN1-206ENST00000514611 IGLV1-50A0A075B6I6 118 aa7.98□□□□□ -1.13
PFDN1-206ENST00000514611 PAPPA-AS1Q5QFB9 102 aa7.98□□□□□ -1.13
PFDN1-206ENST00000514611 SMIM1B2RUZ4 78 aa7.97□□□□□ -1.13
PFDN1-206ENST00000514611 F8VRH5 84 aa7.97□□□□□ -1.13
PFDN1-206ENST00000514611 SEC11AP67812 179 aa7.97□□□□□ -1.13
PFDN1-206ENST00000514611 ERASQ7Z444 233 aa7.96□□□□□ -1.14
PFDN1-206ENST00000514611 SCGB3A1Q96QR1 104 aa7.96□□□□□ -1.14
PFDN1-206ENST00000514611 NUPR1O60356 82 aa7.95□□□□□ -1.14
PFDN1-206ENST00000514611 ZNF861PO60384 105 aa7.95□□□□□ -1.14
PFDN1-206ENST00000514611 G0S2P27469 103 aa7.95□□□□□ -1.14
PFDN1-206ENST00000514611 CXCL5P42830 114 aa7.95□□□□□ -1.14
PFDN1-206ENST00000514611 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
PFDN1-206ENST00000514611 TMEM218A2RU14 115 aa7.94□□□□□ -1.14
PFDN1-206ENST00000514611 MRPL55Q7Z7F7 128 aaKnown RBP7.94□□□□□ -1.14
PFDN1-206ENST00000514611 IGLV5-45A0A087WSX0 123 aa7.93□□□□□ -1.14
PFDN1-206ENST00000514611 TINCRA0A1B0GVN0 87 aa7.93□□□□□ -1.14
PFDN1-206ENST00000514611 SPINK8P0C7L1 97 aa7.93□□□□□ -1.14
PFDN1-206ENST00000514611 LBHQ53QV2 105 aaPredicted RBP7.93□□□□□ -1.14
PFDN1-206ENST00000514611 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
PFDN1-206ENST00000514611 COX7B2Q8TF08 81 aa7.93□□□□□ -1.14
PFDN1-206ENST00000514611 LINC01546A6NGU7 62 aa7.92□□□□□ -1.14
PFDN1-206ENST00000514611 RPL13AP40429 203 aaKnown RBP7.92□□□□□ -1.14
PFDN1-206ENST00000514611 PDZD11Q5EBL8 140 aa7.92□□□□□ -1.14
PFDN1-206ENST00000514611 TP73-AS1Q9UF72 201 aa7.92□□□□□ -1.14
PFDN1-206ENST00000514611 RPL37AP8A6NKH3 93 aa7.91□□□□□ -1.14
PFDN1-206ENST00000514611 IFITM2Q01629 132 aa7.91□□□□□ -1.14
PFDN1-206ENST00000514611 GNB1LQ9BYB4 327 aa7.91□□□□□ -1.14
PFDN1-206ENST00000514611 CST9LQ9H4G1 147 aa7.91□□□□□ -1.14
PFDN1-206ENST00000514611 CARHSP1Q9Y2V2 147 aaKnown RBP7.91□□□□□ -1.14
PFDN1-206ENST00000514611 GAGE10A6NGK3 116 aa7.9□□□□□ -1.14
PFDN1-206ENST00000514611 BCE1O60756 84 aa7.9□□□□□ -1.14
PFDN1-206ENST00000514611 S100PP25815 95 aa7.9□□□□□ -1.14
PFDN1-206ENST00000514611 RAB5BP61020 215 aa7.9□□□□□ -1.14
PFDN1-206ENST00000514611 LINC00167Q96N53 147 aa7.9□□□□□ -1.14
PFDN1-206ENST00000514611 SEC11CQ9BY50 192 aa7.9□□□□□ -1.14
PFDN1-206ENST00000514611 A0A087X002 238 aa7.89□□□□□ -1.15
PFDN1-206ENST00000514611 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
PFDN1-206ENST00000514611 PMVKQ15126 192 aa7.89□□□□□ -1.15
PFDN1-206ENST00000514611 PRR4Q16378 134 aa7.89□□□□□ -1.15
PFDN1-206ENST00000514611 FA2HQ7L5A8 372 aa7.89□□□□□ -1.15
PFDN1-206ENST00000514611 MRPL18Q9H0U6 180 aaKnown RBP7.89□□□□□ -1.15
PFDN1-206ENST00000514611 SMCO4Q9NRQ5 59 aa7.89□□□□□ -1.15
PFDN1-206ENST00000514611 RPL28P46779 137 aaKnown RBP7.88□□□□□ -1.15
PFDN1-206ENST00000514611 LINC01549A6NIU2 74 aa7.87□□□□□ -1.15
PFDN1-206ENST00000514611 SCO1O75880 301 aa7.87□□□□□ -1.15
PFDN1-206ENST00000514611 FABP9Q0Z7S8 132 aa7.87□□□□□ -1.15
PFDN1-206ENST00000514611 COMMD7Q86VX2 200 aa7.87□□□□□ -1.15
PFDN1-206ENST00000514611 MUC2Q02817 5179 aa7.87□□□□□ -1.15
PFDN1-206ENST00000514611 IGLV5-37A0A075B6J1 123 aa7.86□□□□□ -1.15
PFDN1-206ENST00000514611 A0A096LNJ9 63 aa7.86□□□□□ -1.15
PFDN1-206ENST00000514611 TSPAN13O95857 204 aa7.86□□□□□ -1.15
PFDN1-206ENST00000514611 H3BRM9 83 aa7.85□□□□□ -1.15
PFDN1-206ENST00000514611 ATP5LO75964 103 aa7.85□□□□□ -1.15
PFDN1-206ENST00000514611 IGLC3P0DOY3 106 aa7.85□□□□□ -1.15
PFDN1-206ENST00000514611 NKAPP1Q8N9T2 125 aa7.85□□□□□ -1.15
PFDN1-206ENST00000514611 URB1-AS1Q96HZ7 61 aa7.85□□□□□ -1.15
PFDN1-206ENST00000514611 ANAPC11Q9NYG5 84 aa7.85□□□□□ -1.15
PFDN1-206ENST00000514611 IGKV2-28A0A075B6P5 120 aa7.84□□□□□ -1.15
PFDN1-206ENST00000514611 IGKV2D-28P01615 120 aa7.84□□□□□ -1.15
PFDN1-206ENST00000514611 PFN2P35080 140 aa7.84□□□□□ -1.15
PFDN1-206ENST00000514611 COX19Q49B96 90 aa7.84□□□□□ -1.15
PFDN1-206ENST00000514611 KRTAP13-1Q8IUC0 172 aa7.84□□□□□ -1.15
PFDN1-206ENST00000514611 RPS10P5Q9NQ39 176 aa7.84□□□□□ -1.15
PFDN1-206ENST00000514611 IGLV5-39A0A0G2JS06 123 aa7.83□□□□□ -1.16
PFDN1-206ENST00000514611 CRYGAP11844 174 aa7.83□□□□□ -1.16
PFDN1-206ENST00000514611 ZNF22P17026 224 aaPredicted RBP7.83□□□□□ -1.16
PFDN1-206ENST00000514611 UBE2AP49459 152 aa7.83□□□□□ -1.16
PFDN1-206ENST00000514611 NDUFA6P56556 154 aa7.83□□□□□ -1.16
PFDN1-206ENST00000514611 RHEBQ15382 184 aa7.83□□□□□ -1.16
PFDN1-206ENST00000514611 PMCHL1Q16048 86 aa7.83□□□□□ -1.16
PFDN1-206ENST00000514611 TYMSOSQ8TAI1 123 aa7.83□□□□□ -1.16
PFDN1-206ENST00000514611 C10orf91Q5T1B1 145 aa7.82□□□□□ -1.16
PFDN1-206ENST00000514611 C18orf32Q8TCD1 76 aa7.82□□□□□ -1.16
PFDN1-206ENST00000514611 PRLHP81277 87 aa7.81□□□□□ -1.16
PFDN1-206ENST00000514611 KRTAP13-2Q52LG2 175 aa7.81□□□□□ -1.16
PFDN1-206ENST00000514611 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
PFDN1-206ENST00000514611 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
PFDN1-206ENST00000514611 HBDP02042 147 aa7.8□□□□□ -1.16
PFDN1-206ENST00000514611 VPREB1P12018 145 aa7.8□□□□□ -1.16
PFDN1-206ENST00000514611 Q8NDZ9 215 aa7.8□□□□□ -1.16
PFDN1-206ENST00000514611 SND1-IT1Q9HBX3 110 aa7.8□□□□□ -1.16
PFDN1-206ENST00000514611 TRAPPC1Q9Y5R8 145 aa7.8□□□□□ -1.16
PFDN1-206ENST00000514611 C11orf86A6NJI1 115 aa7.79□□□□□ -1.16
PFDN1-206ENST00000514611 TMEM238C9JI98 176 aa7.79□□□□□ -1.16
PFDN1-206ENST00000514611 LINC00614P0C842 121 aa7.79□□□□□ -1.16
PFDN1-206ENST00000514611 TMEM126AQ9H061 195 aa7.78□□□□□ -1.16
PFDN1-206ENST00000514611 LCE2BO14633 110 aa7.77□□□□□ -1.17
PFDN1-206ENST00000514611 TMEM170BQ5T4T1 132 aa7.77□□□□□ -1.17
PFDN1-206ENST00000514611 FAM19A1Q7Z5A9 133 aa7.77□□□□□ -1.17
PFDN1-206ENST00000514611 BAGE3Q86Y29 109 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms