RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 C6orf48Q9UBA6 75 aa7.85□□□□□ -1.15
COPB2-212ENST00000514508 TRBV30A0A0K0K1B3 111 aa7.84□□□□□ -1.15
COPB2-212ENST00000514508 TLX1NBP0CAT3 122 aa7.84□□□□□ -1.15
COPB2-212ENST00000514508 IGLC3P0DOY3 106 aa7.84□□□□□ -1.15
COPB2-212ENST00000514508 RPL18AQ02543 176 aaKnown RBP7.84□□□□□ -1.15
COPB2-212ENST00000514508 C6orf226Q5I0X4 101 aa7.84□□□□□ -1.15
COPB2-212ENST00000514508 SMIM1B2RUZ4 78 aa7.83□□□□□ -1.16
COPB2-212ENST00000514508 H3BRM9 83 aa7.83□□□□□ -1.16
COPB2-212ENST00000514508 SCO1O75880 301 aa7.83□□□□□ -1.16
COPB2-212ENST00000514508 CKS1BP61024 79 aa7.83□□□□□ -1.16
COPB2-212ENST00000514508 C2orf82Q6UX34 121 aa7.83□□□□□ -1.16
COPB2-212ENST00000514508 CXCL5P42830 114 aa7.82□□□□□ -1.16
COPB2-212ENST00000514508 RPL37AP61513 92 aaKnown RBP7.82□□□□□ -1.16
COPB2-212ENST00000514508 SERF1AO75920 110 aa7.81□□□□□ -1.16
COPB2-212ENST00000514508 KRTAP10-4P60372 401 aaPredicted RBP7.81□□□□□ -1.16
COPB2-212ENST00000514508 FAM19A2Q8N3H0 131 aa7.81□□□□□ -1.16
COPB2-212ENST00000514508 C7orf33Q8WU49 177 aa7.81□□□□□ -1.16
COPB2-212ENST00000514508 IFI27L1Q96BM0 104 aa7.81□□□□□ -1.16
COPB2-212ENST00000514508 TRAV12-1A0A0B4J245 112 aa7.8□□□□□ -1.16
COPB2-212ENST00000514508 F8VRH5 84 aa7.8□□□□□ -1.16
COPB2-212ENST00000514508 SPINK8P0C7L1 97 aa7.8□□□□□ -1.16
COPB2-212ENST00000514508 Q6ZRP5 223 aa7.8□□□□□ -1.16
COPB2-212ENST00000514508 COX7B2Q8TF08 81 aa7.8□□□□□ -1.16
COPB2-212ENST00000514508 CHTOPQ9Y3Y2 248 aaKnown RBP7.8□□□□□ -1.16
COPB2-212ENST00000514508 NDUFC2-KCTD14E9PQ53 114 aa7.79□□□□□ -1.16
COPB2-212ENST00000514508 ZNF22P17026 224 aaPredicted RBP7.79□□□□□ -1.16
COPB2-212ENST00000514508 LINC00310P59036 64 aa7.79□□□□□ -1.16
COPB2-212ENST00000514508 A0A1W2PNN7 141 aa7.78□□□□□ -1.16
COPB2-212ENST00000514508 C11orf86A6NJI1 115 aa7.78□□□□□ -1.16
COPB2-212ENST00000514508 LEPROTL1O95214 131 aa7.78□□□□□ -1.16
COPB2-212ENST00000514508 GAGE2EQ4V326 116 aa7.78□□□□□ -1.16
COPB2-212ENST00000514508 C9orf116Q5BN46 136 aaPredicted RBP7.78□□□□□ -1.16
COPB2-212ENST00000514508 GAGE2DQ9UEU5 116 aa7.78□□□□□ -1.16
COPB2-212ENST00000514508 SRRM2Q9UQ35 2752 aaKnown RBP7.78□□□□□ -1.16
COPB2-212ENST00000514508 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
COPB2-212ENST00000514508 TMEM170BQ5T4T1 132 aa7.77□□□□□ -1.17
COPB2-212ENST00000514508 FLG2Q5D862 2391 aaPredicted RBP7.76□□□□□ -1.17
COPB2-212ENST00000514508 NUPR1O60356 82 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST1H2BKO60814 126 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST1H2BJP06899 126 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST1H2BOP23527 126 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST1H2BBP33778 126 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST1H2BDP58876 126 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST1H2BCP62807 126 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST2H2BEQ16778 126 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST1H2BHQ93079 126 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST1H2BNQ99877 126 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HIST1H2BMQ99879 126 aa7.76□□□□□ -1.17
COPB2-212ENST00000514508 HSPB8Q9UJY1 196 aa7.75□□□□□ -1.17
COPB2-212ENST00000514508 S100A1P23297 94 aa7.74□□□□□ -1.17
COPB2-212ENST00000514508 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
COPB2-212ENST00000514508 FAM168BA1KXE4 195 aa7.73□□□□□ -1.17
COPB2-212ENST00000514508 FABP4P15090 132 aa7.73□□□□□ -1.17
COPB2-212ENST00000514508 C9orf129Q5T035 196 aaKnown RBP7.73□□□□□ -1.17
COPB2-212ENST00000514508 SFTA2Q6UW10 78 aa7.73□□□□□ -1.17
COPB2-212ENST00000514508 TMEM223A0PJW6 202 aa7.72□□□□□ -1.17
COPB2-212ENST00000514508 H0Y8G0 127 aa7.72□□□□□ -1.17
COPB2-212ENST00000514508 PRR3P79522 188 aaKnown RBP7.72□□□□□ -1.17
COPB2-212ENST00000514508 ODF1Q14990 250 aa7.72□□□□□ -1.17
COPB2-212ENST00000514508 PHF5AQ7RTV0 110 aaKnown RBP7.72□□□□□ -1.17
COPB2-212ENST00000514508 FAM19A5Q7Z5A7 132 aaPredicted RBP7.72□□□□□ -1.17
COPB2-212ENST00000514508 HNRNPA3P51991 378 aaKnown RBP7.71□□□□□ -1.18
COPB2-212ENST00000514508 XAGE1AQ9HD64 81 aa7.71□□□□□ -1.18
COPB2-212ENST00000514508 MYCBP2O75592 4640 aa7.71□□□□□ -1.18
COPB2-212ENST00000514508 LCE2AQ5TA79 106 aaPredicted RBP7.7□□□□□ -1.18
COPB2-212ENST00000514508 KRTAP7-1Q8IUC3 87 aa7.7□□□□□ -1.18
COPB2-212ENST00000514508 MAP1LC3CQ9BXW4 147 aa7.7□□□□□ -1.18
COPB2-212ENST00000514508 M0QXV9 152 aa7.69□□□□□ -1.18
COPB2-212ENST00000514508 ATP6V1G1O75348 118 aa7.69□□□□□ -1.18
COPB2-212ENST00000514508 PLNP26678 52 aa7.69□□□□□ -1.18
COPB2-212ENST00000514508 COX17Q14061 63 aa7.69□□□□□ -1.18
COPB2-212ENST00000514508 KRTAP29-1A8MX34 341 aaPredicted RBP7.68□□□□□ -1.18
COPB2-212ENST00000514508 COA6Q5JTJ3 125 aaKnown RBP7.68□□□□□ -1.18
COPB2-212ENST00000514508 PSORS1C2Q9UIG4 136 aa7.68□□□□□ -1.18
COPB2-212ENST00000514508 ERG28Q9UKR5 140 aa7.68□□□□□ -1.18
COPB2-212ENST00000514508 DPM2O94777 84 aa7.67□□□□□ -1.18
COPB2-212ENST00000514508 OXTP01178 125 aa7.67□□□□□ -1.18
COPB2-212ENST00000514508 PFN2P35080 140 aa7.67□□□□□ -1.18
COPB2-212ENST00000514508 SERTAD4-AS1Q5TG53 156 aa7.67□□□□□ -1.18
COPB2-212ENST00000514508 ZNF625Q96I27 306 aaPredicted RBP7.67□□□□□ -1.18
COPB2-212ENST00000514508 FAT3Q8TDW7 4589 aa7.66□□□□□ -1.18
COPB2-212ENST00000514508 J3QL48 77 aa7.66□□□□□ -1.18
COPB2-212ENST00000514508 IGKCP01834 107 aa7.66□□□□□ -1.18
COPB2-212ENST00000514508 UBE2BP63146 152 aa7.66□□□□□ -1.18
COPB2-212ENST00000514508 PLA2G2DQ9UNK4 145 aa7.66□□□□□ -1.18
COPB2-212ENST00000514508 C22orf24Q9Y442 160 aa7.66□□□□□ -1.18
COPB2-212ENST00000514508 SYS1-DBNDD2H3BUS1 97 aa7.65□□□□□ -1.18
COPB2-212ENST00000514508 HERVK_113P61574 105 aa7.65□□□□□ -1.18
COPB2-212ENST00000514508 LBHQ53QV2 105 aaPredicted RBP7.65□□□□□ -1.18
COPB2-212ENST00000514508 C1orf137Q5JT78 98 aa7.65□□□□□ -1.18
COPB2-212ENST00000514508 SPINK6Q6UWN8 80 aa7.65□□□□□ -1.18
COPB2-212ENST00000514508 PMCHL2Q9BQD1 86 aa7.65□□□□□ -1.18
COPB2-212ENST00000514508 TP73-AS1Q9UF72 201 aa7.65□□□□□ -1.18
COPB2-212ENST00000514508 LRP1Q07954 4544 aaKnown RBP7.64□□□□□ -1.19
COPB2-212ENST00000514508 HERV-K104P63124 156 aa7.64□□□□□ -1.19
COPB2-212ENST00000514508 SRSF9Q13242 221 aaKnown RBP eCLIP7.64□□□□□ -1.19
COPB2-212ENST00000514508 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
COPB2-212ENST00000514508 LEPROTO15243 131 aa7.63□□□□□ -1.19
COPB2-212ENST00000514508 PET117Q6UWS5 81 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms