RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 KIAA0087Q14695 138 aa6.55□□□□□ -1.36
RNF4-218ENST00000513284 LBHQ53QV2 105 aaPredicted RBP6.55□□□□□ -1.36
RNF4-218ENST00000513284 VCX2Q9H322 139 aa6.55□□□□□ -1.36
RNF4-218ENST00000513284 TOMM7Q9P0U1 55 aa6.55□□□□□ -1.36
RNF4-218ENST00000513284 LOC389332A0A1B0GUA5 103 aa6.54□□□□□ -1.36
RNF4-218ENST00000513284 ADCYAP1P18509 176 aa6.54□□□□□ -1.36
RNF4-218ENST00000513284 C6orf226Q5I0X4 101 aa6.54□□□□□ -1.36
RNF4-218ENST00000513284 C2orf66Q6UXQ4 117 aa6.54□□□□□ -1.36
RNF4-218ENST00000513284 RETNLBQ9BQ08 111 aa6.54□□□□□ -1.36
RNF4-218ENST00000513284 A0A087X002 238 aa6.53□□□□□ -1.36
RNF4-218ENST00000513284 CXCL5P42830 114 aa6.53□□□□□ -1.36
RNF4-218ENST00000513284 HERVK_113P63121 156 aa6.53□□□□□ -1.36
RNF4-218ENST00000513284 C2orf82Q6UX34 121 aa6.53□□□□□ -1.36
RNF4-218ENST00000513284 Q8IZM0 81 aa6.53□□□□□ -1.36
RNF4-218ENST00000513284 Q8N8P6 123 aa6.53□□□□□ -1.36
RNF4-218ENST00000513284 KRTAP4-1Q9BYQ7 146 aa6.53□□□□□ -1.36
RNF4-218ENST00000513284 TMEM218A2RU14 115 aa6.52□□□□□ -1.37
RNF4-218ENST00000513284 ZNF861PO60384 105 aa6.52□□□□□ -1.37
RNF4-218ENST00000513284 UQCC3Q6UW78 93 aa6.52□□□□□ -1.37
RNF4-218ENST00000513284 ALKBH7Q9BT30 221 aaPredicted RBP6.52□□□□□ -1.37
RNF4-218ENST00000513284 CDIP1Q9H305 208 aa6.52□□□□□ -1.37
RNF4-218ENST00000513284 GEMIN7Q9H840 131 aaKnown RBP6.52□□□□□ -1.37
RNF4-218ENST00000513284 NXT2Q9NPJ8 142 aaKnown RBP6.52□□□□□ -1.37
RNF4-218ENST00000513284 LINC01547P58512 204 aaPredicted RBP6.51□□□□□ -1.37
RNF4-218ENST00000513284 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
RNF4-218ENST00000513284 C9orf129Q5T035 196 aaKnown RBP6.51□□□□□ -1.37
RNF4-218ENST00000513284 AMELXQ99217 191 aa6.51□□□□□ -1.37
RNF4-218ENST00000513284 RPL28P46779 137 aaKnown RBP6.5□□□□□ -1.37
RNF4-218ENST00000513284 FAM19A3Q7Z5A8 133 aa6.5□□□□□ -1.37
RNF4-218ENST00000513284 CTDSP1Q9GZU7 261 aa6.5□□□□□ -1.37
RNF4-218ENST00000513284 TP73-AS1Q9UF72 201 aa6.5□□□□□ -1.37
RNF4-218ENST00000513284 C22orf24Q9Y442 160 aa6.5□□□□□ -1.37
RNF4-218ENST00000513284 LINC01549A6NIU2 74 aa6.49□□□□□ -1.37
RNF4-218ENST00000513284 IGIPA6NJ69 53 aa6.49□□□□□ -1.37
RNF4-218ENST00000513284 F8VRH5 84 aa6.49□□□□□ -1.37
RNF4-218ENST00000513284 ZC2HC1BQ5TFG8 222 aa6.49□□□□□ -1.37
RNF4-218ENST00000513284 LINC00173Q6ZV60 143 aa6.49□□□□□ -1.37
RNF4-218ENST00000513284 TIMM17AQ99595 171 aa6.49□□□□□ -1.37
RNF4-218ENST00000513284 SEC11CQ9BY50 192 aa6.49□□□□□ -1.37
RNF4-218ENST00000513284 TRAV9-1A0A075B6T8 112 aa6.48□□□□□ -1.37
RNF4-218ENST00000513284 KIAA1644Q3SXP7 199 aa6.48□□□□□ -1.37
RNF4-218ENST00000513284 MRPL55Q7Z7F7 128 aaKnown RBP6.48□□□□□ -1.37
RNF4-218ENST00000513284 LINC00469Q8N7U9 141 aa6.48□□□□□ -1.37
RNF4-218ENST00000513284 IGLV7-46A0A075B6I9 117 aa6.47□□□□□ -1.37
RNF4-218ENST00000513284 C10orf91Q5T1B1 145 aa6.47□□□□□ -1.37
RNF4-218ENST00000513284 XAGE1AQ9HD64 81 aa6.47□□□□□ -1.37
RNF4-218ENST00000513284 BCE1O60756 84 aa6.46□□□□□ -1.38
RNF4-218ENST00000513284 LCE2CQ5TA81 110 aa6.46□□□□□ -1.38
RNF4-218ENST00000513284 TYMSOSQ8TAI1 123 aa6.46□□□□□ -1.38
RNF4-218ENST00000513284 CDKN2A-AS1Q9UH64 79 aa6.46□□□□□ -1.38
RNF4-218ENST00000513284 CRYGAP11844 174 aa6.45□□□□□ -1.38
RNF4-218ENST00000513284 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
RNF4-218ENST00000513284 PDZD11Q5EBL8 140 aa6.45□□□□□ -1.38
RNF4-218ENST00000513284 ERASQ7Z444 233 aa6.45□□□□□ -1.38
RNF4-218ENST00000513284 COMMD7Q86VX2 200 aa6.45□□□□□ -1.38
RNF4-218ENST00000513284 TOMM6Q96B49 74 aa6.45□□□□□ -1.38
RNF4-218ENST00000513284 GNB1LQ9BYB4 327 aa6.45□□□□□ -1.38
RNF4-218ENST00000513284 ANAPC11Q9NYG5 84 aa6.45□□□□□ -1.38
RNF4-218ENST00000513284 LINC01546A6NGU7 62 aa6.44□□□□□ -1.38
RNF4-218ENST00000513284 NKAPP1Q8N9T2 125 aa6.44□□□□□ -1.38
RNF4-218ENST00000513284 COX7B2Q8TF08 81 aa6.44□□□□□ -1.38
RNF4-218ENST00000513284 SCGB3A1Q96QR1 104 aa6.44□□□□□ -1.38
RNF4-218ENST00000513284 TINCRA0A1B0GVN0 87 aa6.43□□□□□ -1.38
RNF4-218ENST00000513284 S100PP25815 95 aa6.43□□□□□ -1.38
RNF4-218ENST00000513284 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
RNF4-218ENST00000513284 SMIM1B2RUZ4 78 aa6.42□□□□□ -1.38
RNF4-218ENST00000513284 H3BRM9 83 aa6.42□□□□□ -1.38
RNF4-218ENST00000513284 UBE2AP49459 152 aa6.42□□□□□ -1.38
RNF4-218ENST00000513284 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
RNF4-218ENST00000513284 ATP5LO75964 103 aa6.41□□□□□ -1.38
RNF4-218ENST00000513284 RHEBQ15382 184 aa6.41□□□□□ -1.38
RNF4-218ENST00000513284 ASB16-AS1Q495Z4 193 aa6.41□□□□□ -1.38
RNF4-218ENST00000513284 COX19Q49B96 90 aa6.41□□□□□ -1.38
RNF4-218ENST00000513284 LINC00167Q96N53 147 aa6.41□□□□□ -1.38
RNF4-218ENST00000513284 PPDPFQ9H3Y8 114 aa6.41□□□□□ -1.38
RNF4-218ENST00000513284 SMCO4Q9NRQ5 59 aa6.41□□□□□ -1.38
RNF4-218ENST00000513284 IGLV5-45A0A087WSX0 123 aa6.4□□□□□ -1.38
RNF4-218ENST00000513284 RPL37AP8A6NKH3 93 aa6.4□□□□□ -1.38
RNF4-218ENST00000513284 FABP9Q0Z7S8 132 aa6.4□□□□□ -1.38
RNF4-218ENST00000513284 RPS10P5Q9NQ39 176 aa6.4□□□□□ -1.38
RNF4-218ENST00000513284 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
RNF4-218ENST00000513284 GAGE10A6NGK3 116 aa6.39□□□□□ -1.39
RNF4-218ENST00000513284 RAB5BP61020 215 aa6.39□□□□□ -1.39
RNF4-218ENST00000513284 PMVKQ15126 192 aa6.39□□□□□ -1.39
RNF4-218ENST00000513284 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
RNF4-218ENST00000513284 FA2HQ7L5A8 372 aa6.39□□□□□ -1.39
RNF4-218ENST00000513284 CST9LQ9H4G1 147 aa6.39□□□□□ -1.39
RNF4-218ENST00000513284 SPINK8P0C7L1 97 aa6.38□□□□□ -1.39
RNF4-218ENST00000513284 CTAG1AP78358 180 aa6.38□□□□□ -1.39
RNF4-218ENST00000513284 RPL24P83731 157 aaKnown RBP6.38□□□□□ -1.39
RNF4-218ENST00000513284 FAM229BQ4G0N7 80 aa6.38□□□□□ -1.39
RNF4-218ENST00000513284 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
RNF4-218ENST00000513284 IGKV2D-26A0A0A0MRZ7 120 aa6.37□□□□□ -1.39
RNF4-218ENST00000513284 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
RNF4-218ENST00000513284 SFTA2Q6UW10 78 aa6.37□□□□□ -1.39
RNF4-218ENST00000513284 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
RNF4-218ENST00000513284 A0A096LNJ9 63 aa6.36□□□□□ -1.39
RNF4-218ENST00000513284 MT1HP80294 61 aa6.36□□□□□ -1.39
RNF4-218ENST00000513284 IGKV2-28A0A075B6P5 120 aa6.35□□□□□ -1.39
RNF4-218ENST00000513284 IGKV2D-28P01615 120 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms