RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 BIN3Q9NQY0 253 aa5.64□□□□□ -1.51
SNF8-207ENST00000509995 TRBV20OR9-2A0A075B6H5 130 aa5.63□□□□□ -1.51
SNF8-207ENST00000509995 SMKR1H3BMG3 65 aa5.63□□□□□ -1.51
SNF8-207ENST00000509995 CCL20P78556 96 aa5.63□□□□□ -1.51
SNF8-207ENST00000509995 MOBPQ13875 183 aa5.63□□□□□ -1.51
SNF8-207ENST00000509995 NRACQ8N912 160 aa5.63□□□□□ -1.51
SNF8-207ENST00000509995 RAB4AP20338 218 aa5.62□□□□□ -1.51
SNF8-207ENST00000509995 Q6ZN92 141 aa5.62□□□□□ -1.51
SNF8-207ENST00000509995 ALKBH7Q9BT30 221 aaPredicted RBP5.62□□□□□ -1.51
SNF8-207ENST00000509995 RPL37P61927 97 aaKnown RBP5.61□□□□□ -1.51
SNF8-207ENST00000509995 LINC01551Q86U37 167 aa5.61□□□□□ -1.51
SNF8-207ENST00000509995 AMN1Q8IY45 258 aa5.61□□□□□ -1.51
SNF8-207ENST00000509995 MBD3L1Q8WWY6 194 aa5.61□□□□□ -1.51
SNF8-207ENST00000509995 TMEM191AQ9H0A3 160 aa5.61□□□□□ -1.51
SNF8-207ENST00000509995 IGLV9-49A0A0B4J1Y8 123 aa5.6□□□□□ -1.51
SNF8-207ENST00000509995 PPP1R17O96001 155 aa5.6□□□□□ -1.51
SNF8-207ENST00000509995 IGLV6-57P01721 117 aa5.6□□□□□ -1.51
SNF8-207ENST00000509995 LINC00483Q53H64 154 aa5.6□□□□□ -1.51
SNF8-207ENST00000509995 SSBP3-AS1Q7Z2R9 100 aa5.6□□□□□ -1.51
SNF8-207ENST00000509995 PPP1R2P9O14990 202 aa5.59□□□□□ -1.51
SNF8-207ENST00000509995 TCAPO15273 167 aa5.58□□□□□ -1.52
SNF8-207ENST00000509995 CXCL5P42830 114 aa5.58□□□□□ -1.52
SNF8-207ENST00000509995 FAM213BQ8TBF2 198 aa5.58□□□□□ -1.52
SNF8-207ENST00000509995 IGLV4-3A0A075B6K6 122 aa5.57□□□□□ -1.52
SNF8-207ENST00000509995 IFI27P40305 119 aaPredicted RBP5.57□□□□□ -1.52
SNF8-207ENST00000509995 SMCPP49901 116 aaPredicted RBP5.57□□□□□ -1.52
SNF8-207ENST00000509995 KRTAP10-10P60014 251 aa5.57□□□□□ -1.52
SNF8-207ENST00000509995 MANBALQ9NQG1 85 aa5.57□□□□□ -1.52
SNF8-207ENST00000509995 K7EN84 100 aa5.56□□□□□ -1.52
SNF8-207ENST00000509995 VPREB1P12018 145 aa5.56□□□□□ -1.52
SNF8-207ENST00000509995 BORCS7Q96B45 105 aa5.56□□□□□ -1.52
SNF8-207ENST00000509995 TMEM141Q96I45 108 aa5.56□□□□□ -1.52
SNF8-207ENST00000509995 Q5BKY6 102 aa5.55□□□□□ -1.52
SNF8-207ENST00000509995 GNG13Q9P2W3 67 aa5.55□□□□□ -1.52
SNF8-207ENST00000509995 MDN1Q9NU22 5596 aa5.54□□□□□ -1.52
SNF8-207ENST00000509995 A0A1B0GUT8 65 aa5.54□□□□□ -1.52
SNF8-207ENST00000509995 RAB5BP61020 215 aa5.54□□□□□ -1.52
SNF8-207ENST00000509995 GAGE2AQ6NT46 116 aa5.54□□□□□ -1.52
SNF8-207ENST00000509995 TEX43Q6ZNM6 134 aa5.54□□□□□ -1.52
SNF8-207ENST00000509995 FAM231DQ6ZW35 169 aa5.54□□□□□ -1.52
SNF8-207ENST00000509995 AKAP14Q86UN6 197 aa5.54□□□□□ -1.52
SNF8-207ENST00000509995 C20orf78Q9BR46 151 aa5.54□□□□□ -1.52
SNF8-207ENST00000509995 C2orf88Q9BSF0 95 aa5.54□□□□□ -1.52
SNF8-207ENST00000509995 PYGO1Q9Y3Y4 419 aa5.54□□□□□ -1.52
SNF8-207ENST00000509995 A8MWL6 223 aa5.53□□□□□ -1.52
SNF8-207ENST00000509995 H2AFB1P0C5Y9 115 aa5.53□□□□□ -1.52
SNF8-207ENST00000509995 TIMM17AQ99595 171 aa5.53□□□□□ -1.52
SNF8-207ENST00000509995 SMIM2Q9BVW6 85 aa5.53□□□□□ -1.52
SNF8-207ENST00000509995 EIF5A2Q9GZV4 153 aaKnown RBP5.53□□□□□ -1.52
SNF8-207ENST00000509995 FXYD6-FXYD2A0A087WZ82 144 aa5.52□□□□□ -1.53
SNF8-207ENST00000509995 UMAD1C9J7I0 102 aa5.52□□□□□ -1.53
SNF8-207ENST00000509995 GATCO43716 136 aaKnown RBP5.52□□□□□ -1.53
SNF8-207ENST00000509995 PDE6DO43924 150 aa5.52□□□□□ -1.53
SNF8-207ENST00000509995 NPSP0C0P6 89 aa5.52□□□□□ -1.53
SNF8-207ENST00000509995 ZC2HC1BQ5TFG8 222 aa5.52□□□□□ -1.53
SNF8-207ENST00000509995 SMCR5Q8TEV8 140 aa5.52□□□□□ -1.53
SNF8-207ENST00000509995 MED9Q9NWA0 146 aa5.52□□□□□ -1.53
SNF8-207ENST00000509995 KMT2DO14686 5537 aa5.52□□□□□ -1.53
SNF8-207ENST00000509995 TRBV24-1A0A075B6N3 115 aa5.51□□□□□ -1.53
SNF8-207ENST00000509995 HIGD1CA8MV81 97 aa5.51□□□□□ -1.53
SNF8-207ENST00000509995 OCC1Q8TAD7 63 aa5.51□□□□□ -1.53
SNF8-207ENST00000509995 LIMD2Q9BT23 127 aa5.51□□□□□ -1.53
SNF8-207ENST00000509995 CDKN2A-AS1Q9UH64 79 aa5.51□□□□□ -1.53
SNF8-207ENST00000509995 RPL24P83731 157 aaKnown RBP5.5□□□□□ -1.53
SNF8-207ENST00000509995 CT83Q5H943 113 aa5.5□□□□□ -1.53
SNF8-207ENST00000509995 FAM19A3Q7Z5A8 133 aa5.5□□□□□ -1.53
SNF8-207ENST00000509995 Q8NDZ9 215 aa5.5□□□□□ -1.53
SNF8-207ENST00000509995 GIPP09681 153 aaPredicted RBP5.49□□□□□ -1.53
SNF8-207ENST00000509995 HERVK_113P63121 156 aa5.49□□□□□ -1.53
SNF8-207ENST00000509995 MRPL51Q4U2R6 128 aaKnown RBP5.49□□□□□ -1.53
SNF8-207ENST00000509995 AMELXQ99217 191 aa5.49□□□□□ -1.53
SNF8-207ENST00000509995 C20orf202A1L168 122 aa5.48□□□□□ -1.53
SNF8-207ENST00000509995 LGALS3P17931 250 aaKnown RBP5.48□□□□□ -1.53
SNF8-207ENST00000509995 C9orf153Q5TBE3 101 aa5.48□□□□□ -1.53
SNF8-207ENST00000509995 COX7B2Q8TF08 81 aa5.48□□□□□ -1.53
SNF8-207ENST00000509995 LINC00862A6NCI5 91 aa5.47□□□□□ -1.53
SNF8-207ENST00000509995 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
SNF8-207ENST00000509995 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
SNF8-207ENST00000509995 RAB14P61106 215 aa5.47□□□□□ -1.53
SNF8-207ENST00000509995 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
SNF8-207ENST00000509995 SND1-IT1Q9HBX3 110 aa5.47□□□□□ -1.53
SNF8-207ENST00000509995 CKS2P33552 79 aa5.46□□□□□ -1.54
SNF8-207ENST00000509995 FAM104BQ5XKR9 115 aa5.46□□□□□ -1.54
SNF8-207ENST00000509995 C2orf66Q6UXQ4 117 aa5.46□□□□□ -1.54
SNF8-207ENST00000509995 PFN2P35080 140 aa5.45□□□□□ -1.54
SNF8-207ENST00000509995 SEC11AP67812 179 aa5.45□□□□□ -1.54
SNF8-207ENST00000509995 IFITM3Q01628 133 aa5.45□□□□□ -1.54
SNF8-207ENST00000509995 VCX2Q9H322 139 aa5.45□□□□□ -1.54
SNF8-207ENST00000509995 PRYO14603 147 aa5.44□□□□□ -1.54
SNF8-207ENST00000509995 RAB5AP20339 215 aa5.44□□□□□ -1.54
SNF8-207ENST00000509995 SPRR1AP35321 89 aa5.44□□□□□ -1.54
SNF8-207ENST00000509995 RIGQ13278 110 aa5.44□□□□□ -1.54
SNF8-207ENST00000509995 PDZD11Q5EBL8 140 aa5.44□□□□□ -1.54
SNF8-207ENST00000509995 ARPC5O15511 151 aa5.43□□□□□ -1.54
SNF8-207ENST00000509995 ATP5LO75964 103 aa5.43□□□□□ -1.54
SNF8-207ENST00000509995 ERC2-IT1O76042 136 aa5.43□□□□□ -1.54
SNF8-207ENST00000509995 NPYP01303 97 aa5.43□□□□□ -1.54
SNF8-207ENST00000509995 CHTOPQ9Y3Y2 248 aaKnown RBP5.43□□□□□ -1.54
SNF8-207ENST00000509995 ETDCA0A1B0GVM5 59 aa5.42□□□□□ -1.54
SNF8-207ENST00000509995 D6R8Y8 96 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms