RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 KRTAP7-1Q8IUC3 87 aa4.54□□□□□ -1.68
TOPBP1-207ENST00000509162 TIMM17AQ99595 171 aa4.54□□□□□ -1.68
TOPBP1-207ENST00000509162 C1orf196B1AJZ1 125 aa4.53□□□□□ -1.68
TOPBP1-207ENST00000509162 EPM2AB3EWF7 344 aa4.53□□□□□ -1.68
TOPBP1-207ENST00000509162 RAB5AP20339 215 aa4.53□□□□□ -1.68
TOPBP1-207ENST00000509162 NDUFA5Q16718 116 aa4.53□□□□□ -1.68
TOPBP1-207ENST00000509162 ORMDL2Q53FV1 153 aa4.53□□□□□ -1.68
TOPBP1-207ENST00000509162 PDZD11Q5EBL8 140 aa4.53□□□□□ -1.68
TOPBP1-207ENST00000509162 ORAOV1Q8WV07 137 aa4.53□□□□□ -1.68
TOPBP1-207ENST00000509162 CARD19Q96LW7 228 aa4.53□□□□□ -1.68
TOPBP1-207ENST00000509162 C6orf48Q9UBA6 75 aa4.53□□□□□ -1.68
TOPBP1-207ENST00000509162 TRAPPC1Q9Y5R8 145 aa4.53□□□□□ -1.68
TOPBP1-207ENST00000509162 IGLV5-45A0A087WSX0 123 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 A0A087WYN8 130 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 A0A087WZ39 114 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 IGKV2-24A0A0C4DH68 120 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 C5orf52A6NGY3 159 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 COLCA2A8K830 154 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 K7EMI3 77 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 GAGE2BQ13066 116 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 COX19Q49B96 90 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 GAGE2EQ4V326 116 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 GAGE2AQ6NT46 116 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 TEX43Q6ZNM6 134 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 PLAC8Q9NZF1 115 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 GAGE2DQ9UEU5 116 aa4.52□□□□□ -1.69
TOPBP1-207ENST00000509162 SMIM1B2RUZ4 78 aa4.51□□□□□ -1.69
TOPBP1-207ENST00000509162 NUPR1O60356 82 aa4.51□□□□□ -1.69
TOPBP1-207ENST00000509162 SYCNQ0VAF6 134 aa4.51□□□□□ -1.69
TOPBP1-207ENST00000509162 C2orf82Q6UX34 121 aa4.51□□□□□ -1.69
TOPBP1-207ENST00000509162 UNQ6190/PRO20217Q6UXQ8 127 aa4.51□□□□□ -1.69
TOPBP1-207ENST00000509162 ERASQ7Z444 233 aa4.51□□□□□ -1.69
TOPBP1-207ENST00000509162 KRTAP11-1Q8IUC1 163 aa4.51□□□□□ -1.69
TOPBP1-207ENST00000509162 OR10D4PQ8NGN7 298 aa4.51□□□□□ -1.69
TOPBP1-207ENST00000509162 CDKN2A-AS1Q9UH64 79 aa4.51□□□□□ -1.69
TOPBP1-207ENST00000509162 A0A1W2PNN7 141 aa4.5□□□□□ -1.69
TOPBP1-207ENST00000509162 TRGC2P03986 189 aa4.5□□□□□ -1.69
TOPBP1-207ENST00000509162 FA2HQ7L5A8 372 aa4.5□□□□□ -1.69
TOPBP1-207ENST00000509162 C2orf48Q96LS8 159 aa4.5□□□□□ -1.69
TOPBP1-207ENST00000509162 CST9LQ9H4G1 147 aa4.5□□□□□ -1.69
TOPBP1-207ENST00000509162 SMCO4Q9NRQ5 59 aa4.5□□□□□ -1.69
TOPBP1-207ENST00000509162 DMBT1Q9UGM3 2413 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-207ENST00000509162 UBR4Q5T4S7 5183 aa4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 FAM168BA1KXE4 195 aa4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 HBDP02042 147 aa4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 INAFM2P0DMQ5 153 aa4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 IGLC3P0DOY3 106 aa4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 ZNF22P17026 224 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 SMAGPQ0VAQ4 97 aa4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 C9orf116Q5BN46 136 aaPredicted RBP4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 Q6ZRP5 223 aa4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 SCGB3A1Q96QR1 104 aa4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 CAMK2N2Q96S95 79 aa4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 MRPL35Q9NZE8 188 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-207ENST00000509162 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 C11orf86A6NJI1 115 aa4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 APOMO95445 188 aa4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 SPINK8P0C7L1 97 aa4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 LINC00614P0C842 121 aa4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 MAJINQ3KP22 176 aa4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 Q6ZN92 141 aa4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 Q75L30 129 aa4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 LINC01561Q8N1V8 128 aa4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 C2orf88Q9BSF0 95 aa4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 VCX2Q9H322 139 aa4.48□□□□□ -1.69
TOPBP1-207ENST00000509162 IGLV5-39A0A0G2JS06 123 aa4.47□□□□□ -1.69
TOPBP1-207ENST00000509162 TINCRA0A1B0GVN0 87 aa4.47□□□□□ -1.69
TOPBP1-207ENST00000509162 SERF1AO75920 110 aa4.47□□□□□ -1.69
TOPBP1-207ENST00000509162 TLX1NBP0CAT3 122 aa4.47□□□□□ -1.69
TOPBP1-207ENST00000509162 RPL37AP61513 92 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-207ENST00000509162 UBE2V1Q13404 147 aa4.47□□□□□ -1.69
TOPBP1-207ENST00000509162 PMVKQ15126 192 aa4.47□□□□□ -1.69
TOPBP1-207ENST00000509162 C9orf129Q5T035 196 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-207ENST00000509162 FAM19A2Q8N3H0 131 aa4.47□□□□□ -1.69
TOPBP1-207ENST00000509162 STPG4Q8N801 248 aa4.47□□□□□ -1.69
TOPBP1-207ENST00000509162 LOC107984640A0A0U1RRK4 108 aa4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 NDUFA1O15239 70 aa4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 SEC61BP60468 96 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 SNRPEP62304 92 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 HERVK_113P63121 156 aa4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 PRR3P79522 188 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 RPL18AQ02543 176 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 Q8IZM0 81 aa4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 LINC00469Q8N7U9 141 aa4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 Q8NDZ9 215 aa4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 MPLKIPQ8TAP9 179 aa4.46□□□□□ -1.7
TOPBP1-207ENST00000509162 LRP2P98164 4655 aa4.45□□□□□ -1.7
TOPBP1-207ENST00000509162 MT1HL1P0DM35 61 aa4.45□□□□□ -1.7
TOPBP1-207ENST00000509162 PHF5AQ7RTV0 110 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-207ENST00000509162 CHCHD1Q96BP2 118 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-207ENST00000509162 TOMM7Q9P0U1 55 aa4.45□□□□□ -1.7
TOPBP1-207ENST00000509162 HIST1H2BKO60814 126 aa4.44□□□□□ -1.7
TOPBP1-207ENST00000509162 HIST1H2BJP06899 126 aa4.44□□□□□ -1.7
TOPBP1-207ENST00000509162 HIST1H2BOP23527 126 aa4.44□□□□□ -1.7
TOPBP1-207ENST00000509162 HIST1H2BBP33778 126 aa4.44□□□□□ -1.7
TOPBP1-207ENST00000509162 HIST1H2BDP58876 126 aa4.44□□□□□ -1.7
TOPBP1-207ENST00000509162 TSPEAR-AS2P59090 65 aa4.44□□□□□ -1.7
TOPBP1-207ENST00000509162 RAB5BP61020 215 aa4.44□□□□□ -1.7
TOPBP1-207ENST00000509162 HIST1H2BCP62807 126 aa4.44□□□□□ -1.7
TOPBP1-207ENST00000509162 HIST2H2BEQ16778 126 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms