RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 C6orf226Q5I0X4 101 aa11.34□□□□□ -0.59
TRIM60-203ENST00000508504 UNQ6190/PRO20217Q6UXQ8 127 aa11.34□□□□□ -0.59
TRIM60-203ENST00000508504 PRSS2P07478 247 aa11.33□□□□□ -0.6
TRIM60-203ENST00000508504 Q6ZRU5 148 aa11.33□□□□□ -0.6
TRIM60-203ENST00000508504 EREGO14944 169 aa11.33□□□□□ -0.6
TRIM60-203ENST00000508504 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
TRIM60-203ENST00000508504 LRP1BQ9NZR2 4599 aa11.32□□□□□ -0.6
TRIM60-203ENST00000508504 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
TRIM60-203ENST00000508504 E9PLD3 99 aa11.32□□□□□ -0.6
TRIM60-203ENST00000508504 TTTY13Q9BZ97 58 aa11.32□□□□□ -0.6
TRIM60-203ENST00000508504 HERVK_113P61574 105 aa11.31□□□□□ -0.6
TRIM60-203ENST00000508504 CNBPP62633 177 aaKnown RBP11.31□□□□□ -0.6
TRIM60-203ENST00000508504 C2orf48Q96LS8 159 aa11.31□□□□□ -0.6
TRIM60-203ENST00000508504 LEPROTO15243 131 aa11.3□□□□□ -0.6
TRIM60-203ENST00000508504 CKS1BP61024 79 aa11.3□□□□□ -0.6
TRIM60-203ENST00000508504 SYCNQ0VAF6 134 aa11.3□□□□□ -0.6
TRIM60-203ENST00000508504 C9orf116Q5BN46 136 aaPredicted RBP11.3□□□□□ -0.6
TRIM60-203ENST00000508504 J3QQQ9 107 aa11.3□□□□□ -0.6
TRIM60-203ENST00000508504 C6orf48Q9UBA6 75 aa11.3□□□□□ -0.6
TRIM60-203ENST00000508504 IGLV5-52A0A0A0MRZ9 124 aa11.29□□□□□ -0.6
TRIM60-203ENST00000508504 ZNF625Q96I27 306 aaPredicted RBP11.29□□□□□ -0.6
TRIM60-203ENST00000508504 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
TRIM60-203ENST00000508504 NDUFA1O15239 70 aa11.28□□□□□ -0.6
TRIM60-203ENST00000508504 NMUP48645 174 aa11.27□□□□□ -0.61
TRIM60-203ENST00000508504 C9orf163Q8N9P6 203 aa11.27□□□□□ -0.61
TRIM60-203ENST00000508504 PLEKHB2Q96CS7 222 aa11.27□□□□□ -0.61
TRIM60-203ENST00000508504 NDUFA12Q9UI09 145 aa11.27□□□□□ -0.61
TRIM60-203ENST00000508504 PCP2Q8IVA1 136 aa11.26□□□□□ -0.61
TRIM60-203ENST00000508504 PAM16Q9Y3D7 125 aa11.26□□□□□ -0.61
TRIM60-203ENST00000508504 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.25□□□□□ -0.61
TRIM60-203ENST00000508504 LGALS3P17931 250 aaKnown RBP11.25□□□□□ -0.61
TRIM60-203ENST00000508504 PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
TRIM60-203ENST00000508504 TP73-AS1Q9UF72 201 aa11.25□□□□□ -0.61
TRIM60-203ENST00000508504 DNAH8Q96JB1 4490 aa11.24□□□□□ -0.61
TRIM60-203ENST00000508504 CXCL5P42830 114 aa11.24□□□□□ -0.61
TRIM60-203ENST00000508504 HSBP1L1C9JCN9 74 aa11.24□□□□□ -0.61
TRIM60-203ENST00000508504 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
TRIM60-203ENST00000508504 F8WDY8 70 aa11.22□□□□□ -0.61
TRIM60-203ENST00000508504 SDIM1Q6ZPB5 146 aa11.22□□□□□ -0.61
TRIM60-203ENST00000508504 VAMP8Q9BV40 100 aa11.22□□□□□ -0.61
TRIM60-203ENST00000508504 KRTAP10-1P60331 282 aa11.21□□□□□ -0.61
TRIM60-203ENST00000508504 SPATA45Q537H7 98 aa11.21□□□□□ -0.61
TRIM60-203ENST00000508504 ZNF815PA8K554 130 aa11.2□□□□□ -0.62
TRIM60-203ENST00000508504 PFN2P35080 140 aa11.2□□□□□ -0.62
TRIM60-203ENST00000508504 A0A0U1RRA0 63 aa11.2□□□□□ -0.62
TRIM60-203ENST00000508504 MYMXA0A1B0GTQ4 84 aa11.2□□□□□ -0.62
TRIM60-203ENST00000508504 PANO1I0J062 215 aa11.2□□□□□ -0.62
TRIM60-203ENST00000508504 GCSHP23434 173 aa11.2□□□□□ -0.62
TRIM60-203ENST00000508504 RNF151Q2KHN1 245 aa11.2□□□□□ -0.62
TRIM60-203ENST00000508504 Q6ZRP5 223 aa11.2□□□□□ -0.62
TRIM60-203ENST00000508504 CHTF8P0CG12 524 aa11.19□□□□□ -0.62
TRIM60-203ENST00000508504 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
TRIM60-203ENST00000508504 C16orf90A8MZG2 172 aa11.18□□□□□ -0.62
TRIM60-203ENST00000508504 C14orf144Q96I85 54 aa11.18□□□□□ -0.62
TRIM60-203ENST00000508504 APOBP04114 4563 aaKnown RBP11.18□□□□□ -0.62
TRIM60-203ENST00000508504 A0A096LNI7 61 aa11.17□□□□□ -0.62
TRIM60-203ENST00000508504 A0A0J9YXY3 114 aa11.17□□□□□ -0.62
TRIM60-203ENST00000508504 RPL18AQ02543 176 aaKnown RBP11.17□□□□□ -0.62
TRIM60-203ENST00000508504 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
TRIM60-203ENST00000508504 SMIM13P0DJ93 91 aa11.17□□□□□ -0.62
TRIM60-203ENST00000508504 HERV-K104P63124 156 aa11.17□□□□□ -0.62
TRIM60-203ENST00000508504 SFTA2Q6UW10 78 aa11.17□□□□□ -0.62
TRIM60-203ENST00000508504 FAM30AQ9NZY2 134 aa11.17□□□□□ -0.62
TRIM60-203ENST00000508504 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.17□□□□□ -0.62
TRIM60-203ENST00000508504 IGKV2-24A0A0C4DH68 120 aa11.16□□□□□ -0.62
TRIM60-203ENST00000508504 SMIM6P0DI80 62 aa11.16□□□□□ -0.62
TRIM60-203ENST00000508504 GAGE2BQ13066 116 aa11.16□□□□□ -0.62
TRIM60-203ENST00000508504 GAGE2EQ4V326 116 aa11.16□□□□□ -0.62
TRIM60-203ENST00000508504 DAND5Q8N907 189 aa11.16□□□□□ -0.62
TRIM60-203ENST00000508504 GAGE2DQ9UEU5 116 aa11.16□□□□□ -0.62
TRIM60-203ENST00000508504 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.62
TRIM60-203ENST00000508504 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.62
TRIM60-203ENST00000508504 MEIG1Q5JSS6 88 aa11.15□□□□□ -0.62
TRIM60-203ENST00000508504 COX8AP10176 69 aa11.14□□□□□ -0.63
TRIM60-203ENST00000508504 ADAMTSL4-AS1Q5T5F5 129 aa11.14□□□□□ -0.63
TRIM60-203ENST00000508504 XAGE1AQ9HD64 81 aa11.14□□□□□ -0.63
TRIM60-203ENST00000508504 LINC00158P58513 81 aa11.14□□□□□ -0.63
TRIM60-203ENST00000508504 LITAFQ99732 161 aa11.14□□□□□ -0.63
TRIM60-203ENST00000508504 PTTG1IPP53801 180 aa11.13□□□□□ -0.63
TRIM60-203ENST00000508504 BOD1L2Q8IYS8 172 aa11.13□□□□□ -0.63
TRIM60-203ENST00000508504 HAMPP81172 84 aa11.12□□□□□ -0.63
TRIM60-203ENST00000508504 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
TRIM60-203ENST00000508504 S100A12P80511 92 aa11.11□□□□□ -0.63
TRIM60-203ENST00000508504 COX17Q14061 63 aa11.11□□□□□ -0.63
TRIM60-203ENST00000508504 SCGB1D4Q6XE38 83 aa11.11□□□□□ -0.63
TRIM60-203ENST00000508504 MIR7-3HGQ8N6C7 128 aa11.11□□□□□ -0.63
TRIM60-203ENST00000508504 KIAA1109Q2LD37 5005 aa11.11□□□□□ -0.63
TRIM60-203ENST00000508504 EIF4EBP3O60516 100 aaPredicted RBP11.11□□□□□ -0.63
TRIM60-203ENST00000508504 SND1-IT1Q9HBX3 110 aa11.11□□□□□ -0.63
TRIM60-203ENST00000508504 FAM168BA1KXE4 195 aa11.1□□□□□ -0.63
TRIM60-203ENST00000508504 Q6ZSA8 131 aa11.1□□□□□ -0.63
TRIM60-203ENST00000508504 C12orf57Q99622 126 aa11.1□□□□□ -0.63
TRIM60-203ENST00000508504 SPACA4Q8TDM5 124 aa11.09□□□□□ -0.63
TRIM60-203ENST00000508504 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
TRIM60-203ENST00000508504 NPC2P61916 151 aa11.08□□□□□ -0.64
TRIM60-203ENST00000508504 KRTAP7-1Q8IUC3 87 aa11.08□□□□□ -0.64
TRIM60-203ENST00000508504 Q8NDZ9 215 aa11.08□□□□□ -0.64
TRIM60-203ENST00000508504 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
TRIM60-203ENST00000508504 DLEU1O43261 78 aa11.07□□□□□ -0.64
TRIM60-203ENST00000508504 SLC25A34Q6PIV7 304 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms