RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 PET117Q6UWS5 81 aa8.72□□□□□ -1.01
UBE2D3-221ENST00000507845 KRTAP4-12Q9BQ66 201 aa8.72□□□□□ -1.01
UBE2D3-221ENST00000507845 LRP1BQ9NZR2 4599 aa8.71□□□□□ -1.01
UBE2D3-221ENST00000507845 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-221ENST00000507845 DPM2O94777 84 aa8.71□□□□□ -1.02
UBE2D3-221ENST00000507845 GCSHP23434 173 aa8.71□□□□□ -1.02
UBE2D3-221ENST00000507845 PLNP26678 52 aa8.71□□□□□ -1.02
UBE2D3-221ENST00000507845 SYCNQ0VAF6 134 aa8.71□□□□□ -1.02
UBE2D3-221ENST00000507845 LINC01620Q4KN68 170 aa8.71□□□□□ -1.02
UBE2D3-221ENST00000507845 LINC01545Q5VT33 79 aa8.71□□□□□ -1.02
UBE2D3-221ENST00000507845 Q8IZM0 81 aa8.71□□□□□ -1.02
UBE2D3-221ENST00000507845 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.02
UBE2D3-221ENST00000507845 TOMM7Q9P0U1 55 aa8.71□□□□□ -1.02
UBE2D3-221ENST00000507845 IGLV5-39A0A0G2JS06 123 aa8.7□□□□□ -1.02
UBE2D3-221ENST00000507845 TMEM223A0PJW6 202 aa8.7□□□□□ -1.02
UBE2D3-221ENST00000507845 F8WDY8 70 aa8.7□□□□□ -1.02
UBE2D3-221ENST00000507845 PRSS2P07478 247 aa8.7□□□□□ -1.02
UBE2D3-221ENST00000507845 KRTAP10-1P60331 282 aa8.7□□□□□ -1.02
UBE2D3-221ENST00000507845 Q6ZRU5 148 aa8.7□□□□□ -1.02
UBE2D3-221ENST00000507845 CARD19Q96LW7 228 aa8.7□□□□□ -1.02
UBE2D3-221ENST00000507845 CAMK2N2Q96S95 79 aa8.7□□□□□ -1.02
UBE2D3-221ENST00000507845 DNAH8Q96JB1 4490 aa8.7□□□□□ -1.02
UBE2D3-221ENST00000507845 IGKCP01834 107 aa8.69□□□□□ -1.02
UBE2D3-221ENST00000507845 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
UBE2D3-221ENST00000507845 TMA7Q9Y2S6 64 aaKnown RBP8.69□□□□□ -1.02
UBE2D3-221ENST00000507845 NDUFA1O15239 70 aa8.68□□□□□ -1.02
UBE2D3-221ENST00000507845 C6orf226Q5I0X4 101 aa8.68□□□□□ -1.02
UBE2D3-221ENST00000507845 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
UBE2D3-221ENST00000507845 C2orf82Q6UX34 121 aa8.68□□□□□ -1.02
UBE2D3-221ENST00000507845 UNQ6190/PRO20217Q6UXQ8 127 aa8.68□□□□□ -1.02
UBE2D3-221ENST00000507845 CKS1BP61024 79 aa8.66□□□□□ -1.02
UBE2D3-221ENST00000507845 RNF151Q2KHN1 245 aa8.66□□□□□ -1.02
UBE2D3-221ENST00000507845 SDIM1Q6ZPB5 146 aa8.66□□□□□ -1.02
UBE2D3-221ENST00000507845 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
UBE2D3-221ENST00000507845 C20orf202A1L168 122 aa8.65□□□□□ -1.02
UBE2D3-221ENST00000507845 CXCL5P42830 114 aa8.65□□□□□ -1.02
UBE2D3-221ENST00000507845 KRTAP19-1Q8IUB9 90 aa8.65□□□□□ -1.02
UBE2D3-221ENST00000507845 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
UBE2D3-221ENST00000507845 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
UBE2D3-221ENST00000507845 HERVK_113P61574 105 aa8.63□□□□□ -1.03
UBE2D3-221ENST00000507845 Q6ZSA8 131 aa8.63□□□□□ -1.03
UBE2D3-221ENST00000507845 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
UBE2D3-221ENST00000507845 APOBP04114 4563 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-221ENST00000507845 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
UBE2D3-221ENST00000507845 LEPROTO15243 131 aa8.62□□□□□ -1.03
UBE2D3-221ENST00000507845 LCE3BQ5TA77 95 aa8.62□□□□□ -1.03
UBE2D3-221ENST00000507845 AKR1D1P51857 326 aa8.61□□□□□ -1.03
UBE2D3-221ENST00000507845 TSPEAR-AS2P59090 65 aa8.61□□□□□ -1.03
UBE2D3-221ENST00000507845 C9orf116Q5BN46 136 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-221ENST00000507845 ATOH7Q8N100 152 aa8.61□□□□□ -1.03
UBE2D3-221ENST00000507845 STPG4Q8N801 248 aa8.61□□□□□ -1.03
UBE2D3-221ENST00000507845 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
UBE2D3-221ENST00000507845 ZNF625Q96I27 306 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-221ENST00000507845 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
UBE2D3-221ENST00000507845 A0A096LNI7 61 aa8.6□□□□□ -1.03
UBE2D3-221ENST00000507845 E9PLD3 99 aa8.6□□□□□ -1.03
UBE2D3-221ENST00000507845 PANO1I0J062 215 aa8.6□□□□□ -1.03
UBE2D3-221ENST00000507845 TLX1NBP0CAT3 122 aa8.6□□□□□ -1.03
UBE2D3-221ENST00000507845 CHTF8P0CG12 524 aa8.6□□□□□ -1.03
UBE2D3-221ENST00000507845 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-221ENST00000507845 J3QQQ9 107 aa8.59□□□□□ -1.03
UBE2D3-221ENST00000507845 CIRBPQ14011 172 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-221ENST00000507845 SFTA2Q6UW10 78 aa8.59□□□□□ -1.03
UBE2D3-221ENST00000507845 IGKV2-24A0A0C4DH68 120 aa8.58□□□□□ -1.04
UBE2D3-221ENST00000507845 PTTG1IPP53801 180 aa8.58□□□□□ -1.04
UBE2D3-221ENST00000507845 RPL18AQ02543 176 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-221ENST00000507845 Q6ZRP5 223 aa8.58□□□□□ -1.04
UBE2D3-221ENST00000507845 NDUFA12Q9UI09 145 aa8.58□□□□□ -1.04
UBE2D3-221ENST00000507845 NDUFC2-KCTD14E9PQ53 114 aa8.57□□□□□ -1.04
UBE2D3-221ENST00000507845 CDK2AP2O75956 126 aa8.57□□□□□ -1.04
UBE2D3-221ENST00000507845 SCGB1D1O95968 90 aa8.57□□□□□ -1.04
UBE2D3-221ENST00000507845 XGP55808 180 aa8.57□□□□□ -1.04
UBE2D3-221ENST00000507845 GAGE2BQ13066 116 aa8.57□□□□□ -1.04
UBE2D3-221ENST00000507845 SPACA4Q8TDM5 124 aa8.57□□□□□ -1.04
UBE2D3-221ENST00000507845 IGKV2D-26A0A0A0MRZ7 120 aa8.56□□□□□ -1.04
UBE2D3-221ENST00000507845 LGALS3P17931 250 aaKnown RBP8.56□□□□□ -1.04
UBE2D3-221ENST00000507845 HAMPP81172 84 aa8.56□□□□□ -1.04
UBE2D3-221ENST00000507845 ANKRD39Q53RE8 183 aa8.56□□□□□ -1.04
UBE2D3-221ENST00000507845 ERG28Q9UKR5 140 aa8.56□□□□□ -1.04
UBE2D3-221ENST00000507845 RYR1P21817 5038 aa8.56□□□□□ -1.04
UBE2D3-221ENST00000507845 KIAA1109Q2LD37 5005 aa8.55□□□□□ -1.04
UBE2D3-221ENST00000507845 MYMXA0A1B0GTQ4 84 aa8.55□□□□□ -1.04
UBE2D3-221ENST00000507845 NMUP48645 174 aa8.55□□□□□ -1.04
UBE2D3-221ENST00000507845 HERV-K104P63124 156 aa8.55□□□□□ -1.04
UBE2D3-221ENST00000507845 MAJINQ3KP22 176 aa8.55□□□□□ -1.04
UBE2D3-221ENST00000507845 SCXQ7RTU7 201 aa8.55□□□□□ -1.04
UBE2D3-221ENST00000507845 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
UBE2D3-221ENST00000507845 HSPG2P98160 4391 aa8.55□□□□□ -1.04
UBE2D3-221ENST00000507845 PFN2P35080 140 aa8.54□□□□□ -1.04
UBE2D3-221ENST00000507845 GAGE2EQ4V326 116 aa8.54□□□□□ -1.04
UBE2D3-221ENST00000507845 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
UBE2D3-221ENST00000507845 GAGE2DQ9UEU5 116 aa8.54□□□□□ -1.04
UBE2D3-221ENST00000507845 A0A087WYN8 130 aa8.53□□□□□ -1.04
UBE2D3-221ENST00000507845 COX17Q14061 63 aa8.53□□□□□ -1.04
UBE2D3-221ENST00000507845 JOSD1Q15040 202 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-221ENST00000507845 C9orf129Q5T035 196 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-221ENST00000507845 DPH3Q96FX2 82 aa8.52□□□□□ -1.05
UBE2D3-221ENST00000507845 TTTY13Q9BZ97 58 aa8.52□□□□□ -1.05
UBE2D3-221ENST00000507845 PLAC8Q9NZF1 115 aa8.52□□□□□ -1.05
UBE2D3-221ENST00000507845 SMIM13P0DJ93 91 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms