RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 LCN15Q6UWW0 184 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 TMEM14EPQ6UXP3 125 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 TOMM5Q8N4H5 51 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 ZNF431Q8TF32 576 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 ZCCHC13Q8WW36 166 aaKnown RBP1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 LINC00467Q9BRT7 94 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 SLC50A1Q9BRV3 221 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 RNASE7Q9H1E1 156 aaKnown RBP1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 GSKIPQ9P0R6 139 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 TP73-AS1Q9UF72 201 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 SCP2D1Q9UJQ7 156 aa1.46□□□□□ -2.18
TRAPPC11-205ENST00000506426 TRBV10-2A0A0K0K1G8 114 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 DUXBA0A1W2PPF3 345 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 C9orf170A2RU37 121 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 C7orf71A4D174 169 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 FAM24AA6NFZ4 105 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 F6UZH7 168 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 SPINK4O60575 86 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 CFDP00746 253 aaPredicted RBP1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 OR10J4P0C629 311 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 SRIP30626 198 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 CRYBA4P53673 196 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 S100A10P60903 97 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 B2MP61769 119 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 SSBP1Q04837 148 aaKnown RBP1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 NDUFA5Q16718 116 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 TMEM128Q5BJH2 165 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 C10orf113Q5VZT2 155 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 LYPD5Q6UWN5 251 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 MIR17HGQ75NE6 70 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 BPIFA4PQ86YQ2 179 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 Q8N814 137 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 CIB3Q96Q77 187 aaPredicted RBP1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 SCGB3A1Q96QR1 104 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 TIMM21Q9BVV7 248 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 AGPAT4-IT1Q9H0P7 198 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 SLC39A9Q9NUM3 307 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 LY96Q9Y6Y9 160 aa1.45□□□□□ -2.18
TRAPPC11-205ENST00000506426 TRBV19A0A075B6N1 114 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 A0A1B0GVG6 124 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 CCDC160A6NGH7 325 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 H3BNG1 76 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 NDUFB6O95139 128 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 SIX6O95475 246 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 SLC25A5P05141 298 aaKnown RBP1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 GPX1P07203 203 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 SLC25A6P12236 298 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 FGF7P21781 194 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 EVI2AP22794 236 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 FAUP35544 74 aaKnown RBP1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 ZNF80P51504 273 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 FXYD2P54710 66 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 GNG5P63218 68 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 UBE2L3P68036 154 aaKnown RBP1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 LRP2P98164 4655 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 TPRXLQ17RH7 258 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 TMEM78Q5T7P6 136 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 TRIQKQ629K1 86 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 Q8NDZ9 215 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 C2orf50Q96LR7 162 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 HYLS1Q96M11 299 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 NPVFQ9HCQ7 196 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 CACFD1Q9UGQ2 172 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 PRO0255Q9UI72 69 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 PKHD1L1Q86WI1 4243 aa1.44□□□□□ -2.18
TRAPPC11-205ENST00000506426 HMGB3O15347 200 aaKnown RBP1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 TRGC1P0CF51 173 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 SMIM17P0DL12 118 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 IL7P13232 177 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 S100A4P26447 101 aaKnown RBP1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 TMBIM6P55061 237 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 DEFA3P59666 94 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 KRTAP10-4P60372 401 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 RPL19P84098 196 aaKnown RBP1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 DPPA3Q6W0C5 159 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 GOLT1AQ6ZVE7 132 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 C12orf45Q8N5I9 185 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 FAM167A-AS1Q96KT0 104 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 ODF3Q96PU9 254 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 PFDN5Q99471 154 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 SLC25A21Q9BQT8 299 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 TMEM70Q9BUB7 260 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 NPCDR1Q9BY65 106 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 MRPL32Q9BYC8 188 aaKnown RBP1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 SMIM3Q9BZL3 60 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 LYRM2Q9NU23 88 aaPredicted RBP1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 CYSLTR1Q9Y271 337 aa1.43□□□□□ -2.18
TRAPPC11-205ENST00000506426 TNXBP22105 4242 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 TRAV4A0A0B4J268 109 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 NBEAP1P0C6P0 100 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 PDE6HQ13956 83 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 ZNF846Q147U1 533 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 LINC01556Q5JQF7 62 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 CFAP126Q5VTH2 177 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 Q6Q795 121 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 CLPSL2Q6UWE3 100 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 Q6ZSA8 131 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 STX12Q86Y82 276 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 HIST3H2BBQ8N257 126 aa1.42□□□□□ -2.18
TRAPPC11-205ENST00000506426 C10orf126Q8N4M7 172 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms