RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 REG3GQ6UW15 175 aa10.16□□□□□ -0.78
PDLIM7-215ENST00000506161 Q8IZM0 81 aa10.16□□□□□ -0.78
PDLIM7-215ENST00000506161 SCGB3A1Q96QR1 104 aa10.16□□□□□ -0.78
PDLIM7-215ENST00000506161 MRPL18Q9H0U6 180 aaKnown RBP10.16□□□□□ -0.78
PDLIM7-215ENST00000506161 A0A096LNJ9 63 aa10.15□□□□□ -0.78
PDLIM7-215ENST00000506161 SMIM1B2RUZ4 78 aa10.15□□□□□ -0.78
PDLIM7-215ENST00000506161 M0QXV9 152 aa10.15□□□□□ -0.78
PDLIM7-215ENST00000506161 ERASQ7Z444 233 aa10.15□□□□□ -0.78
PDLIM7-215ENST00000506161 RPS10P5Q9NQ39 176 aa10.15□□□□□ -0.78
PDLIM7-215ENST00000506161 HERVK_113P63121 156 aa10.14□□□□□ -0.79
PDLIM7-215ENST00000506161 PACRGQ96M98 296 aaPredicted RBP10.14□□□□□ -0.79
PDLIM7-215ENST00000506161 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
PDLIM7-215ENST00000506161 IGLV5-45A0A087WSX0 123 aa10.13□□□□□ -0.79
PDLIM7-215ENST00000506161 S100PP25815 95 aa10.13□□□□□ -0.79
PDLIM7-215ENST00000506161 PRSS2P07478 247 aa10.12□□□□□ -0.79
PDLIM7-215ENST00000506161 FABP9Q0Z7S8 132 aa10.12□□□□□ -0.79
PDLIM7-215ENST00000506161 C6orf226Q5I0X4 101 aa10.12□□□□□ -0.79
PDLIM7-215ENST00000506161 CST9LQ9H4G1 147 aa10.12□□□□□ -0.79
PDLIM7-215ENST00000506161 GEMIN7Q9H840 131 aaKnown RBP10.12□□□□□ -0.79
PDLIM7-215ENST00000506161 CKS1BP61024 79 aa10.11□□□□□ -0.79
PDLIM7-215ENST00000506161 TINCRA0A1B0GVN0 87 aa10.1□□□□□ -0.79
PDLIM7-215ENST00000506161 KRTAP1-4P0C5Y4 121 aa10.1□□□□□ -0.79
PDLIM7-215ENST00000506161 SPINK8P0C7L1 97 aa10.1□□□□□ -0.79
PDLIM7-215ENST00000506161 RHEBQ15382 184 aa10.1□□□□□ -0.79
PDLIM7-215ENST00000506161 PRR26Q8N8Z3 221 aa10.1□□□□□ -0.79
PDLIM7-215ENST00000506161 PMCHL1Q16048 86 aa10.09□□□□□ -0.79
PDLIM7-215ENST00000506161 PAPPA-AS1Q5QFB9 102 aa10.09□□□□□ -0.79
PDLIM7-215ENST00000506161 C18orf32Q8TCD1 76 aa10.09□□□□□ -0.79
PDLIM7-215ENST00000506161 KRTAP9-2Q9BYQ4 174 aa10.09□□□□□ -0.79
PDLIM7-215ENST00000506161 F8VRH5 84 aa10.08□□□□□ -0.8
PDLIM7-215ENST00000506161 H0Y9J4 135 aa10.08□□□□□ -0.8
PDLIM7-215ENST00000506161 UBE2BP63146 152 aa10.08□□□□□ -0.8
PDLIM7-215ENST00000506161 SEC11AP67812 179 aa10.08□□□□□ -0.8
PDLIM7-215ENST00000506161 FA2HQ7L5A8 372 aa10.08□□□□□ -0.8
PDLIM7-215ENST00000506161 COX7B2Q8TF08 81 aa10.08□□□□□ -0.8
PDLIM7-215ENST00000506161 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
PDLIM7-215ENST00000506161 G0S2P27469 103 aa10.07□□□□□ -0.8
PDLIM7-215ENST00000506161 PMVKQ15126 192 aa10.07□□□□□ -0.8
PDLIM7-215ENST00000506161 COX19Q49B96 90 aa10.06□□□□□ -0.8
PDLIM7-215ENST00000506161 PDZD11Q5EBL8 140 aa10.06□□□□□ -0.8
PDLIM7-215ENST00000506161 APOC3P02656 99 aa10.05□□□□□ -0.8
PDLIM7-215ENST00000506161 DIRC1Q969H9 104 aa10.05□□□□□ -0.8
PDLIM7-215ENST00000506161 YPEL4Q96NS1 127 aa10.05□□□□□ -0.8
PDLIM7-215ENST00000506161 SMCO4Q9NRQ5 59 aa10.05□□□□□ -0.8
PDLIM7-215ENST00000506161 TRAPPC1Q9Y5R8 145 aa10.05□□□□□ -0.8
PDLIM7-215ENST00000506161 IGLC3P0DOY3 106 aa10.03□□□□□ -0.8
PDLIM7-215ENST00000506161 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
PDLIM7-215ENST00000506161 CXCL5P42830 114 aa10.02□□□□□ -0.81
PDLIM7-215ENST00000506161 RAB5BP61020 215 aa10.02□□□□□ -0.81
PDLIM7-215ENST00000506161 IGLV5-39A0A0G2JS06 123 aa10.01□□□□□ -0.81
PDLIM7-215ENST00000506161 SCO1O75880 301 aa10.01□□□□□ -0.81
PDLIM7-215ENST00000506161 LINC00614P0C842 121 aa10.01□□□□□ -0.81
PDLIM7-215ENST00000506161 LPAP08519 4548 aa10□□□□□ -0.81
PDLIM7-215ENST00000506161 LINC00167Q96N53 147 aa10□□□□□ -0.81
PDLIM7-215ENST00000506161 LINC01549A6NIU2 74 aa9.99□□□□□ -0.81
PDLIM7-215ENST00000506161 C11orf86A6NJI1 115 aa9.99□□□□□ -0.81
PDLIM7-215ENST00000506161 RPL37AP8A6NKH3 93 aa9.99□□□□□ -0.81
PDLIM7-215ENST00000506161 HBDP02042 147 aa9.99□□□□□ -0.81
PDLIM7-215ENST00000506161 NDUFA6P56556 154 aa9.99□□□□□ -0.81
PDLIM7-215ENST00000506161 MRPL55Q7Z7F7 128 aaKnown RBP9.99□□□□□ -0.81
PDLIM7-215ENST00000506161 Q8NDZ9 215 aa9.99□□□□□ -0.81
PDLIM7-215ENST00000506161 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
PDLIM7-215ENST00000506161 ZNF861PO60384 105 aa9.98□□□□□ -0.81
PDLIM7-215ENST00000506161 KRTAP9-6A0A140TA67 174 aa9.97□□□□□ -0.81
PDLIM7-215ENST00000506161 TP73-AS1Q9UF72 201 aa9.97□□□□□ -0.81
PDLIM7-215ENST00000506161 SNAPINO95295 136 aa9.96□□□□□ -0.82
PDLIM7-215ENST00000506161 SVBPQ8N300 66 aa9.96□□□□□ -0.82
PDLIM7-215ENST00000506161 IGLV5-37A0A075B6J1 123 aa9.95□□□□□ -0.82
PDLIM7-215ENST00000506161 PFN2P35080 140 aa9.95□□□□□ -0.82
PDLIM7-215ENST00000506161 ZNF625Q96I27 306 aaPredicted RBP9.95□□□□□ -0.82
PDLIM7-215ENST00000506161 IGLV1-50A0A075B6I6 118 aa9.94□□□□□ -0.82
PDLIM7-215ENST00000506161 H3BRM9 83 aa9.94□□□□□ -0.82
PDLIM7-215ENST00000506161 NUPR1O60356 82 aa9.94□□□□□ -0.82
PDLIM7-215ENST00000506161 LBHQ53QV2 105 aaPredicted RBP9.94□□□□□ -0.82
PDLIM7-215ENST00000506161 BAGE3Q86Y29 109 aa9.94□□□□□ -0.82
PDLIM7-215ENST00000506161 CBLN2Q8IUK8 224 aa9.94□□□□□ -0.82
PDLIM7-215ENST00000506161 KRTAP13-1Q8IUC0 172 aa9.93□□□□□ -0.82
PDLIM7-215ENST00000506161 A0A087X002 238 aa9.92□□□□□ -0.82
PDLIM7-215ENST00000506161 BCE1O60756 84 aa9.92□□□□□ -0.82
PDLIM7-215ENST00000506161 ATP5LO75964 103 aa9.91□□□□□ -0.82
PDLIM7-215ENST00000506161 VPREB1P12018 145 aa9.91□□□□□ -0.82
PDLIM7-215ENST00000506161 SND1-IT1Q9HBX3 110 aa9.91□□□□□ -0.82
PDLIM7-215ENST00000506161 ANAPC11Q9NYG5 84 aa9.91□□□□□ -0.82
PDLIM7-215ENST00000506161 ERG28Q9UKR5 140 aa9.91□□□□□ -0.82
PDLIM7-215ENST00000506161 LINC00310P59036 64 aa9.9□□□□□ -0.82
PDLIM7-215ENST00000506161 TMEM170BQ5T4T1 132 aa9.9□□□□□ -0.82
PDLIM7-215ENST00000506161 IGKV2-28A0A075B6P5 120 aa9.89□□□□□ -0.83
PDLIM7-215ENST00000506161 IGKV2D-28P01615 120 aa9.89□□□□□ -0.83
PDLIM7-215ENST00000506161 NDUFA5Q16718 116 aa9.89□□□□□ -0.83
PDLIM7-215ENST00000506161 FAM19A2Q8N3H0 131 aa9.89□□□□□ -0.83
PDLIM7-215ENST00000506161 CHTOPQ9Y3Y2 248 aaKnown RBP9.89□□□□□ -0.83
PDLIM7-215ENST00000506161 TMEM223A0PJW6 202 aa9.87□□□□□ -0.83
PDLIM7-215ENST00000506161 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
PDLIM7-215ENST00000506161 KRTAP13-2Q52LG2 175 aa9.86□□□□□ -0.83
PDLIM7-215ENST00000506161 NKAPP1Q8N9T2 125 aa9.86□□□□□ -0.83
PDLIM7-215ENST00000506161 IFI27L1Q96BM0 104 aa9.86□□□□□ -0.83
PDLIM7-215ENST00000506161 CHCHD1Q96BP2 118 aaKnown RBP9.86□□□□□ -0.83
PDLIM7-215ENST00000506161 A0A0U1RRA0 63 aa9.85□□□□□ -0.83
PDLIM7-215ENST00000506161 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
PDLIM7-215ENST00000506161 PRLHP81277 87 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms