RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 IL36BQ9NZH7 164 aa3.32□□□□□ -1.88
NIPBL-205ENST00000505998 IGHV3OR16-8A0A075B7F1 116 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 IGHV1-24A0A0C4DH33 117 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 F2Z2F3 143 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 ARL14EPLP0DKL9 152 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 PYYP10082 97 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 FGF6P10767 208 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 HLA-DRB4P13762 266 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 CSN1S1P47710 185 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 CMC4P56277 68 aaPredicted RBP3.31□□□□□ -1.88
NIPBL-205ENST00000505998 ORMDL2Q53FV1 153 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 SBSPONQ8IVN8 264 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 AMN1Q8IY45 258 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 C15orf53Q8NAA6 179 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 FAM19A4Q96LR4 140 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 TXNDC17Q9BRA2 123 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 AGPAT4-IT1Q9H0P7 198 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 TMEM167BQ9NRX6 74 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 HLA-DRB4X5D2U9 266 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 COL7A1Q02388 2944 aa3.31□□□□□ -1.88
NIPBL-205ENST00000505998 TRAV12-2A0A075B6T6 113 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 A0A0J9YX75 114 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 TRBV6-1A0A0K0K1D8 114 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 FAM240AA0A1B0GVK7 77 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 A0A1B0GVX0 72 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 A8MWV9 139 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 P01737 135 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 TLX1NBP0CAT3 122 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 GCHFRP30047 84 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 UBE2L3P68036 154 aaKnown RBP3.3□□□□□ -1.88
NIPBL-205ENST00000505998 C12orf74Q32Q52 190 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 LINC01545Q5VT33 79 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 DYNLRB2Q8TF09 96 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 CHCHD1Q96BP2 118 aaKnown RBP3.3□□□□□ -1.88
NIPBL-205ENST00000505998 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 LENEPQ9Y5L5 61 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 SERP1Q9Y6X1 66 aa3.3□□□□□ -1.88
NIPBL-205ENST00000505998 SMIM26A0A096LP01 95 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 IGHV3-49A0A0A0MS15 119 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 LRCOL1A6NCL2 159 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 K7EIL1 84 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 ATOX1O00244 68 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 IGKCP01834 107 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 CD7P09564 240 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 SCGB1C2P0DMR2 95 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 Q6ZRU5 148 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 PRR15Q8IV56 129 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 OTORQ9NRC9 128 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 TP73-AS1Q9UF72 201 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 LY96Q9Y6Y9 160 aa3.29□□□□□ -1.88
NIPBL-205ENST00000505998 DYNC2H1Q8NCM8 4307 aaKnown RBP3.29□□□□□ -1.88
NIPBL-205ENST00000505998 TRAV8-4A0A0B4J246 113 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 H3BMM0 161 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 M0R3E3 92 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 LEPROTL1O95214 131 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 TCRAP04437 139 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 NPC2P61916 151 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 SNRPD3P62318 126 aaKnown RBP3.28□□□□□ -1.88
NIPBL-205ENST00000505998 RPL18AQ02543 176 aaKnown RBP3.28□□□□□ -1.88
NIPBL-205ENST00000505998 LINC00483Q53H64 154 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 FAM19A2Q8N3H0 131 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 TMEM75Q8N9X5 138 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 OR8A1Q8NGG7 326 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 FMC1Q96HJ9 113 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 LINC01600Q96MT4 127 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 C18orf15Q96N68 181 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 LINC00467Q9BRT7 94 aa3.28□□□□□ -1.88
NIPBL-205ENST00000505998 KLK5Q9Y337 293 aaPredicted RBP3.28□□□□□ -1.88
NIPBL-205ENST00000505998 TRAV8-1A0A0A6YYK1 113 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 KNCNA6PVL3 124 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 DEFB131AP59861 70 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 PRR3P79522 188 aaKnown RBP3.27□□□□□ -1.89
NIPBL-205ENST00000505998 GDF5OSQ5U4N7 250 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 Q6ZQT7 251 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 ZFAND2AQ8N6M9 145 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 BRK1Q8WUW1 75 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 TIMM17AQ99595 171 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 TM2D3Q9BRN9 247 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 WFDC10AQ9H1F0 79 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 NHP2Q9NX24 153 aaKnown RBP3.27□□□□□ -1.89
NIPBL-205ENST00000505998 ZNF492Q9P255 531 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 EPDR1Q9UM22 224 aa3.27□□□□□ -1.89
NIPBL-205ENST00000505998 TRBV20OR9-2A0A075B6H5 130 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 TRBV7-6A0A0J9YX20 115 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 PGPA6NDG6 321 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 C9JCJ5 164 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 LTAP01374 205 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 FXYD2P54710 66 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 MRPS36P82909 103 aaKnown RBP3.26□□□□□ -1.89
NIPBL-205ENST00000505998 RNF182Q8N6D2 247 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 IGF2BP2-AS1Q96M15 143 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 DSCR8Q96T75 97 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 B9D2Q9BPU9 175 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 MUC4Q99102 2169 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 CSMD3Q7Z407 3707 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 NBEAL2Q6ZNJ1 2754 aa3.26□□□□□ -1.89
NIPBL-205ENST00000505998 hADV29S1A0JD25 119 aa3.25□□□□□ -1.89
NIPBL-205ENST00000505998 TMEM223A0PJW6 202 aa3.25□□□□□ -1.89
NIPBL-205ENST00000505998 H3BT86 120 aa3.25□□□□□ -1.89
NIPBL-205ENST00000505998 TCL1BO95988 128 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms