RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 NAT8BQ9UHF3 227 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 SMIM27A0A1W2PRY6 76 aa3.46□□□□□ -1.86
GYPB-205ENST00000505583 LINC00862A6NCI5 91 aa3.46□□□□□ -1.86
GYPB-205ENST00000505583 D6R8Y8 96 aa3.46□□□□□ -1.86
GYPB-205ENST00000505583 F8WDY8 70 aa3.46□□□□□ -1.86
GYPB-205ENST00000505583 TSPAN13O95857 204 aa3.46□□□□□ -1.86
GYPB-205ENST00000505583 CKS2P33552 79 aa3.46□□□□□ -1.86
GYPB-205ENST00000505583 UBE2D1P51668 147 aa3.46□□□□□ -1.86
GYPB-205ENST00000505583 SEC61BP60468 96 aaKnown RBP3.46□□□□□ -1.86
GYPB-205ENST00000505583 UBE2BP63146 152 aa3.46□□□□□ -1.86
GYPB-205ENST00000505583 HBBP68871 147 aa3.46□□□□□ -1.86
GYPB-205ENST00000505583 SMAGPQ0VAQ4 97 aa3.46□□□□□ -1.86
GYPB-205ENST00000505583 MRPL54Q6P161 138 aaKnown RBP3.46□□□□□ -1.86
GYPB-205ENST00000505583 IGLV4-3A0A075B6K6 122 aa3.45□□□□□ -1.86
GYPB-205ENST00000505583 A0A087X002 238 aa3.45□□□□□ -1.86
GYPB-205ENST00000505583 A0A1B0GXF2 115 aa3.45□□□□□ -1.86
GYPB-205ENST00000505583 C5orf52A6NGY3 159 aa3.45□□□□□ -1.86
GYPB-205ENST00000505583 NDUFC2-KCTD14E9PQ53 114 aa3.45□□□□□ -1.86
GYPB-205ENST00000505583 ADIRFQ15847 76 aa3.45□□□□□ -1.86
GYPB-205ENST00000505583 LINC00173Q6ZV60 143 aa3.45□□□□□ -1.86
GYPB-205ENST00000505583 LINC00469Q8N7U9 141 aa3.45□□□□□ -1.86
GYPB-205ENST00000505583 TGIF2-C20orf24A0A0A6YYL0 155 aa3.44□□□□□ -1.86
GYPB-205ENST00000505583 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
GYPB-205ENST00000505583 ZNF861PO60384 105 aa3.44□□□□□ -1.86
GYPB-205ENST00000505583 RPL13AP40429 203 aaKnown RBP3.44□□□□□ -1.86
GYPB-205ENST00000505583 XAGE1AQ9HD64 81 aa3.44□□□□□ -1.86
GYPB-205ENST00000505583 ANAPC11Q9NYG5 84 aa3.44□□□□□ -1.86
GYPB-205ENST00000505583 NAT8Q9UHE5 227 aa3.44□□□□□ -1.86
GYPB-205ENST00000505583 C22orf24Q9Y442 160 aa3.44□□□□□ -1.86
GYPB-205ENST00000505583 IFI27P40305 119 aaPredicted RBP3.43□□□□□ -1.86
GYPB-205ENST00000505583 AKAP14Q86UN6 197 aa3.43□□□□□ -1.86
GYPB-205ENST00000505583 TMEM141Q96I45 108 aa3.43□□□□□ -1.86
GYPB-205ENST00000505583 RETNLBQ9BQ08 111 aa3.43□□□□□ -1.86
GYPB-205ENST00000505583 KRTAP9-8Q9BYQ0 159 aa3.43□□□□□ -1.86
GYPB-205ENST00000505583 CARHSP1Q9Y2V2 147 aaKnown RBP3.43□□□□□ -1.86
GYPB-205ENST00000505583 PYGO1Q9Y3Y4 419 aa3.43□□□□□ -1.86
GYPB-205ENST00000505583 LOC389332A0A1B0GUA5 103 aa3.42□□□□□ -1.86
GYPB-205ENST00000505583 A0A1B0GW15 77 aa3.42□□□□□ -1.86
GYPB-205ENST00000505583 PPBPP02775 128 aa3.42□□□□□ -1.86
GYPB-205ENST00000505583 KRTAP13-2Q52LG2 175 aa3.42□□□□□ -1.86
GYPB-205ENST00000505583 TMEM136Q6ZRR5 245 aa3.42□□□□□ -1.86
GYPB-205ENST00000505583 ORMDL3Q8N138 153 aa3.42□□□□□ -1.86
GYPB-205ENST00000505583 PACRGQ96M98 296 aaPredicted RBP3.42□□□□□ -1.86
GYPB-205ENST00000505583 PRELID3AQ96N28 172 aa3.42□□□□□ -1.86
GYPB-205ENST00000505583 AMELXQ99217 191 aa3.42□□□□□ -1.86
GYPB-205ENST00000505583 TOMM7Q9P0U1 55 aa3.42□□□□□ -1.86
GYPB-205ENST00000505583 MUC17Q685J3 4493 aa3.42□□□□□ -1.86
GYPB-205ENST00000505583 FAT4Q6V0I7 4981 aa3.41□□□□□ -1.86
GYPB-205ENST00000505583 IGLV5-39A0A0G2JS06 123 aa3.41□□□□□ -1.86
GYPB-205ENST00000505583 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
GYPB-205ENST00000505583 RPL37AP8A6NKH3 93 aa3.41□□□□□ -1.86
GYPB-205ENST00000505583 F8W036 122 aa3.41□□□□□ -1.86
GYPB-205ENST00000505583 RAB5AP20339 215 aa3.41□□□□□ -1.86
GYPB-205ENST00000505583 C2orf66Q6UXQ4 117 aa3.41□□□□□ -1.86
GYPB-205ENST00000505583 TEX43Q6ZNM6 134 aa3.41□□□□□ -1.86
GYPB-205ENST00000505583 LINC01561Q8N1V8 128 aa3.41□□□□□ -1.86
GYPB-205ENST00000505583 CDKN2A-AS1Q9UH64 79 aa3.41□□□□□ -1.86
GYPB-205ENST00000505583 NUPR1O60356 82 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 BCE1O60756 84 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 S100A8P05109 93 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 CKS1BP61024 79 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 C6orf226Q5I0X4 101 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 Q6ZN92 141 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 FAM19A3Q7Z5A8 133 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 MRPL55Q7Z7F7 128 aaKnown RBP3.4□□□□□ -1.87
GYPB-205ENST00000505583 KRTAP13-1Q8IUC0 172 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 Q8IZM0 81 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 TYMSOSQ8TAI1 123 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 LINC00167Q96N53 147 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 ALKBH7Q9BT30 221 aaPredicted RBP3.4□□□□□ -1.87
GYPB-205ENST00000505583 VCX2Q9H322 139 aa3.4□□□□□ -1.87
GYPB-205ENST00000505583 A0A0U1RQV1 116 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 F8VRH5 84 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 SCO1O75880 301 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 PRSS2P07478 247 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 CRYGAP11844 174 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 RPL28P46779 137 aaKnown RBP3.39□□□□□ -1.87
GYPB-205ENST00000505583 LBHQ53QV2 105 aaPredicted RBP3.39□□□□□ -1.87
GYPB-205ENST00000505583 PAPPA-AS1Q5QFB9 102 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 Q8N8P6 123 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 C2orf88Q9BSF0 95 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 MAP1LC3AQ9H492 121 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 TP73-AS1Q9UF72 201 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 CYSLTR1Q9Y271 337 aa3.39□□□□□ -1.87
GYPB-205ENST00000505583 A0A1B0GVG6 124 aa3.38□□□□□ -1.87
GYPB-205ENST00000505583 PEA15Q15121 130 aa3.38□□□□□ -1.87
GYPB-205ENST00000505583 Q75L30 129 aa3.38□□□□□ -1.87
GYPB-205ENST00000505583 ATP5L2Q7Z4Y8 100 aa3.38□□□□□ -1.87
GYPB-205ENST00000505583 URB1-AS1Q96HZ7 61 aa3.38□□□□□ -1.87
GYPB-205ENST00000505583 SMIM1B2RUZ4 78 aa3.37□□□□□ -1.87
GYPB-205ENST00000505583 ADCYAP1P18509 176 aa3.37□□□□□ -1.87
GYPB-205ENST00000505583 RAB5BP61020 215 aa3.37□□□□□ -1.87
GYPB-205ENST00000505583 HERVK_113P63121 156 aa3.37□□□□□ -1.87
GYPB-205ENST00000505583 PRLHP81277 87 aa3.37□□□□□ -1.87
GYPB-205ENST00000505583 GEMIN7Q9H840 131 aaKnown RBP3.37□□□□□ -1.87
GYPB-205ENST00000505583 LAMTOR2Q9Y2Q5 125 aa3.37□□□□□ -1.87
GYPB-205ENST00000505583 IGLV5-37A0A075B6J1 123 aa3.36□□□□□ -1.87
GYPB-205ENST00000505583 IGKV2-28A0A075B6P5 120 aa3.36□□□□□ -1.87
GYPB-205ENST00000505583 IGKV2D-28P01615 120 aa3.36□□□□□ -1.87
GYPB-205ENST00000505583 PNRC1Q12796 327 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms