RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 HSBP1O75506 76 aa13.07□□□□□ -0.32
DDR1-255ENST00000504927 TLX1NBP0CAT3 122 aa13.07□□□□□ -0.32
DDR1-255ENST00000504927 CKS1BP61024 79 aa13.07□□□□□ -0.32
DDR1-255ENST00000504927 C6orf48Q9UBA6 75 aa13.07□□□□□ -0.32
DDR1-255ENST00000504927 IGLC3P0DOY3 106 aa13.06□□□□□ -0.32
DDR1-255ENST00000504927 RPL18AQ02543 176 aaKnown RBP13.06□□□□□ -0.32
DDR1-255ENST00000504927 FLG2Q5D862 2391 aaPredicted RBP13.06□□□□□ -0.32
DDR1-255ENST00000504927 RPL37AP61513 92 aaKnown RBP13.05□□□□□ -0.32
DDR1-255ENST00000504927 C2orf82Q6UX34 121 aa13.05□□□□□ -0.32
DDR1-255ENST00000504927 SMIM1B2RUZ4 78 aa13.04□□□□□ -0.32
DDR1-255ENST00000504927 C7orf33Q8WU49 177 aa13.04□□□□□ -0.32
DDR1-255ENST00000504927 SCO1O75880 301 aa13.03□□□□□ -0.32
DDR1-255ENST00000504927 CXCL5P42830 114 aa13.03□□□□□ -0.32
DDR1-255ENST00000504927 IFI27L1Q96BM0 104 aa13.03□□□□□ -0.32
DDR1-255ENST00000504927 TRAV12-1A0A0B4J245 112 aa13.01□□□□□ -0.33
DDR1-255ENST00000504927 F8VRH5 84 aa13.01□□□□□ -0.33
DDR1-255ENST00000504927 KRTAP10-4P60372 401 aaPredicted RBP13.01□□□□□ -0.33
DDR1-255ENST00000504927 FAM19A2Q8N3H0 131 aa13.01□□□□□ -0.33
DDR1-255ENST00000504927 COX7B2Q8TF08 81 aa13.01□□□□□ -0.33
DDR1-255ENST00000504927 NDUFC2-KCTD14E9PQ53 114 aa13□□□□□ -0.33
DDR1-255ENST00000504927 SERF1AO75920 110 aa13□□□□□ -0.33
DDR1-255ENST00000504927 SPINK8P0C7L1 97 aa13□□□□□ -0.33
DDR1-255ENST00000504927 Q6ZRP5 223 aa13□□□□□ -0.33
DDR1-255ENST00000504927 CHTOPQ9Y3Y2 248 aaKnown RBP13□□□□□ -0.33
DDR1-255ENST00000504927 HERC1Q15751 4861 aa13□□□□□ -0.33
DDR1-255ENST00000504927 ZNF22P17026 224 aaPredicted RBP12.98□□□□□ -0.33
DDR1-255ENST00000504927 C9orf116Q5BN46 136 aaPredicted RBP12.98□□□□□ -0.33
DDR1-255ENST00000504927 LEPROTL1O95214 131 aa12.97□□□□□ -0.33
DDR1-255ENST00000504927 GAGE2EQ4V326 116 aa12.97□□□□□ -0.33
DDR1-255ENST00000504927 GAGE2DQ9UEU5 116 aa12.97□□□□□ -0.33
DDR1-255ENST00000504927 IGLV5-39A0A0G2JS06 123 aa12.96□□□□□ -0.33
DDR1-255ENST00000504927 A0A1W2PNN7 141 aa12.96□□□□□ -0.33
DDR1-255ENST00000504927 LINC00310P59036 64 aa12.96□□□□□ -0.33
DDR1-255ENST00000504927 C11orf86A6NJI1 115 aa12.95□□□□□ -0.34
DDR1-255ENST00000504927 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
DDR1-255ENST00000504927 HSPB8Q9UJY1 196 aa12.95□□□□□ -0.34
DDR1-255ENST00000504927 DMBT1Q9UGM3 2413 aaPredicted RBP12.94□□□□□ -0.34
DDR1-255ENST00000504927 NUPR1O60356 82 aa12.93□□□□□ -0.34
DDR1-255ENST00000504927 HIST1H2BKO60814 126 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 HIST1H2BJP06899 126 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 S100A1P23297 94 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 HIST1H2BOP23527 126 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 HIST1H2BBP33778 126 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 HIST1H2BDP58876 126 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 HIST1H2BCP62807 126 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 HIST2H2BEQ16778 126 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.92□□□□□ -0.34
DDR1-255ENST00000504927 HIST1H2BHQ93079 126 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 HIST1H2BNQ99877 126 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 HIST1H2BMQ99879 126 aa12.92□□□□□ -0.34
DDR1-255ENST00000504927 PKHD1L1Q86WI1 4243 aa12.91□□□□□ -0.34
DDR1-255ENST00000504927 SFTA2Q6UW10 78 aa12.9□□□□□ -0.34
DDR1-255ENST00000504927 LRP1Q07954 4544 aaKnown RBP12.9□□□□□ -0.34
DDR1-255ENST00000504927 FABP4P15090 132 aa12.89□□□□□ -0.35
DDR1-255ENST00000504927 C9orf129Q5T035 196 aaKnown RBP12.88□□□□□ -0.35
DDR1-255ENST00000504927 TMEM223A0PJW6 202 aa12.87□□□□□ -0.35
DDR1-255ENST00000504927 FAM168BA1KXE4 195 aa12.87□□□□□ -0.35
DDR1-255ENST00000504927 PRR3P79522 188 aaKnown RBP12.87□□□□□ -0.35
DDR1-255ENST00000504927 ODF1Q14990 250 aa12.87□□□□□ -0.35
DDR1-255ENST00000504927 H0Y8G0 127 aa12.86□□□□□ -0.35
DDR1-255ENST00000504927 FAM19A5Q7Z5A7 132 aaPredicted RBP12.86□□□□□ -0.35
DDR1-255ENST00000504927 FAT3Q8TDW7 4589 aa12.85□□□□□ -0.35
DDR1-255ENST00000504927 PHF5AQ7RTV0 110 aaKnown RBP12.85□□□□□ -0.35
DDR1-255ENST00000504927 MAP1LC3CQ9BXW4 147 aa12.85□□□□□ -0.35
DDR1-255ENST00000504927 PLNP26678 52 aa12.84□□□□□ -0.35
DDR1-255ENST00000504927 HNRNPA3P51991 378 aaKnown RBP12.83□□□□□ -0.36
DDR1-255ENST00000504927 COX17Q14061 63 aa12.83□□□□□ -0.36
DDR1-255ENST00000504927 XAGE1AQ9HD64 81 aa12.83□□□□□ -0.36
DDR1-255ENST00000504927 KRTAP29-1A8MX34 341 aaPredicted RBP12.82□□□□□ -0.36
DDR1-255ENST00000504927 KRTAP7-1Q8IUC3 87 aa12.82□□□□□ -0.36
DDR1-255ENST00000504927 M0QXV9 152 aa12.81□□□□□ -0.36
DDR1-255ENST00000504927 OXTP01178 125 aa12.81□□□□□ -0.36
DDR1-255ENST00000504927 COA6Q5JTJ3 125 aaKnown RBP12.81□□□□□ -0.36
DDR1-255ENST00000504927 ATP6V1G1O75348 118 aa12.8□□□□□ -0.36
DDR1-255ENST00000504927 DPM2O94777 84 aa12.8□□□□□ -0.36
DDR1-255ENST00000504927 ZNF625Q96I27 306 aaPredicted RBP12.8□□□□□ -0.36
DDR1-255ENST00000504927 ERG28Q9UKR5 140 aa12.8□□□□□ -0.36
DDR1-255ENST00000504927 PFN2P35080 140 aa12.79□□□□□ -0.36
DDR1-255ENST00000504927 PSORS1C2Q9UIG4 136 aa12.79□□□□□ -0.36
DDR1-255ENST00000504927 IGKCP01834 107 aa12.78□□□□□ -0.36
DDR1-255ENST00000504927 LBHQ53QV2 105 aaPredicted RBP12.78□□□□□ -0.36
DDR1-255ENST00000504927 PLA2G2DQ9UNK4 145 aa12.78□□□□□ -0.36
DDR1-255ENST00000504927 C22orf24Q9Y442 160 aa12.78□□□□□ -0.36
DDR1-255ENST00000504927 J3QL48 77 aa12.77□□□□□ -0.37
DDR1-255ENST00000504927 SERTAD4-AS1Q5TG53 156 aa12.77□□□□□ -0.37
DDR1-255ENST00000504927 SPINK6Q6UWN8 80 aa12.77□□□□□ -0.37
DDR1-255ENST00000504927 TP73-AS1Q9UF72 201 aa12.77□□□□□ -0.37
DDR1-255ENST00000504927 UBE2BP63146 152 aa12.76□□□□□ -0.37
DDR1-255ENST00000504927 SYS1-DBNDD2H3BUS1 97 aa12.75□□□□□ -0.37
DDR1-255ENST00000504927 HERVK_113P61574 105 aa12.75□□□□□ -0.37
DDR1-255ENST00000504927 SRSF9Q13242 221 aaKnown RBP eCLIP12.75□□□□□ -0.37
DDR1-255ENST00000504927 C1orf137Q5JT78 98 aa12.75□□□□□ -0.37
DDR1-255ENST00000504927 LINC00587B1AMM8 73 aa12.74□□□□□ -0.37
DDR1-255ENST00000504927 HERV-K104P63124 156 aa12.74□□□□□ -0.37
DDR1-255ENST00000504927 PLEKHB2Q96CS7 222 aa12.74□□□□□ -0.37
DDR1-255ENST00000504927 PMCHL2Q9BQD1 86 aa12.74□□□□□ -0.37
DDR1-255ENST00000504927 LEPROTO15243 131 aa12.73□□□□□ -0.37
DDR1-255ENST00000504927 MYMXA0A1B0GTQ4 84 aa12.72□□□□□ -0.37
DDR1-255ENST00000504927 PET117Q6UWS5 81 aa12.72□□□□□ -0.37
DDR1-255ENST00000504927 MRPL55Q7Z7F7 128 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms