RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 XAGE1AQ9HD64 81 aa7.89□□□□□ -1.15
DDX41-204ENST00000504807 NPSP0C0P6 89 aa7.88□□□□□ -1.15
DDX41-204ENST00000504807 Q6ZN92 141 aa7.88□□□□□ -1.15
DDX41-204ENST00000504807 Q8IZM0 81 aa7.88□□□□□ -1.15
DDX41-204ENST00000504807 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
DDX41-204ENST00000504807 ALKBH7Q9BT30 221 aaPredicted RBP7.88□□□□□ -1.15
DDX41-204ENST00000504807 LINC01546A6NGU7 62 aa7.87□□□□□ -1.15
DDX41-204ENST00000504807 SMIM1B2RUZ4 78 aa7.87□□□□□ -1.15
DDX41-204ENST00000504807 K7EMI3 77 aa7.87□□□□□ -1.15
DDX41-204ENST00000504807 DIRC1Q969H9 104 aa7.87□□□□□ -1.15
DDX41-204ENST00000504807 PACRGQ96M98 296 aaPredicted RBP7.87□□□□□ -1.15
DDX41-204ENST00000504807 CKS1BP61024 79 aa7.85□□□□□ -1.15
DDX41-204ENST00000504807 HERVK_113P63121 156 aa7.85□□□□□ -1.15
DDX41-204ENST00000504807 UBE2BP63146 152 aa7.85□□□□□ -1.15
DDX41-204ENST00000504807 C6orf226Q5I0X4 101 aa7.85□□□□□ -1.15
DDX41-204ENST00000504807 UQCC3Q6UW78 93 aa7.85□□□□□ -1.15
DDX41-204ENST00000504807 ERASQ7Z444 233 aa7.85□□□□□ -1.15
DDX41-204ENST00000504807 URB1-AS1Q96HZ7 61 aa7.85□□□□□ -1.15
DDX41-204ENST00000504807 C22orf24Q9Y442 160 aa7.85□□□□□ -1.15
DDX41-204ENST00000504807 IGLV5-45A0A087WSX0 123 aa7.84□□□□□ -1.15
DDX41-204ENST00000504807 A0A096LNJ9 63 aa7.84□□□□□ -1.15
DDX41-204ENST00000504807 PRSS2P07478 247 aa7.84□□□□□ -1.15
DDX41-204ENST00000504807 SCGB3A1Q96QR1 104 aa7.84□□□□□ -1.15
DDX41-204ENST00000504807 TRAV9-1A0A075B6T8 112 aa7.83□□□□□ -1.16
DDX41-204ENST00000504807 F8VRH5 84 aa7.83□□□□□ -1.16
DDX41-204ENST00000504807 SEC11CQ9BY50 192 aa7.83□□□□□ -1.16
DDX41-204ENST00000504807 GNB1LQ9BYB4 327 aa7.83□□□□□ -1.16
DDX41-204ENST00000504807 CST9LQ9H4G1 147 aa7.83□□□□□ -1.16
DDX41-204ENST00000504807 GEMIN7Q9H840 131 aaKnown RBP7.83□□□□□ -1.16
DDX41-204ENST00000504807 TINCRA0A1B0GVN0 87 aa7.82□□□□□ -1.16
DDX41-204ENST00000504807 SPINK8P0C7L1 97 aa7.82□□□□□ -1.16
DDX41-204ENST00000504807 C10orf91Q5T1B1 145 aa7.82□□□□□ -1.16
DDX41-204ENST00000504807 COMMD7Q86VX2 200 aa7.82□□□□□ -1.16
DDX41-204ENST00000504807 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
DDX41-204ENST00000504807 LCE2DQ5TA82 110 aaPredicted RBP7.81□□□□□ -1.16
DDX41-204ENST00000504807 COX7B2Q8TF08 81 aa7.81□□□□□ -1.16
DDX41-204ENST00000504807 SCO1O75880 301 aa7.8□□□□□ -1.16
DDX41-204ENST00000504807 IGLV1-50A0A075B6I6 118 aa7.79□□□□□ -1.16
DDX41-204ENST00000504807 RPL37AP8A6NKH3 93 aa7.79□□□□□ -1.16
DDX41-204ENST00000504807 ZNF861PO60384 105 aa7.79□□□□□ -1.16
DDX41-204ENST00000504807 SEC11AP67812 179 aa7.79□□□□□ -1.16
DDX41-204ENST00000504807 PDZD11Q5EBL8 140 aa7.79□□□□□ -1.16
DDX41-204ENST00000504807 PAPPA-AS1Q5QFB9 102 aa7.79□□□□□ -1.16
DDX41-204ENST00000504807 LINC00167Q96N53 147 aa7.79□□□□□ -1.16
DDX41-204ENST00000504807 CARHSP1Q9Y2V2 147 aaKnown RBP7.79□□□□□ -1.16
DDX41-204ENST00000504807 A0A087X002 238 aa7.78□□□□□ -1.16
DDX41-204ENST00000504807 GAGE10A6NGK3 116 aa7.78□□□□□ -1.16
DDX41-204ENST00000504807 RAB5BP61020 215 aa7.78□□□□□ -1.16
DDX41-204ENST00000504807 FABP9Q0Z7S8 132 aa7.78□□□□□ -1.16
DDX41-204ENST00000504807 PMVKQ15126 192 aa7.78□□□□□ -1.16
DDX41-204ENST00000504807 PMCHL1Q16048 86 aa7.78□□□□□ -1.16
DDX41-204ENST00000504807 MRPL55Q7Z7F7 128 aaKnown RBP7.78□□□□□ -1.16
DDX41-204ENST00000504807 Q8NDZ9 215 aa7.78□□□□□ -1.16
DDX41-204ENST00000504807 S100PP25815 95 aa7.77□□□□□ -1.17
DDX41-204ENST00000504807 PRR4Q16378 134 aa7.77□□□□□ -1.17
DDX41-204ENST00000504807 RPS10P5Q9NQ39 176 aa7.77□□□□□ -1.17
DDX41-204ENST00000504807 IGLC3P0DOY3 106 aa7.76□□□□□ -1.17
DDX41-204ENST00000504807 G0S2P27469 103 aa7.76□□□□□ -1.17
DDX41-204ENST00000504807 CXCL5P42830 114 aa7.76□□□□□ -1.17
DDX41-204ENST00000504807 FA2HQ7L5A8 372 aa7.76□□□□□ -1.17
DDX41-204ENST00000504807 KRTAP13-1Q8IUC0 172 aa7.76□□□□□ -1.17
DDX41-204ENST00000504807 C18orf32Q8TCD1 76 aa7.76□□□□□ -1.17
DDX41-204ENST00000504807 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
DDX41-204ENST00000504807 TP73-AS1Q9UF72 201 aa7.76□□□□□ -1.17
DDX41-204ENST00000504807 IGLV5-39A0A0G2JS06 123 aa7.75□□□□□ -1.17
DDX41-204ENST00000504807 NUPR1O60356 82 aa7.75□□□□□ -1.17
DDX41-204ENST00000504807 BCE1O60756 84 aa7.75□□□□□ -1.17
DDX41-204ENST00000504807 ZNF22P17026 224 aaPredicted RBP7.75□□□□□ -1.17
DDX41-204ENST00000504807 IGLV5-37A0A075B6J1 123 aa7.74□□□□□ -1.17
DDX41-204ENST00000504807 RHEBQ15382 184 aa7.74□□□□□ -1.17
DDX41-204ENST00000504807 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
DDX41-204ENST00000504807 C11orf86A6NJI1 115 aa7.72□□□□□ -1.17
DDX41-204ENST00000504807 PFN2P35080 140 aa7.72□□□□□ -1.17
DDX41-204ENST00000504807 KRTAP13-2Q52LG2 175 aa7.72□□□□□ -1.17
DDX41-204ENST00000504807 YPEL4Q96NS1 127 aa7.72□□□□□ -1.17
DDX41-204ENST00000504807 SMCO4Q9NRQ5 59 aa7.72□□□□□ -1.17
DDX41-204ENST00000504807 IGKV2-28A0A075B6P5 120 aa7.71□□□□□ -1.18
DDX41-204ENST00000504807 IGKV2D-28P01615 120 aa7.71□□□□□ -1.18
DDX41-204ENST00000504807 LINC00614P0C842 121 aa7.71□□□□□ -1.18
DDX41-204ENST00000504807 VPREB1P12018 145 aa7.71□□□□□ -1.18
DDX41-204ENST00000504807 NDUFA6P56556 154 aa7.71□□□□□ -1.18
DDX41-204ENST00000504807 COX19Q49B96 90 aa7.71□□□□□ -1.18
DDX41-204ENST00000504807 ZNF625Q96I27 306 aaPredicted RBP7.71□□□□□ -1.18
DDX41-204ENST00000504807 TRAPPC1Q9Y5R8 145 aa7.71□□□□□ -1.18
DDX41-204ENST00000504807 TSPAN13O95857 204 aa7.7□□□□□ -1.18
DDX41-204ENST00000504807 SND1-IT1Q9HBX3 110 aa7.7□□□□□ -1.18
DDX41-204ENST00000504807 LINC01549A6NIU2 74 aa7.69□□□□□ -1.18
DDX41-204ENST00000504807 TMEM238C9JI98 176 aa7.69□□□□□ -1.18
DDX41-204ENST00000504807 HBDP02042 147 aa7.69□□□□□ -1.18
DDX41-204ENST00000504807 RPL13AP40429 203 aaKnown RBP7.69□□□□□ -1.18
DDX41-204ENST00000504807 RPL28P46779 137 aaKnown RBP7.69□□□□□ -1.18
DDX41-204ENST00000504807 H3BRM9 83 aa7.68□□□□□ -1.18
DDX41-204ENST00000504807 ATP5LO75964 103 aa7.68□□□□□ -1.18
DDX41-204ENST00000504807 ERG28Q9UKR5 140 aa7.68□□□□□ -1.18
DDX41-204ENST00000504807 APOC3P02656 99 aa7.67□□□□□ -1.18
DDX41-204ENST00000504807 PRLHP81277 87 aa7.67□□□□□ -1.18
DDX41-204ENST00000504807 BAGE3Q86Y29 109 aa7.67□□□□□ -1.18
DDX41-204ENST00000504807 M0R378 163 aa7.66□□□□□ -1.18
DDX41-204ENST00000504807 NKAPP1Q8N9T2 125 aa7.66□□□□□ -1.18
DDX41-204ENST00000504807 TMEM126AQ9H061 195 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms