RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 NOTCH3Q9UM47 2321 aa4.3□□□□□ -1.72
LINC02397-201ENST00000504409 TECTAO75443 2155 aa4.3□□□□□ -1.72
LINC02397-201ENST00000504409 WNK1Q9H4A3 2382 aa4.3□□□□□ -1.72
LINC02397-201ENST00000504409 Q6ZTI0 123 aa4.3□□□□□ -1.72
LINC02397-201ENST00000504409 IGHV4-61A0A0C4DH41 118 aa4.3□□□□□ -1.72
LINC02397-201ENST00000504409 Q9UF83 564 aa4.3□□□□□ -1.72
LINC02397-201ENST00000504409 C11orf21Q9P2W6 132 aa4.3□□□□□ -1.72
LINC02397-201ENST00000504409 PTPRQQ9UMZ3 2332 aa4.3□□□□□ -1.72
LINC02397-201ENST00000504409 C22orf34Q6ZV56 151 aa4.29□□□□□ -1.72
LINC02397-201ENST00000504409 Q5XG85 94 aa4.29□□□□□ -1.72
LINC02397-201ENST00000504409 CEMP1Q6PRD7 247 aaPredicted RBP4.29□□□□□ -1.72
LINC02397-201ENST00000504409 MUC4Q99102 2169 aa4.29□□□□□ -1.72
LINC02397-201ENST00000504409 C6orf48Q9UBA6 75 aa4.29□□□□□ -1.72
LINC02397-201ENST00000504409 PLA2G2CQ5R387 149 aa4.29□□□□□ -1.72
LINC02397-201ENST00000504409 A8MUN3 132 aa4.29□□□□□ -1.72
LINC02397-201ENST00000504409 Q6ZRP5 223 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 SMCR5Q8TEV8 140 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 KCNQ1DNQ9H478 68 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 A8MWP4 228 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 IGHV4-30-2A0A087WSY4 118 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 SLPIP03973 132 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 DMAC1Q96GE9 116 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 TFF2Q03403 129 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 UNQ9165/PRO28630Q6UXU0 137 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 FAM229AH3BQW9 127 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 C11orf71Q6IPW1 123 aa4.28□□□□□ -1.72
LINC02397-201ENST00000504409 NCOR1O75376 2440 aa4.28□□□□□ -1.73
LINC02397-201ENST00000504409 LINC00315P59091 139 aa4.27□□□□□ -1.73
LINC02397-201ENST00000504409 HTN3P15516 51 aa4.27□□□□□ -1.73
LINC02397-201ENST00000504409 PATE3B3GLJ2 98 aa4.27□□□□□ -1.73
LINC02397-201ENST00000504409 SMIM29Q86T20 159 aa4.27□□□□□ -1.73
LINC02397-201ENST00000504409 PLA2G2DQ9UNK4 145 aa4.27□□□□□ -1.73
LINC02397-201ENST00000504409 LINC01554Q52M75 96 aa4.27□□□□□ -1.73
LINC02397-201ENST00000504409 ADORA2A-AS1P86434 159 aa4.27□□□□□ -1.73
LINC02397-201ENST00000504409 KIAA0087Q14695 138 aa4.27□□□□□ -1.73
LINC02397-201ENST00000504409 ATP1A1-AS1Q5TC04 95 aa4.26□□□□□ -1.73
LINC02397-201ENST00000504409 ZNF843Q8N446 348 aa4.26□□□□□ -1.73
LINC02397-201ENST00000504409 COA5Q86WW8 74 aa4.26□□□□□ -1.73
LINC02397-201ENST00000504409 LYNX1P0DP58 116 aa4.26□□□□□ -1.73
LINC02397-201ENST00000504409 Q6ZRX8 168 aa4.25□□□□□ -1.73
LINC02397-201ENST00000504409 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
LINC02397-201ENST00000504409 SORL1Q92673 2214 aa4.25□□□□□ -1.73
LINC02397-201ENST00000504409 CYSRT1A8MQ03 144 aa4.25□□□□□ -1.73
LINC02397-201ENST00000504409 PRR9Q5T870 116 aa4.25□□□□□ -1.73
LINC02397-201ENST00000504409 A8MTW9 85 aa4.25□□□□□ -1.73
LINC02397-201ENST00000504409 KLK12Q9UKR0 248 aa4.25□□□□□ -1.73
LINC02397-201ENST00000504409 BRD3OSQ6XYD6 125 aa4.25□□□□□ -1.73
LINC02397-201ENST00000504409 ZDBF2Q9HCK1 2354 aa4.24□□□□□ -1.73
LINC02397-201ENST00000504409 FAM104AQ969W3 186 aa4.24□□□□□ -1.73
LINC02397-201ENST00000504409 WFDC13Q8IUB5 93 aa4.24□□□□□ -1.73
LINC02397-201ENST00000504409 Q6YL49 198 aa4.24□□□□□ -1.73
LINC02397-201ENST00000504409 F8W735 103 aaPredicted RBP4.24□□□□□ -1.73
LINC02397-201ENST00000504409 OCR1Q9BZK8 76 aa4.24□□□□□ -1.73
LINC02397-201ENST00000504409 CNOT1A5YKK6 2376 aaKnown RBP4.23□□□□□ -1.73
LINC02397-201ENST00000504409 EPM2AB3EWF7 344 aa4.23□□□□□ -1.73
LINC02397-201ENST00000504409 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.23□□□□□ -1.73
LINC02397-201ENST00000504409 RNF223E7ERA6 249 aa4.23□□□□□ -1.73
LINC02397-201ENST00000504409 C1orf229Q6ZS94 237 aaPredicted RBP4.23□□□□□ -1.73
LINC02397-201ENST00000504409 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
LINC02397-201ENST00000504409 LYNX1G3V0Z9 82 aa4.22□□□□□ -1.73
LINC02397-201ENST00000504409 C22orf24Q9Y442 160 aa4.22□□□□□ -1.73
LINC02397-201ENST00000504409 IGLV4-60A0A075B6I1 120 aa4.22□□□□□ -1.73
LINC02397-201ENST00000504409 C7orf33Q8WU49 177 aa4.22□□□□□ -1.73
LINC02397-201ENST00000504409 RUSC1-AS1Q66K80 236 aa4.22□□□□□ -1.73
LINC02397-201ENST00000504409 IGLV10-54A0A075B6I4 117 aa4.21□□□□□ -1.73
LINC02397-201ENST00000504409 CLPSL2Q6UWE3 100 aa4.21□□□□□ -1.74
LINC02397-201ENST00000504409 IGLV5-48A0A075B6I7 105 aa4.21□□□□□ -1.74
LINC02397-201ENST00000504409 COX6A2Q02221 97 aa4.21□□□□□ -1.74
LINC02397-201ENST00000504409 FAM218AQ96MZ4 157 aa4.21□□□□□ -1.74
LINC02397-201ENST00000504409 IGKV2-28A0A075B6P5 120 aa4.21□□□□□ -1.74
LINC02397-201ENST00000504409 IGKV2D-28P01615 120 aa4.21□□□□□ -1.74
LINC02397-201ENST00000504409 SLURP1P55000 103 aa4.21□□□□□ -1.74
LINC02397-201ENST00000504409 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.74
LINC02397-201ENST00000504409 IGLV7-46A0A075B6I9 117 aa4.2□□□□□ -1.74
LINC02397-201ENST00000504409 TNP2Q05952 138 aa4.2□□□□□ -1.74
LINC02397-201ENST00000504409 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
LINC02397-201ENST00000504409 LMO4P61968 165 aa4.2□□□□□ -1.74
LINC02397-201ENST00000504409 GAS8-AS1O95177 125 aa4.2□□□□□ -1.74
LINC02397-201ENST00000504409 MED13LQ71F56 2210 aa4.19□□□□□ -1.74
LINC02397-201ENST00000504409 GRNP28799 593 aaKnown RBP4.19□□□□□ -1.74
LINC02397-201ENST00000504409 DEFB113Q30KQ7 82 aa4.19□□□□□ -1.74
LINC02397-201ENST00000504409 PRB3Q04118 309 aaPredicted RBP4.19□□□□□ -1.74
LINC02397-201ENST00000504409 TLX1NBP0CAT3 122 aa4.18□□□□□ -1.74
LINC02397-201ENST00000504409 SPRR4Q96PI1 79 aa4.18□□□□□ -1.74
LINC02397-201ENST00000504409 LINC00588Q9Y4M8 146 aa4.18□□□□□ -1.74
LINC02397-201ENST00000504409 EP300Q09472 2414 aaPredicted RBP4.18□□□□□ -1.74
LINC02397-201ENST00000504409 LINC00528Q8N1L1 170 aa4.17□□□□□ -1.74
LINC02397-201ENST00000504409 CHTF8P0CG12 524 aa4.17□□□□□ -1.74
LINC02397-201ENST00000504409 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
LINC02397-201ENST00000504409 LINC01556Q5JQF7 62 aa4.16□□□□□ -1.74
LINC02397-201ENST00000504409 A0A087WSZ3 146 aa4.16□□□□□ -1.74
LINC02397-201ENST00000504409 C16orf95Q9H693 158 aa4.16□□□□□ -1.74
LINC02397-201ENST00000504409 PLA2G2AP14555 144 aa4.16□□□□□ -1.74
LINC02397-201ENST00000504409 NBASA2RRP1 2371 aa4.16□□□□□ -1.74
LINC02397-201ENST00000504409 C11orf45Q8TAV5 145 aa4.16□□□□□ -1.74
LINC02397-201ENST00000504409 IGLV5-37A0A075B6J1 123 aa4.16□□□□□ -1.74
LINC02397-201ENST00000504409 DEFB104AQ8WTQ1 72 aa4.16□□□□□ -1.74
LINC02397-201ENST00000504409 IGLV1-51P01701 117 aa4.15□□□□□ -1.74
LINC02397-201ENST00000504409 FP248Q71RG6 208 aaPredicted RBP4.15□□□□□ -1.75
LINC02397-201ENST00000504409 PRB4P10163 310 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms