RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 OBSCN-AS1Q96MR7 158 aa6.86□□□□□ -1.31
PDLIM5-207ENST00000503974 ZNF73O43830 326 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-207ENST00000503974 DNHD1Q96M86 4753 aa6.85□□□□□ -1.31
PDLIM5-207ENST00000503974 IGHV3-35A0A0C4DH35 117 aa6.85□□□□□ -1.31
PDLIM5-207ENST00000503974 Q6ZVQ6 151 aa6.85□□□□□ -1.31
PDLIM5-207ENST00000503974 TIMM17AQ99595 171 aa6.85□□□□□ -1.31
PDLIM5-207ENST00000503974 WNK1Q9H4A3 2382 aa6.84□□□□□ -1.31
PDLIM5-207ENST00000503974 A0A087WWL8 130 aa6.84□□□□□ -1.31
PDLIM5-207ENST00000503974 TMEM256-PLSCR3K7ERE1 68 aa6.84□□□□□ -1.31
PDLIM5-207ENST00000503974 PHF5AQ7RTV0 110 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-207ENST00000503974 ZNF80P51504 273 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-207ENST00000503974 ZNF876PQ49A33 203 aa6.83□□□□□ -1.32
PDLIM5-207ENST00000503974 TRRAPQ9Y4A5 3859 aa6.83□□□□□ -1.32
PDLIM5-207ENST00000503974 MIAQ16674 131 aa6.83□□□□□ -1.32
PDLIM5-207ENST00000503974 VWFP04275 2813 aa6.82□□□□□ -1.32
PDLIM5-207ENST00000503974 LYRM9A8MSI8 78 aa6.82□□□□□ -1.32
PDLIM5-207ENST00000503974 SUMO2P61956 95 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-207ENST00000503974 TMEM141Q96I45 108 aa6.82□□□□□ -1.32
PDLIM5-207ENST00000503974 IGHV7-4-1A0A0J9YVY3 117 aa6.81□□□□□ -1.32
PDLIM5-207ENST00000503974 C14orf132Q9NPU4 83 aa6.81□□□□□ -1.32
PDLIM5-207ENST00000503974 IGHV3OR16-8A0A075B7F1 116 aa6.81□□□□□ -1.32
PDLIM5-207ENST00000503974 LYZP61626 148 aa6.81□□□□□ -1.32
PDLIM5-207ENST00000503974 UBE2BP63146 152 aa6.81□□□□□ -1.32
PDLIM5-207ENST00000503974 C9orf66Q5T8R8 295 aa6.81□□□□□ -1.32
PDLIM5-207ENST00000503974 SERTAD4-AS1Q5TG53 156 aa6.81□□□□□ -1.32
PDLIM5-207ENST00000503974 ENHOQ6UWT2 76 aa6.81□□□□□ -1.32
PDLIM5-207ENST00000503974 UBE2L6O14933 153 aa6.8□□□□□ -1.32
PDLIM5-207ENST00000503974 IGLV1-51P01701 117 aa6.8□□□□□ -1.32
PDLIM5-207ENST00000503974 IGHV4-4A0A075B6R2 117 aa6.8□□□□□ -1.32
PDLIM5-207ENST00000503974 H3BRN7 92 aa6.8□□□□□ -1.32
PDLIM5-207ENST00000503974 Q6ZRP5 223 aa6.8□□□□□ -1.32
PDLIM5-207ENST00000503974 RHPN1-AS1Q9BWJ2 59 aa6.8□□□□□ -1.32
PDLIM5-207ENST00000503974 PRB4P10163 310 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-207ENST00000503974 Q6ZTC4 211 aa6.79□□□□□ -1.32
PDLIM5-207ENST00000503974 PHLDA3Q9Y5J5 127 aa6.79□□□□□ -1.32
PDLIM5-207ENST00000503974 DEFB114Q30KQ6 69 aa6.78□□□□□ -1.32
PDLIM5-207ENST00000503974 C9orf129Q5T035 196 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-207ENST00000503974 DYNLRB2Q8TF09 96 aa6.78□□□□□ -1.32
PDLIM5-207ENST00000503974 FAM218AQ96MZ4 157 aa6.78□□□□□ -1.32
PDLIM5-207ENST00000503974 TRBV7-4A0A0J9YYF1 115 aa6.78□□□□□ -1.32
PDLIM5-207ENST00000503974 EGFEM1PQ0D2K5 195 aa6.78□□□□□ -1.32
PDLIM5-207ENST00000503974 LCA10Q71F78 164 aa6.78□□□□□ -1.32
PDLIM5-207ENST00000503974 CMYA5Q8N3K9 4069 aa6.78□□□□□ -1.32
PDLIM5-207ENST00000503974 IGHV3-49A0A0A0MS15 119 aa6.77□□□□□ -1.33
PDLIM5-207ENST00000503974 A8MUN3 132 aa6.77□□□□□ -1.33
PDLIM5-207ENST00000503974 SOCS3O14543 225 aa6.77□□□□□ -1.33
PDLIM5-207ENST00000503974 KPRPQ5T749 579 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-207ENST00000503974 IGHV3OR16-13A0A075B7E8 117 aa6.77□□□□□ -1.33
PDLIM5-207ENST00000503974 IGHV3-74A0A0B4J1X5 117 aa6.77□□□□□ -1.33
PDLIM5-207ENST00000503974 TRAV10A0A0B4J240 114 aa6.77□□□□□ -1.33
PDLIM5-207ENST00000503974 SYCNQ0VAF6 134 aa6.77□□□□□ -1.33
PDLIM5-207ENST00000503974 OPRPNQ99935 248 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-207ENST00000503974 PKD1L1Q8TDX9 2849 aa6.76□□□□□ -1.33
PDLIM5-207ENST00000503974 IGHV3-66A0A0C4DH42 116 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 hDV103S1A0JD37 113 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 PIK3CD-AS1Q5SR53 167 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 Q9HAA7 133 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 NOTCH3Q9UM47 2321 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 MGAM2Q2M2H8 2515 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 IGHV3-64A0A075B6Q5 118 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 A6NN06 94 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 M0R381 172 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 IGHV3-30-3P0DP02 117 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 FUSP35637 526 aaKnown RBP eCLIP6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 RPL39LQ96EH5 51 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 SMAD5-AS1Q9Y6J3 95 aa6.75□□□□□ -1.33
PDLIM5-207ENST00000503974 IGKV2-40A0A087WW87 121 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-207ENST00000503974 A8MU10 97 aa6.74□□□□□ -1.33
PDLIM5-207ENST00000503974 ERC2-IT1O76042 136 aa6.74□□□□□ -1.33
PDLIM5-207ENST00000503974 IGKV2D-40P01614 121 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-207ENST00000503974 PDE6HQ13956 83 aa6.74□□□□□ -1.33
PDLIM5-207ENST00000503974 TRAV22A0A0B4J277 110 aa6.73□□□□□ -1.33
PDLIM5-207ENST00000503974 PSPHP1O15172 72 aa6.73□□□□□ -1.33
PDLIM5-207ENST00000503974 KRTAP10-11P60412 298 aa6.73□□□□□ -1.33
PDLIM5-207ENST00000503974 ZNF625Q96I27 306 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-207ENST00000503974 IGKV3D-20A0A0C4DH25 116 aa6.73□□□□□ -1.33
PDLIM5-207ENST00000503974 K7EQG2 157 aa6.73□□□□□ -1.33
PDLIM5-207ENST00000503974 FAM19A3Q7Z5A8 133 aa6.73□□□□□ -1.33
PDLIM5-207ENST00000503974 DIRC1Q969H9 104 aa6.73□□□□□ -1.33
PDLIM5-207ENST00000503974 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.72□□□□□ -1.33
PDLIM5-207ENST00000503974 ATP11AUNQ6ZP68 121 aa6.72□□□□□ -1.33
PDLIM5-207ENST00000503974 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
PDLIM5-207ENST00000503974 Q8TAT8 98 aa6.72□□□□□ -1.33
PDLIM5-207ENST00000503974 OVOL2Q9BRP0 275 aa6.72□□□□□ -1.33
PDLIM5-207ENST00000503974 VCYO14598 125 aa6.72□□□□□ -1.33
PDLIM5-207ENST00000503974 PPP1R17O96001 155 aa6.72□□□□□ -1.33
PDLIM5-207ENST00000503974 TMEM254Q8TBM7 123 aa6.72□□□□□ -1.33
PDLIM5-207ENST00000503974 C19orf73Q9NVV2 129 aa6.72□□□□□ -1.33
PDLIM5-207ENST00000503974 NDUFA12Q9UI09 145 aa6.72□□□□□ -1.33
PDLIM5-207ENST00000503974 DNAH3Q8TD57 4116 aa6.71□□□□□ -1.33
PDLIM5-207ENST00000503974 RPL39P62891 51 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-207ENST00000503974 SPANXN1Q5VSR9 72 aa6.71□□□□□ -1.34
PDLIM5-207ENST00000503974 LINC00269Q8N2A0 174 aa6.71□□□□□ -1.34
PDLIM5-207ENST00000503974 SORL1Q92673 2214 aa6.71□□□□□ -1.34
PDLIM5-207ENST00000503974 C16orf90A8MZG2 172 aa6.7□□□□□ -1.34
PDLIM5-207ENST00000503974 RPL11P62913 178 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-207ENST00000503974 ODF3L2Q3SX64 289 aa6.7□□□□□ -1.34
PDLIM5-207ENST00000503974 IGKV3-7A0A075B6H7 116 aa6.7□□□□□ -1.34
PDLIM5-207ENST00000503974 C11orf21Q9P2W6 132 aa6.7□□□□□ -1.34
PDLIM5-207ENST00000503974 NBEAL1Q6ZS30 2694 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms