RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 CHCHD10Q8WYQ3 142 aaPredicted RBP15.4■□□□□ 0.06
PCDH1-204ENST00000503492 CD164L2Q6UWJ8 174 aa15.39■□□□□ 0.05
PCDH1-204ENST00000503492 CARD19Q96LW7 228 aa15.39■□□□□ 0.05
PCDH1-204ENST00000503492 IGLV10-54A0A075B6I4 117 aa15.39■□□□□ 0.05
PCDH1-204ENST00000503492 Q8IZM0 81 aa15.39■□□□□ 0.05
PCDH1-204ENST00000503492 ANKRD29Q8N6D5 301 aa15.39■□□□□ 0.05
PCDH1-204ENST00000503492 M0QXV9 152 aa15.38■□□□□ 0.05
PCDH1-204ENST00000503492 PFN2P35080 140 aa15.37■□□□□ 0.05
PCDH1-204ENST00000503492 LST1O00453 97 aa15.35■□□□□ 0.05
PCDH1-204ENST00000503492 PPDPFLQ8WWR9 84 aa15.35■□□□□ 0.05
PCDH1-204ENST00000503492 COX7A2LO14548 114 aa15.35■□□□□ 0.05
PCDH1-204ENST00000503492 PCP4P48539 62 aa15.35■□□□□ 0.05
PCDH1-204ENST00000503492 CCL18P55774 89 aa15.35■□□□□ 0.05
PCDH1-204ENST00000503492 C2orf82Q6UX34 121 aa15.35■□□□□ 0.05
PCDH1-204ENST00000503492 SND1-IT1Q9HBX3 110 aa15.35■□□□□ 0.05
PCDH1-204ENST00000503492 STAB1Q9NY15 2570 aa15.35■□□□□ 0.05
PCDH1-204ENST00000503492 TRBV10-2A0A0K0K1G8 114 aa15.34■□□□□ 0.05
PCDH1-204ENST00000503492 CMYA5Q8N3K9 4069 aa15.34■□□□□ 0.05
PCDH1-204ENST00000503492 IGKV2-28A0A075B6P5 120 aa15.33■□□□□ 0.04
PCDH1-204ENST00000503492 IGKV2D-28P01615 120 aa15.33■□□□□ 0.04
PCDH1-204ENST00000503492 LYPD5Q6UWN5 251 aa15.33■□□□□ 0.04
PCDH1-204ENST00000503492 CYSRT1A8MQ03 144 aa15.33■□□□□ 0.04
PCDH1-204ENST00000503492 KIAA0087Q14695 138 aa15.33■□□□□ 0.04
PCDH1-204ENST00000503492 LINC01600Q96MT4 127 aa15.33■□□□□ 0.04
PCDH1-204ENST00000503492 LINC00337Q8N6G1 96 aa15.32■□□□□ 0.04
PCDH1-204ENST00000503492 Q6ZTC4 211 aa15.31■□□□□ 0.04
PCDH1-204ENST00000503492 GAGE12HA6NDE8 117 aa15.31■□□□□ 0.04
PCDH1-204ENST00000503492 TRAV13-2A0A0B4J235 113 aa15.3■□□□□ 0.04
PCDH1-204ENST00000503492 MALP21145 153 aa15.29■□□□□ 0.04
PCDH1-204ENST00000503492 KLK12Q9UKR0 248 aa15.29■□□□□ 0.04
PCDH1-204ENST00000503492 CRPP02741 224 aa15.29■□□□□ 0.04
PCDH1-204ENST00000503492 CKS1BP61024 79 aa15.29■□□□□ 0.04
PCDH1-204ENST00000503492 KPRPQ5T749 579 aaPredicted RBP15.29■□□□□ 0.04
PCDH1-204ENST00000503492 SPATA25Q9BR10 227 aa15.29■□□□□ 0.04
PCDH1-204ENST00000503492 PRR34Q9NV39 138 aa15.28■□□□□ 0.04
PCDH1-204ENST00000503492 H3BNG1 76 aa15.27■□□□□ 0.04
PCDH1-204ENST00000503492 NTN5Q8WTR8 489 aaPredicted RBP15.27■□□□□ 0.04
PCDH1-204ENST00000503492 CFAP161Q6P656 301 aa15.27■□□□□ 0.03
PCDH1-204ENST00000503492 PKD1L1Q8TDX9 2849 aa15.26■□□□□ 0.03
PCDH1-204ENST00000503492 ENHOQ6UWT2 76 aa15.26■□□□□ 0.03
PCDH1-204ENST00000503492 A0A0J9YWU9 116 aa15.25■□□□□ 0.03
PCDH1-204ENST00000503492 ANK2Q01484 3957 aa15.25■□□□□ 0.03
PCDH1-204ENST00000503492 H3BT86 120 aa15.25■□□□□ 0.03
PCDH1-204ENST00000503492 CXCL5P42830 114 aa15.25■□□□□ 0.03
PCDH1-204ENST00000503492 C21orf62-AS1Q17RA5 79 aa15.25■□□□□ 0.03
PCDH1-204ENST00000503492 RPL28P46779 137 aaKnown RBP15.24■□□□□ 0.03
PCDH1-204ENST00000503492 MAST4O15021 2626 aa15.22■□□□□ 0.03
PCDH1-204ENST00000503492 WFDC10BQ8IUB3 73 aa15.22■□□□□ 0.03
PCDH1-204ENST00000503492 TEX49A0A1B0GTD5 131 aa15.21■□□□□ 0.03
PCDH1-204ENST00000503492 NANOS2P60321 138 aaKnown RBP15.21■□□□□ 0.03
PCDH1-204ENST00000503492 KLK5Q9Y337 293 aaPredicted RBP15.21■□□□□ 0.03
PCDH1-204ENST00000503492 DNAH3Q8TD57 4116 aa15.21■□□□□ 0.02
PCDH1-204ENST00000503492 SMIM11BQ8TCY0 68 aa15.2■□□□□ 0.02
PCDH1-204ENST00000503492 FAM218AQ96MZ4 157 aa15.2■□□□□ 0.02
PCDH1-204ENST00000503492 SIGMAR1Q99720 223 aa15.2■□□□□ 0.02
PCDH1-204ENST00000503492 CDIP1Q9H305 208 aa15.2■□□□□ 0.02
PCDH1-204ENST00000503492 C9orf116Q5BN46 136 aaPredicted RBP15.2■□□□□ 0.02
PCDH1-204ENST00000503492 COX17Q14061 63 aa15.19■□□□□ 0.02
PCDH1-204ENST00000503492 C6orf223Q8N319 242 aa15.19■□□□□ 0.02
PCDH1-204ENST00000503492 UBE2WQ96B02 151 aa15.19■□□□□ 0.02
PCDH1-204ENST00000503492 TENM3Q9P273 2699 aa15.18■□□□□ 0.02
PCDH1-204ENST00000503492 SPAG11BQ08648 103 aa15.18■□□□□ 0.02
PCDH1-204ENST00000503492 C11orf45Q8TAV5 145 aa15.17■□□□□ 0.02
PCDH1-204ENST00000503492 TRACP01848 142 aa15.17■□□□□ 0.02
PCDH1-204ENST00000503492 ESRGQ1W209 222 aa15.17■□□□□ 0.02
PCDH1-204ENST00000503492 LINC00526Q96FQ7 95 aa15.17■□□□□ 0.02
PCDH1-204ENST00000503492 PRB2P02812 416 aaPredicted RBP15.16■□□□□ 0.02
PCDH1-204ENST00000503492 C10orf25Q5T742 122 aa15.16■□□□□ 0.02
PCDH1-204ENST00000503492 DEFB131BA0A096LNP1 70 aa15.16■□□□□ 0.02
PCDH1-204ENST00000503492 UNQ6190/PRO20217Q6UXQ8 127 aa15.16■□□□□ 0.02
PCDH1-204ENST00000503492 OR13C6PQ8NH95 151 aa15.15■□□□□ 0.02
PCDH1-204ENST00000503492 TRAV8-4A0A0B4J246 113 aa15.14■□□□□ 0.01
PCDH1-204ENST00000503492 PRR3P79522 188 aaKnown RBP15.13■□□□□ 0.01
PCDH1-204ENST00000503492 BAHCC1Q9P281 2608 aa15.12■□□□□ 0.01
PCDH1-204ENST00000503492 COL6A5A8TX70 2615 aa15.11■□□□□ 0.01
PCDH1-204ENST00000503492 NDUFC2O95298 119 aa15.1■□□□□ 0.01
PCDH1-204ENST00000503492 KRTAP26-1Q6PEX3 210 aa15.09■□□□□ 0.01
PCDH1-204ENST00000503492 NOTCH1P46531 2555 aa15.08■□□□□ 0
PCDH1-204ENST00000503492 A0A087WYN8 130 aa15.08■□□□□ 0
PCDH1-204ENST00000503492 Q8NDZ9 215 aa15.08■□□□□ 0
PCDH1-204ENST00000503492 H0YGX0 51 aa15.07■□□□□ 0
PCDH1-204ENST00000503492 Q9HAA7 133 aa15.07■□□□□ 0
PCDH1-204ENST00000503492 BAALC-AS2P0C853 105 aa15.07■□□□□ 0
PCDH1-204ENST00000503492 DEFB121Q5J5C9 76 aa15.07■□□□□ 0
PCDH1-204ENST00000503492 XGP55808 180 aa15.06■□□□□ 0
PCDH1-204ENST00000503492 K7EIL1 84 aa15.06■□□□□ 0
PCDH1-204ENST00000503492 C22orf24Q9Y442 160 aa15.05■□□□□ 0
PCDH1-204ENST00000503492 TM2D3Q9BRN9 247 aa15.05■□□□□ -0
PCDH1-204ENST00000503492 MT-ATP8P03928 68 aa15.04■□□□□ -0
PCDH1-204ENST00000503492 GVQW2A0A096LPI5 108 aaPredicted RBP15.04■□□□□ -0
PCDH1-204ENST00000503492 LINC01556Q5JQF7 62 aa15.03■□□□□ -0
PCDH1-204ENST00000503492 MUC7Q8TAX7 377 aa15.03■□□□□ -0
PCDH1-204ENST00000503492 MRAPQ8TCY5 172 aa15.03■□□□□ -0
PCDH1-204ENST00000503492 C6orf48Q9UBA6 75 aa15.03■□□□□ -0
PCDH1-204ENST00000503492 NCR3O14931 201 aa15.01□□□□□ -0.01
PCDH1-204ENST00000503492 HIGD2BQ4VC39 106 aa15.01□□□□□ -0.01
PCDH1-204ENST00000503492 TMEM126AQ9H061 195 aa15□□□□□ -0.01
PCDH1-204ENST00000503492 SCGB1A1P11684 91 aa15□□□□□ -0.01
PCDH1-204ENST00000503492 TRAV10A0A0B4J240 114 aa14.99□□□□□ -0.01
PCDH1-204ENST00000503492 LECT2O14960 151 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms