RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 ERG28Q9UKR5 140 aa12.92□□□□□ -0.34
ARHGEF28-205ENST00000503341 COPS9Q8WXC6 57 aa12.92□□□□□ -0.34
ARHGEF28-205ENST00000503341 GAGE12HA6NDE8 117 aa12.91□□□□□ -0.34
ARHGEF28-205ENST00000503341 PPDPFQ9H3Y8 114 aa12.91□□□□□ -0.34
ARHGEF28-205ENST00000503341 LOC107984156A0A0G2JMH3 177 aa12.9□□□□□ -0.34
ARHGEF28-205ENST00000503341 IBA57-AS1B1ANH7 110 aa12.9□□□□□ -0.34
ARHGEF28-205ENST00000503341 MALP21145 153 aa12.9□□□□□ -0.34
ARHGEF28-205ENST00000503341 KIAA0087Q14695 138 aa12.9□□□□□ -0.34
ARHGEF28-205ENST00000503341 ARL17AQ8IVW1 177 aa12.9□□□□□ -0.34
ARHGEF28-205ENST00000503341 NBEAL1Q6ZS30 2694 aa12.89□□□□□ -0.35
ARHGEF28-205ENST00000503341 UBE2WQ96B02 151 aa12.89□□□□□ -0.35
ARHGEF28-205ENST00000503341 CRPP02741 224 aa12.88□□□□□ -0.35
ARHGEF28-205ENST00000503341 MIR7-3HGQ8N6C7 128 aa12.88□□□□□ -0.35
ARHGEF28-205ENST00000503341 C15orf53Q8NAA6 179 aa12.88□□□□□ -0.35
ARHGEF28-205ENST00000503341 TRAV8-4A0A0B4J246 113 aa12.88□□□□□ -0.35
ARHGEF28-205ENST00000503341 H7C2G1 150 aa12.88□□□□□ -0.35
ARHGEF28-205ENST00000503341 LINC00158P58513 81 aa12.88□□□□□ -0.35
ARHGEF28-205ENST00000503341 C2orf82Q6UX34 121 aa12.88□□□□□ -0.35
ARHGEF28-205ENST00000503341 MGAM2Q2M2H8 2515 aa12.87□□□□□ -0.35
ARHGEF28-205ENST00000503341 H3BMG7 143 aa12.87□□□□□ -0.35
ARHGEF28-205ENST00000503341 LYRM7Q5U5X0 104 aa12.87□□□□□ -0.35
ARHGEF28-205ENST00000503341 KLK5Q9Y337 293 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF28-205ENST00000503341 HUWE1Q7Z6Z7 4374 aaKnown RBP12.86□□□□□ -0.35
ARHGEF28-205ENST00000503341 CKS1BP61024 79 aa12.86□□□□□ -0.35
ARHGEF28-205ENST00000503341 CFAP161Q6P656 301 aa12.86□□□□□ -0.35
ARHGEF28-205ENST00000503341 PFN2P35080 140 aa12.85□□□□□ -0.35
ARHGEF28-205ENST00000503341 CXCL5P42830 114 aa12.85□□□□□ -0.35
ARHGEF28-205ENST00000503341 Q1RN00 199 aa12.85□□□□□ -0.35
ARHGEF28-205ENST00000503341 LINC01556Q5JQF7 62 aa12.85□□□□□ -0.35
ARHGEF28-205ENST00000503341 PSMB2P49721 201 aa12.84□□□□□ -0.35
ARHGEF28-205ENST00000503341 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.36
ARHGEF28-205ENST00000503341 TRBV30A0A0K0K1B3 111 aa12.82□□□□□ -0.36
ARHGEF28-205ENST00000503341 TRBV20-1A0A075B6N2 111 aa12.82□□□□□ -0.36
ARHGEF28-205ENST00000503341 TCL1BO95988 128 aa12.82□□□□□ -0.36
ARHGEF28-205ENST00000503341 RPL13AP40429 203 aaKnown RBP12.82□□□□□ -0.36
ARHGEF28-205ENST00000503341 KRTAP26-1Q6PEX3 210 aa12.82□□□□□ -0.36
ARHGEF28-205ENST00000503341 B9D2Q9BPU9 175 aa12.82□□□□□ -0.36
ARHGEF28-205ENST00000503341 F8W1H4 67 aa12.8□□□□□ -0.36
ARHGEF28-205ENST00000503341 DNAH10OSP0CZ25 163 aa12.8□□□□□ -0.36
ARHGEF28-205ENST00000503341 CCL18P55774 89 aa12.8□□□□□ -0.36
ARHGEF28-205ENST00000503341 SPAG11BQ08648 103 aa12.8□□□□□ -0.36
ARHGEF28-205ENST00000503341 TRIAP1O43715 76 aa12.8□□□□□ -0.36
ARHGEF28-205ENST00000503341 LINC00588Q9Y4M8 146 aa12.8□□□□□ -0.36
ARHGEF28-205ENST00000503341 SND1-IT1Q9HBX3 110 aa12.79□□□□□ -0.36
ARHGEF28-205ENST00000503341 PRO0461Q9UI25 63 aa12.79□□□□□ -0.36
ARHGEF28-205ENST00000503341 COX17Q14061 63 aa12.78□□□□□ -0.36
ARHGEF28-205ENST00000503341 C6orf223Q8N319 242 aa12.78□□□□□ -0.36
ARHGEF28-205ENST00000503341 WFDC2Q14508 124 aa12.76□□□□□ -0.37
ARHGEF28-205ENST00000503341 UNQ6190/PRO20217Q6UXQ8 127 aa12.76□□□□□ -0.37
ARHGEF28-205ENST00000503341 LINC00526Q96FQ7 95 aa12.76□□□□□ -0.37
ARHGEF28-205ENST00000503341 IGKV2-28A0A075B6P5 120 aa12.75□□□□□ -0.37
ARHGEF28-205ENST00000503341 IGKV2D-28P01615 120 aa12.75□□□□□ -0.37
ARHGEF28-205ENST00000503341 C10orf25Q5T742 122 aa12.75□□□□□ -0.37
ARHGEF28-205ENST00000503341 MTURNQ8N3F0 131 aa12.75□□□□□ -0.37
ARHGEF28-205ENST00000503341 C9orf116Q5BN46 136 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF28-205ENST00000503341 C1orf43Q9BWL3 253 aa12.74□□□□□ -0.37
ARHGEF28-205ENST00000503341 COX6CP09669 75 aa12.74□□□□□ -0.37
ARHGEF28-205ENST00000503341 NTN5Q8WTR8 489 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF28-205ENST00000503341 TRAV13-2A0A0B4J235 113 aa12.73□□□□□ -0.37
ARHGEF28-205ENST00000503341 OCIAD2Q56VL3 154 aa12.72□□□□□ -0.37
ARHGEF28-205ENST00000503341 LINC00337Q8N6G1 96 aa12.72□□□□□ -0.37
ARHGEF28-205ENST00000503341 SMCPP49901 116 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF28-205ENST00000503341 ATXN8Q156A1 80 aa12.71□□□□□ -0.37
ARHGEF28-205ENST00000503341 IGKV2D-24A0A075B6R9 120 aa12.7□□□□□ -0.38
ARHGEF28-205ENST00000503341 GVQW2A0A096LPI5 108 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF28-205ENST00000503341 UPK3BQ9BT76 320 aa12.7□□□□□ -0.38
ARHGEF28-205ENST00000503341 DNAH9Q9NYC9 4486 aa12.7□□□□□ -0.38
ARHGEF28-205ENST00000503341 C15orf56Q8N910 161 aa12.69□□□□□ -0.38
ARHGEF28-205ENST00000503341 ZNF561-AS1K7EIQ3 104 aa12.68□□□□□ -0.38
ARHGEF28-205ENST00000503341 HIGD2BQ4VC39 106 aa12.68□□□□□ -0.38
ARHGEF28-205ENST00000503341 MUC7Q8TAX7 377 aa12.68□□□□□ -0.38
ARHGEF28-205ENST00000503341 NHLRC4P0CG21 123 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF28-205ENST00000503341 Q9HAA7 133 aa12.68□□□□□ -0.38
ARHGEF28-205ENST00000503341 C6orf48Q9UBA6 75 aa12.68□□□□□ -0.38
ARHGEF28-205ENST00000503341 CLEC2BQ92478 149 aa12.67□□□□□ -0.38
ARHGEF28-205ENST00000503341 ETDBQ3ZM63 59 aa12.66□□□□□ -0.38
ARHGEF28-205ENST00000503341 LINC01620Q4KN68 170 aa12.66□□□□□ -0.38
ARHGEF28-205ENST00000503341 C9JAW5 83 aa12.65□□□□□ -0.38
ARHGEF28-205ENST00000503341 NDUFC2O95298 119 aa12.65□□□□□ -0.38
ARHGEF28-205ENST00000503341 RPL28P46779 137 aaKnown RBP12.65□□□□□ -0.38
ARHGEF28-205ENST00000503341 LST1O00453 97 aa12.64□□□□□ -0.39
ARHGEF28-205ENST00000503341 C2orf48Q96LS8 159 aa12.64□□□□□ -0.39
ARHGEF28-205ENST00000503341 CAMK2N2Q96S95 79 aa12.64□□□□□ -0.39
ARHGEF28-205ENST00000503341 K7ERU9 68 aa12.64□□□□□ -0.39
ARHGEF28-205ENST00000503341 APLNQ9ULZ1 77 aa12.64□□□□□ -0.39
ARHGEF28-205ENST00000503341 SLC25A20O43772 301 aa12.62□□□□□ -0.39
ARHGEF28-205ENST00000503341 SMIM11BQ8TCY0 68 aa12.62□□□□□ -0.39
ARHGEF28-205ENST00000503341 PRR3P79522 188 aaKnown RBP12.62□□□□□ -0.39
ARHGEF28-205ENST00000503341 Q6ZRU5 148 aa12.61□□□□□ -0.39
ARHGEF28-205ENST00000503341 OR13C6PQ8NH95 151 aa12.61□□□□□ -0.39
ARHGEF28-205ENST00000503341 Q8NDZ9 215 aa12.6□□□□□ -0.39
ARHGEF28-205ENST00000503341 F8WDY8 70 aa12.6□□□□□ -0.39
ARHGEF28-205ENST00000503341 M0QXV9 152 aa12.6□□□□□ -0.39
ARHGEF28-205ENST00000503341 TRBV10-2A0A0K0K1G8 114 aa12.59□□□□□ -0.39
ARHGEF28-205ENST00000503341 RMI2Q96E14 147 aa12.58□□□□□ -0.39
ARHGEF28-205ENST00000503341 LINC01600Q96MT4 127 aa12.58□□□□□ -0.39
ARHGEF28-205ENST00000503341 COL7A1Q02388 2944 aa12.58□□□□□ -0.4
ARHGEF28-205ENST00000503341 ANKRD29Q8N6D5 301 aa12.57□□□□□ -0.4
ARHGEF28-205ENST00000503341 CASC10Q5T4H9 136 aa12.56□□□□□ -0.4
ARHGEF28-205ENST00000503341 TEN1Q86WV5 123 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms