RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 FN1P02751 2386 aaKnown RBP11.45□□□□□ -0.58
VCAN-204ENST00000502527 FAM240AA0A1B0GVK7 77 aa11.45□□□□□ -0.58
VCAN-204ENST00000502527 CKS1BP61024 79 aa11.45□□□□□ -0.58
VCAN-204ENST00000502527 CITED1Q99966 193 aa11.45□□□□□ -0.58
VCAN-204ENST00000502527 SNCGO76070 127 aa11.44□□□□□ -0.58
VCAN-204ENST00000502527 CLPSL2Q6UWE3 100 aa11.44□□□□□ -0.58
VCAN-204ENST00000502527 MIFP14174 115 aa11.44□□□□□ -0.58
VCAN-204ENST00000502527 OTOGQ6ZRI0 2925 aa11.43□□□□□ -0.58
VCAN-204ENST00000502527 FAM218AQ96MZ4 157 aa11.43□□□□□ -0.58
VCAN-204ENST00000502527 C11orf68Q9H3H3 251 aaKnown RBP11.43□□□□□ -0.58
VCAN-204ENST00000502527 VWFP04275 2813 aa11.43□□□□□ -0.58
VCAN-204ENST00000502527 NOTCH2Q04721 2471 aa11.43□□□□□ -0.58
VCAN-204ENST00000502527 TRAV26-1A0A087WT03 109 aa11.42□□□□□ -0.58
VCAN-204ENST00000502527 ATP5G1P05496 136 aa11.42□□□□□ -0.58
VCAN-204ENST00000502527 LINC00269Q8N2A0 174 aa11.42□□□□□ -0.58
VCAN-204ENST00000502527 NBEAL2Q6ZNJ1 2754 aa11.42□□□□□ -0.58
VCAN-204ENST00000502527 BAALC-AS2P0C853 105 aa11.42□□□□□ -0.58
VCAN-204ENST00000502527 CD164L2Q6UWJ8 174 aa11.42□□□□□ -0.58
VCAN-204ENST00000502527 Q8NAQ8 132 aa11.42□□□□□ -0.58
VCAN-204ENST00000502527 SMIM11BQ8TCY0 68 aa11.41□□□□□ -0.58
VCAN-204ENST00000502527 MRPL23Q16540 153 aaKnown RBP11.4□□□□□ -0.58
VCAN-204ENST00000502527 NSD1Q96L73 2696 aaPredicted RBP11.4□□□□□ -0.58
VCAN-204ENST00000502527 H0YGX0 51 aa11.39□□□□□ -0.59
VCAN-204ENST00000502527 ANGP03950 147 aaKnown RBP11.39□□□□□ -0.59
VCAN-204ENST00000502527 SPART-AS1P0CW21 52 aa11.39□□□□□ -0.59
VCAN-204ENST00000502527 GAGE2BQ13066 116 aa11.39□□□□□ -0.59
VCAN-204ENST00000502527 GAGE2EQ4V326 116 aa11.39□□□□□ -0.59
VCAN-204ENST00000502527 C15orf53Q8NAA6 179 aa11.39□□□□□ -0.59
VCAN-204ENST00000502527 WFDC9Q8NEX5 89 aa11.39□□□□□ -0.59
VCAN-204ENST00000502527 CHCHD10Q8WYQ3 142 aaPredicted RBP11.39□□□□□ -0.59
VCAN-204ENST00000502527 GAGE2DQ9UEU5 116 aa11.39□□□□□ -0.59
VCAN-204ENST00000502527 CELA1Q9UNI1 258 aa11.39□□□□□ -0.59
VCAN-204ENST00000502527 REG3AQ06141 175 aa11.38□□□□□ -0.59
VCAN-204ENST00000502527 ACYP1P07311 99 aa11.37□□□□□ -0.59
VCAN-204ENST00000502527 CXCL5P42830 114 aa11.37□□□□□ -0.59
VCAN-204ENST00000502527 OR13C6PQ8NH95 151 aa11.37□□□□□ -0.59
VCAN-204ENST00000502527 WIPF1O43516 503 aa11.36□□□□□ -0.59
VCAN-204ENST00000502527 MALP21145 153 aa11.36□□□□□ -0.59
VCAN-204ENST00000502527 KIAA0087Q14695 138 aa11.36□□□□□ -0.59
VCAN-204ENST00000502527 Q6Q795 121 aa11.36□□□□□ -0.59
VCAN-204ENST00000502527 DNAL4O96015 105 aa11.36□□□□□ -0.59
VCAN-204ENST00000502527 IGHV4-30-4P0DP06 118 aa11.36□□□□□ -0.59
VCAN-204ENST00000502527 COX17Q14061 63 aa11.36□□□□□ -0.59
VCAN-204ENST00000502527 Q9HAA7 133 aa11.36□□□□□ -0.59
VCAN-204ENST00000502527 IGLV10-54A0A075B6I4 117 aa11.35□□□□□ -0.59
VCAN-204ENST00000502527 Q8N3U1 123 aa11.35□□□□□ -0.59
VCAN-204ENST00000502527 C22orf24Q9Y442 160 aa11.35□□□□□ -0.59
VCAN-204ENST00000502527 TENM1Q9UKZ4 2725 aa11.35□□□□□ -0.59
VCAN-204ENST00000502527 HTN3P15516 51 aa11.34□□□□□ -0.59
VCAN-204ENST00000502527 LELP1Q5T871 98 aa11.34□□□□□ -0.59
VCAN-204ENST00000502527 A0A087WYN8 130 aa11.34□□□□□ -0.59
VCAN-204ENST00000502527 INAFM2P0DMQ5 153 aa11.33□□□□□ -0.6
VCAN-204ENST00000502527 TTC32Q5I0X7 151 aa11.32□□□□□ -0.6
VCAN-204ENST00000502527 ANAPC13Q9BS18 74 aa11.32□□□□□ -0.6
VCAN-204ENST00000502527 NDUFC2O95298 119 aa11.31□□□□□ -0.6
VCAN-204ENST00000502527 KLK5Q9Y337 293 aaPredicted RBP11.29□□□□□ -0.6
VCAN-204ENST00000502527 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
VCAN-204ENST00000502527 LECT2O14960 151 aa11.28□□□□□ -0.6
VCAN-204ENST00000502527 ATRQ13535 2644 aa11.28□□□□□ -0.6
VCAN-204ENST00000502527 TEP1Q99973 2627 aaKnown RBP11.28□□□□□ -0.6
VCAN-204ENST00000502527 NDUFV3P56181 108 aaKnown RBP11.28□□□□□ -0.6
VCAN-204ENST00000502527 PRR34Q9NV39 138 aa11.28□□□□□ -0.6
VCAN-204ENST00000502527 PRR3P79522 188 aaKnown RBP11.26□□□□□ -0.61
VCAN-204ENST00000502527 C9orf116Q5BN46 136 aaPredicted RBP11.26□□□□□ -0.61
VCAN-204ENST00000502527 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
VCAN-204ENST00000502527 KLK12Q9UKR0 248 aa11.26□□□□□ -0.61
VCAN-204ENST00000502527 TRBV7-7A0A0K0K1E9 115 aa11.25□□□□□ -0.61
VCAN-204ENST00000502527 SPAG11BQ08648 103 aa11.25□□□□□ -0.61
VCAN-204ENST00000502527 MUC7Q8TAX7 377 aa11.25□□□□□ -0.61
VCAN-204ENST00000502527 LYPD5Q6UWN5 251 aa11.24□□□□□ -0.61
VCAN-204ENST00000502527 LINC00643Q86TS7 51 aa11.24□□□□□ -0.61
VCAN-204ENST00000502527 NANOS2P60321 138 aaKnown RBP11.24□□□□□ -0.61
VCAN-204ENST00000502527 A0A1B0GX51 115 aa11.23□□□□□ -0.61
VCAN-204ENST00000502527 GAGE2AQ6NT46 116 aa11.23□□□□□ -0.61
VCAN-204ENST00000502527 SDIM1Q6ZPB5 146 aa11.23□□□□□ -0.61
VCAN-204ENST00000502527 ENHOQ6UWT2 76 aa11.23□□□□□ -0.61
VCAN-204ENST00000502527 UNQ6190/PRO20217Q6UXQ8 127 aa11.23□□□□□ -0.61
VCAN-204ENST00000502527 OBSCN-AS1Q96MR7 158 aa11.23□□□□□ -0.61
VCAN-204ENST00000502527 ORMDL1Q9P0S3 153 aa11.23□□□□□ -0.61
VCAN-204ENST00000502527 NHLRC4P0CG21 123 aaPredicted RBP11.22□□□□□ -0.61
VCAN-204ENST00000502527 SMCR5Q8TEV8 140 aa11.22□□□□□ -0.61
VCAN-204ENST00000502527 IMUPQ9GZP8 106 aa11.22□□□□□ -0.61
VCAN-204ENST00000502527 A0A0J9YWU9 116 aa11.21□□□□□ -0.61
VCAN-204ENST00000502527 C10orf25Q5T742 122 aa11.21□□□□□ -0.61
VCAN-204ENST00000502527 C6orf223Q8N319 242 aa11.21□□□□□ -0.61
VCAN-204ENST00000502527 CYSRT1A8MQ03 144 aa11.21□□□□□ -0.62
VCAN-204ENST00000502527 H3BNG1 76 aa11.21□□□□□ -0.62
VCAN-204ENST00000502527 SLPIP03973 132 aa11.2□□□□□ -0.62
VCAN-204ENST00000502527 LINC00167Q96N53 147 aa11.2□□□□□ -0.62
VCAN-204ENST00000502527 NCR3O14931 201 aa11.19□□□□□ -0.62
VCAN-204ENST00000502527 C9orf129Q5T035 196 aaKnown RBP11.19□□□□□ -0.62
VCAN-204ENST00000502527 Q8N814 137 aa11.19□□□□□ -0.62
VCAN-204ENST00000502527 C14orf132Q9NPU4 83 aa11.19□□□□□ -0.62
VCAN-204ENST00000502527 S100A7L2Q5SY68 101 aa11.18□□□□□ -0.62
VCAN-204ENST00000502527 GVQW2A0A096LPI5 108 aaPredicted RBP11.18□□□□□ -0.62
VCAN-204ENST00000502527 KRTAP10-11P60412 298 aa11.18□□□□□ -0.62
VCAN-204ENST00000502527 Q8NDZ9 215 aa11.18□□□□□ -0.62
VCAN-204ENST00000502527 LINC00526Q96FQ7 95 aa11.18□□□□□ -0.62
VCAN-204ENST00000502527 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
VCAN-204ENST00000502527 RETNQ9HD89 108 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms