RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.29□□□□□ -2.2
PTPRK-215ENST00000498284 LINC00322Q6ZN03 302 aaPredicted RBP1.29□□□□□ -2.2
PTPRK-215ENST00000498284 TEN1Q86WV5 123 aa1.29□□□□□ -2.2
PTPRK-215ENST00000498284 CLECL1Q8IZS7 167 aa1.29□□□□□ -2.2
PTPRK-215ENST00000498284 LINC00269Q8N2A0 174 aa1.29□□□□□ -2.2
PTPRK-215ENST00000498284 C10orf111Q8N326 155 aa1.29□□□□□ -2.2
PTPRK-215ENST00000498284 OR5D14Q8NGL3 314 aa1.29□□□□□ -2.2
PTPRK-215ENST00000498284 OTOSQ8NHW6 89 aa1.29□□□□□ -2.2
PTPRK-215ENST00000498284 MAGOHBQ96A72 148 aaKnown RBP1.29□□□□□ -2.2
PTPRK-215ENST00000498284 GAFA1Q96PS6 74 aa1.29□□□□□ -2.2
PTPRK-215ENST00000498284 MRPL57Q9BQC6 102 aaKnown RBP1.29□□□□□ -2.2
PTPRK-215ENST00000498284 LINC00467Q9BRT7 94 aa1.29□□□□□ -2.2
PTPRK-215ENST00000498284 C14orf132Q9NPU4 83 aa1.29□□□□□ -2.2
PTPRK-215ENST00000498284 HILPDAQ9Y5L2 63 aa1.29□□□□□ -2.2
PTPRK-215ENST00000498284 TRAV12-1A0A0B4J245 112 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 A0A1B0GWA3 101 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 FAM25AB3EWG3 89 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 FAM25CB3EWG5 89 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 FAM25GB3EWG6 89 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 M0R2N4 97 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 HMGN4O00479 90 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 RNASE3P12724 160 aaKnown RBP1.28□□□□□ -2.2
PTPRK-215ENST00000498284 CCL3L1P16619 93 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 C5orf56Q8N8D9 126 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 OR2T35Q8NGX2 323 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 MYOZ3Q8TDC0 251 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 TMEM203Q969S6 136 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 C12orf57Q99622 126 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 TCEAL7Q9BRU2 100 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 NHP2Q9NX24 153 aaKnown RBP1.28□□□□□ -2.2
PTPRK-215ENST00000498284 APLNQ9ULZ1 77 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 TPRKBQ9Y3C4 175 aa1.28□□□□□ -2.2
PTPRK-215ENST00000498284 LRP1Q07954 4544 aaKnown RBP1.27□□□□□ -2.21
PTPRK-215ENST00000498284 OOSP1A8MZH6 123 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 SMIM6P0DI80 62 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 TPT1P13693 172 aaKnown RBP1.27□□□□□ -2.21
PTPRK-215ENST00000498284 OCIAD2Q56VL3 154 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 MIC13Q5XKP0 118 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 KRTAP26-1Q6PEX3 210 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 ARPINQ7Z6K5 226 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 PPP3R2Q96LZ3 170 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 CST11Q9H112 138 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 SLC35B3Q9H1N7 401 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 METTL1Q9UBP6 276 aaKnown RBP1.27□□□□□ -2.21
PTPRK-215ENST00000498284 LY96Q9Y6Y9 160 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 FAT3Q8TDW7 4589 aa1.27□□□□□ -2.21
PTPRK-215ENST00000498284 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.26□□□□□ -2.21
PTPRK-215ENST00000498284 TRAV10A0A0B4J240 114 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 LOC107984156A0A0G2JMH3 177 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 C3orf85A0A1B0GTC6 90 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 LOC107986453A0A1B0GWG9 222 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 E7EUB6 86 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 C17orf112F2Z3M2 114 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 J3QR89 54 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 M0R135 149 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 CDC42EP2O14613 210 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 NCR2O95944 276 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 IFNA17P01571 189 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 TFF1P04155 84 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 BAALC-AS2P0C853 105 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 SAA1P0DJI8 122 aaPredicted RBP1.26□□□□□ -2.21
PTPRK-215ENST00000498284 PIPP12273 146 aaPredicted RBP1.26□□□□□ -2.21
PTPRK-215ENST00000498284 EDDM3BP56851 147 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 SELENOWP63302 87 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 MRPS36P82909 103 aaKnown RBP1.26□□□□□ -2.21
PTPRK-215ENST00000498284 CDK6Q00534 326 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 PDE6HQ13956 83 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 DEFB135Q30KP9 77 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 IZUMO2Q6UXV1 221 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 ZNF833PQ6ZTB9 187 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 ARL17AQ8IVW1 177 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 UBE2DNLQ8IWF7 75 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 C4orf33Q8N1A6 199 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 OR10AC1Q8NH08 325 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 OR5AK2Q8NH90 309 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 C14orf144Q96I85 54 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 WFDC6Q9BQY6 131 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 WFDC10AQ9H1F0 79 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 COA4Q9NYJ1 87 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 LINC00312Q9Y6C7 94 aa1.26□□□□□ -2.21
PTPRK-215ENST00000498284 A0A087WSZ3 146 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 GEMIN2O14893 280 aaKnown RBP1.25□□□□□ -2.21
PTPRK-215ENST00000498284 TRACP01848 142 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 S100A8P05109 93 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 LINC00032P0C843 101 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 CIRBPQ14011 172 aaKnown RBP1.25□□□□□ -2.21
PTPRK-215ENST00000498284 Q6ZUT4 128 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 SNX29P2Q8IUI4 249 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 TCTEX1D1Q8N7M0 179 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.25□□□□□ -2.21
PTPRK-215ENST00000498284 DYNLRB2Q8TF09 96 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 DEFB104AQ8WTQ1 72 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 SFT2D1Q8WV19 159 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 SPTSSAQ969W0 71 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 DPH3Q96FX2 82 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 LIMD2Q9BT23 127 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 GNG8Q9UK08 70 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 MPC1Q9Y5U8 109 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 TNXBP22105 4242 aa1.25□□□□□ -2.21
PTPRK-215ENST00000498284 CPSF4LA6NMK7 179 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms