RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 ORAOV1Q8WV07 137 aa14.26□□□□□ -0.13
CDKN2A-208ENST00000498124 PLAC8Q9NZF1 115 aa14.26□□□□□ -0.13
CDKN2A-208ENST00000498124 SPAG11BQ08648 103 aa14.25□□□□□ -0.13
CDKN2A-208ENST00000498124 LINC00469Q8N7U9 141 aa14.24□□□□□ -0.13
CDKN2A-208ENST00000498124 C2orf48Q96LS8 159 aa14.24□□□□□ -0.13
CDKN2A-208ENST00000498124 CDKN2A-AS1Q9UH64 79 aa14.24□□□□□ -0.13
CDKN2A-208ENST00000498124 HSPB8Q9UJY1 196 aa14.24□□□□□ -0.13
CDKN2A-208ENST00000498124 PLA2G2DQ9UNK4 145 aa14.24□□□□□ -0.13
CDKN2A-208ENST00000498124 IGLV4-69A0A075B6H9 119 aa14.23□□□□□ -0.13
CDKN2A-208ENST00000498124 LINC00526Q96FQ7 95 aa14.23□□□□□ -0.13
CDKN2A-208ENST00000498124 PACRGQ96M98 296 aaPredicted RBP14.23□□□□□ -0.13
CDKN2A-208ENST00000498124 IGLV5-45A0A087WSX0 123 aa14.22□□□□□ -0.13
CDKN2A-208ENST00000498124 TRAV12-1A0A0B4J245 112 aa14.22□□□□□ -0.13
CDKN2A-208ENST00000498124 IGLC3P0DOY3 106 aa14.22□□□□□ -0.13
CDKN2A-208ENST00000498124 Q6ZRU5 148 aa14.22□□□□□ -0.13
CDKN2A-208ENST00000498124 F8WDY8 70 aa14.21□□□□□ -0.13
CDKN2A-208ENST00000498124 SYCNQ0VAF6 134 aa14.21□□□□□ -0.13
CDKN2A-208ENST00000498124 COA6Q5JTJ3 125 aaKnown RBP14.21□□□□□ -0.13
CDKN2A-208ENST00000498124 CARD19Q96LW7 228 aa14.21□□□□□ -0.13
CDKN2A-208ENST00000498124 CHTOPQ9Y3Y2 248 aaKnown RBP14.21□□□□□ -0.13
CDKN2A-208ENST00000498124 DPH3Q96FX2 82 aa14.2□□□□□ -0.14
CDKN2A-208ENST00000498124 CAMK2N2Q96S95 79 aa14.2□□□□□ -0.14
CDKN2A-208ENST00000498124 H3BRM9 83 aa14.19□□□□□ -0.14
CDKN2A-208ENST00000498124 FABP4P15090 132 aa14.19□□□□□ -0.14
CDKN2A-208ENST00000498124 IGKV2-24A0A0C4DH68 120 aa14.17□□□□□ -0.14
CDKN2A-208ENST00000498124 PRSS2P07478 247 aa14.17□□□□□ -0.14
CDKN2A-208ENST00000498124 PKIGQ9Y2B9 76 aa14.17□□□□□ -0.14
CDKN2A-208ENST00000498124 KIAA0087Q14695 138 aa14.16□□□□□ -0.14
CDKN2A-208ENST00000498124 MAJINQ3KP22 176 aa14.16□□□□□ -0.14
CDKN2A-208ENST00000498124 A0A096LNI7 61 aa14.15□□□□□ -0.14
CDKN2A-208ENST00000498124 C11orf86A6NJI1 115 aa14.15□□□□□ -0.14
CDKN2A-208ENST00000498124 SMIM1B2RUZ4 78 aa14.15□□□□□ -0.14
CDKN2A-208ENST00000498124 F8VRH5 84 aa14.15□□□□□ -0.14
CDKN2A-208ENST00000498124 NDUFA1O15239 70 aa14.15□□□□□ -0.14
CDKN2A-208ENST00000498124 TOMM7Q9P0U1 55 aa14.15□□□□□ -0.14
CDKN2A-208ENST00000498124 H0Y8G0 127 aa14.14□□□□□ -0.15
CDKN2A-208ENST00000498124 ZNF22P17026 224 aaPredicted RBP14.14□□□□□ -0.15
CDKN2A-208ENST00000498124 Q8IZM0 81 aa14.14□□□□□ -0.15
CDKN2A-208ENST00000498124 MAP1LC3CQ9BXW4 147 aa14.14□□□□□ -0.15
CDKN2A-208ENST00000498124 SPINK8P0C7L1 97 aa14.13□□□□□ -0.15
CDKN2A-208ENST00000498124 C6orf226Q5I0X4 101 aa14.13□□□□□ -0.15
CDKN2A-208ENST00000498124 C7orf33Q8WU49 177 aa14.13□□□□□ -0.15
CDKN2A-208ENST00000498124 MRPL35Q9NZE8 188 aaKnown RBP14.13□□□□□ -0.15
CDKN2A-208ENST00000498124 PRR3P79522 188 aaKnown RBP14.12□□□□□ -0.15
CDKN2A-208ENST00000498124 RNF151Q2KHN1 245 aa14.12□□□□□ -0.15
CDKN2A-208ENST00000498124 TMEM170BQ5T4T1 132 aa14.12□□□□□ -0.15
CDKN2A-208ENST00000498124 STPG4Q8N801 248 aa14.12□□□□□ -0.15
CDKN2A-208ENST00000498124 ODF1Q14990 250 aa14.11□□□□□ -0.15
CDKN2A-208ENST00000498124 LRP2P98164 4655 aa14.11□□□□□ -0.15
CDKN2A-208ENST00000498124 CKS1BP61024 79 aa14.1□□□□□ -0.15
CDKN2A-208ENST00000498124 UNQ6190/PRO20217Q6UXQ8 127 aa14.1□□□□□ -0.15
CDKN2A-208ENST00000498124 CXCL5P42830 114 aa14.09□□□□□ -0.15
CDKN2A-208ENST00000498124 COX7B2Q8TF08 81 aa14.09□□□□□ -0.15
CDKN2A-208ENST00000498124 LOC107984640A0A0U1RRK4 108 aa14.08□□□□□ -0.16
CDKN2A-208ENST00000498124 C10orf25Q5T742 122 aa14.08□□□□□ -0.16
CDKN2A-208ENST00000498124 C2orf82Q6UX34 121 aa14.08□□□□□ -0.16
CDKN2A-208ENST00000498124 IGLV5-39A0A0G2JS06 123 aa14.07□□□□□ -0.16
CDKN2A-208ENST00000498124 TRBV30A0A0K0K1B3 111 aa14.07□□□□□ -0.16
CDKN2A-208ENST00000498124 C6orf48Q9UBA6 75 aa14.07□□□□□ -0.16
CDKN2A-208ENST00000498124 PLNP26678 52 aa14.06□□□□□ -0.16
CDKN2A-208ENST00000498124 SYS1-DBNDD2H3BUS1 97 aa14.05□□□□□ -0.16
CDKN2A-208ENST00000498124 S100A6P06703 90 aa14.05□□□□□ -0.16
CDKN2A-208ENST00000498124 LINC00474Q9P2X8 69 aa14.05□□□□□ -0.16
CDKN2A-208ENST00000498124 DPM2O94777 84 aa14.04□□□□□ -0.16
CDKN2A-208ENST00000498124 TMEM223A0PJW6 202 aa14.03□□□□□ -0.16
CDKN2A-208ENST00000498124 LINC01600Q96MT4 127 aa14.03□□□□□ -0.16
CDKN2A-208ENST00000498124 PET117Q6UWS5 81 aa14.02□□□□□ -0.17
CDKN2A-208ENST00000498124 IGKCP01834 107 aa14.01□□□□□ -0.17
CDKN2A-208ENST00000498124 TLX1NBP0CAT3 122 aa14.01□□□□□ -0.17
CDKN2A-208ENST00000498124 PTTG1IPP53801 180 aa14.01□□□□□ -0.17
CDKN2A-208ENST00000498124 RPL18AQ02543 176 aaKnown RBP14.01□□□□□ -0.17
CDKN2A-208ENST00000498124 GAGE2BQ13066 116 aa14.01□□□□□ -0.17
CDKN2A-208ENST00000498124 PMCHL2Q9BQD1 86 aa14.01□□□□□ -0.17
CDKN2A-208ENST00000498124 S100A2P29034 98 aa14□□□□□ -0.17
CDKN2A-208ENST00000498124 C3orf79P0CE67 100 aa13.99□□□□□ -0.17
CDKN2A-208ENST00000498124 HIST3H2BBQ8N257 126 aa13.99□□□□□ -0.17
CDKN2A-208ENST00000498124 KRTDAPP60985 99 aa13.98□□□□□ -0.17
CDKN2A-208ENST00000498124 LINC01545Q5VT33 79 aa13.98□□□□□ -0.17
CDKN2A-208ENST00000498124 SFTA2Q6UW10 78 aa13.98□□□□□ -0.17
CDKN2A-208ENST00000498124 NDUFC2-KCTD14E9PQ53 114 aa13.97□□□□□ -0.17
CDKN2A-208ENST00000498124 HERVK_113P61574 105 aa13.97□□□□□ -0.17
CDKN2A-208ENST00000498124 C9orf116Q5BN46 136 aaPredicted RBP13.97□□□□□ -0.17
CDKN2A-208ENST00000498124 SRSF9Q13242 221 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDKN2A-208ENST00000498124 SPINK6Q6UWN8 80 aa13.95□□□□□ -0.18
CDKN2A-208ENST00000498124 Q6ZRP5 223 aa13.95□□□□□ -0.18
CDKN2A-208ENST00000498124 C20orf202A1L168 122 aa13.94□□□□□ -0.18
CDKN2A-208ENST00000498124 HIST1H2BLQ99880 126 aa13.94□□□□□ -0.18
CDKN2A-208ENST00000498124 A0A1W2PNN7 141 aa13.93□□□□□ -0.18
CDKN2A-208ENST00000498124 SNRPEP62304 92 aaKnown RBP13.93□□□□□ -0.18
CDKN2A-208ENST00000498124 GAGE2EQ4V326 116 aa13.93□□□□□ -0.18
CDKN2A-208ENST00000498124 GAGE2DQ9UEU5 116 aa13.93□□□□□ -0.18
CDKN2A-208ENST00000498124 RNF213Q63HN8 5207 aa13.93□□□□□ -0.18
CDKN2A-208ENST00000498124 KRTAP10-8P60410 259 aa13.92□□□□□ -0.18
CDKN2A-208ENST00000498124 PLEKHB2Q96CS7 222 aa13.92□□□□□ -0.18
CDKN2A-208ENST00000498124 LEPROTO15243 131 aa13.91□□□□□ -0.18
CDKN2A-208ENST00000498124 ZNF625Q96I27 306 aaPredicted RBP13.9□□□□□ -0.18
CDKN2A-208ENST00000498124 C5orf52A6NGY3 159 aa13.89□□□□□ -0.19
CDKN2A-208ENST00000498124 AKR1D1P51857 326 aa13.89□□□□□ -0.19
CDKN2A-208ENST00000498124 REG3GQ6UW15 175 aa13.88□□□□□ -0.19
CDKN2A-208ENST00000498124 NDUFA12Q9UI09 145 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms