RNA–Protein interactions for RNA: ENST00000498053.5

LRRFIP1-215, Transcript of LRR binding FLII interacting protein 1, human

TSL 3

Gene LRRFIP1, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-215	ENST00000498053	TRAV12-1	A0A0B4J245	112 aa		11.28	□□□□□ -0.6
LRRFIP1-215	ENST00000498053	SPACA4	Q8TDM5	124 aa		11.28	□□□□□ -0.6
LRRFIP1-215	ENST00000498053	KRTAP4-5	Q9BYR2	181 aa		11.28	□□□□□ -0.6
LRRFIP1-215	ENST00000498053	MRPL35	Q9NZE8	188 aa	Known RBP	11.28	□□□□□ -0.6
LRRFIP1-215	ENST00000498053	PRSS2	P07478	247 aa		11.27	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	CIRBP	Q14011	172 aa	Known RBP	11.27	□□□□□ -0.61
LRRFIP1-215	ENST00000498053		Q8IZM0	81 aa		11.27	□□□□□ -0.61
LRRFIP1-215	ENST00000498053		H3BRM9	83 aa		11.26	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	TMEM170B	Q5T4T1	132 aa		11.26	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	LOC107984640	A0A0U1RRK4	108 aa		11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053		F8VRH5	84 aa		11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	RPL18A	Q02543	176 aa	Known RBP	11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	GAGE2B	Q13066	116 aa		11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	ODF1	Q14990	250 aa		11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	MAJIN	Q3KP22	176 aa		11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	C9orf116	Q5BN46	136 aa	Predicted RBP	11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	C6orf226	Q5I0X4	101 aa		11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053		Q8N1X5	172 aa		11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	COX7B2	Q8TF08	81 aa		11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	HSPB8	Q9UJY1	196 aa		11.25	□□□□□ -0.61
LRRFIP1-215	ENST00000498053		F8WDY8	70 aa		11.24	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	COA6	Q5JTJ3	125 aa	Known RBP	11.24	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	PMCHL2	Q9BQD1	86 aa		11.24	□□□□□ -0.61
LRRFIP1-215	ENST00000498053		A0A087WYN8	130 aa		11.23	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	PTTG1IP	P53801	180 aa		11.23	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	CKS1B	P61024	79 aa		11.23	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	RNF151	Q2KHN1	245 aa		11.23	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	PCLO	Q9Y6V0	5065 aa		11.23	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	IGLV5-39	A0A0G2JS06	123 aa		11.22	□□□□□ -0.61
LRRFIP1-215	ENST00000498053		Q5VSD8	79 aa		11.22	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	LINC00528	Q8N1L1	170 aa		11.22	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	DPH3	Q96FX2	82 aa		11.22	□□□□□ -0.61
LRRFIP1-215	ENST00000498053	TRBV30	A0A0K0K1B3	111 aa		11.21	□□□□□ -0.61
LRRFIP1-215	ENST00000498053		Q6ZRP5	223 aa		11.2	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	STPG4	Q8N801	248 aa		11.2	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	PKIG	Q9Y2B9	76 aa		11.2	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	TMEM223	A0PJW6	202 aa		11.19	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	MAP1LC3C	Q9BXW4	147 aa		11.19	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	EPM2A	B3EWF7	344 aa		11.18	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	TLX1NB	P0CAT3	122 aa		11.18	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	CXCL5	P42830	114 aa		11.18	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	GAGE2E	Q4V326	116 aa		11.18	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	PLAC8	Q9NZF1	115 aa		11.18	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	GAGE2D	Q9UEU5	116 aa		11.18	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	PKHD1L1	Q86WI1	4243 aa		11.17	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	SYS1-DBNDD2	H3BUS1	97 aa		11.16	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	LINC00474	Q9P2X8	69 aa		11.16	□□□□□ -0.62
LRRFIP1-215	ENST00000498053		A0A1W2PNN7	141 aa		11.15	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	NDUFC2-KCTD14	E9PQ53	114 aa		11.15	□□□□□ -0.62
LRRFIP1-215	ENST00000498053	FAM168B	A1KXE4	195 aa		11.14	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	DPM2	O94777	84 aa		11.14	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	IGKC	P01834	107 aa		11.14	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	C3orf79	P0CE67	100 aa		11.14	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	FAM229A	H3BQW9	127 aa		11.13	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	PLN	P26678	52 aa		11.13	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	ZNF625	Q96I27	306 aa	Predicted RBP	11.13	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	KRTDAP	P60985	99 aa		11.12	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	C9orf129	Q5T035	196 aa	Known RBP	11.12	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	TSPEAR-AS2	P59090	65 aa		11.11	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	HIST3H2BB	Q8N257	126 aa		11.11	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	XAGE1A	Q9HD64	81 aa		11.11	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	KRTAP10-4	P60372	401 aa	Predicted RBP	11.1	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	LINC01545	Q5VT33	79 aa		11.1	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.1	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	KRTAP7-1	Q8IUC3	87 aa		11.1	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	PFN2	P35080	140 aa		11.09	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	PET117	Q6UWS5	81 aa		11.09	□□□□□ -0.63
LRRFIP1-215	ENST00000498053	S100A6	P06703	90 aa		11.08	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	RPL37A	P61513	92 aa	Known RBP	11.08	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	PHF5A	Q7RTV0	110 aa	Known RBP	11.07	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	HIST1H2BL	Q99880	126 aa		11.07	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	ERG28	Q9UKR5	140 aa		11.07	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	PLA2G1B	P04054	148 aa	Known RBP	11.06	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	SERTAD4-AS1	Q5TG53	156 aa		11.06	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	SRRM2	Q9UQ35	2752 aa	Known RBP	11.05	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	LEPROT	O15243	131 aa		11.05	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	S100A2	P29034	98 aa		11.05	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	HERVK_113	P61574	105 aa		11.05	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	SNRPE	P62304	92 aa	Known RBP	11.05	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	C7orf33	Q8WU49	177 aa		11.05	□□□□□ -0.64
LRRFIP1-215	ENST00000498053		A0A0U1RRA0	63 aa		11.04	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	NDUFA12	Q9UI09	145 aa		11.04	□□□□□ -0.64
LRRFIP1-215	ENST00000498053		J3QQQ9	107 aa		11.03	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	HNRNPA3	P51991	378 aa	Known RBP	11.03	□□□□□ -0.64
LRRFIP1-215	ENST00000498053	PLEKHB2	Q96CS7	222 aa		11.03	□□□□□ -0.64
LRRFIP1-215	ENST00000498053		M0QXV9	152 aa		11.02	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	SFTA2	Q6UW10	78 aa		11.02	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	ATOH7	Q8N100	152 aa		11.02	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	INAFM2	P0DMQ5	153 aa		11.01	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	KRTAP11-1	Q8IUC1	163 aa		11.01	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	C20orf202	A1L168	122 aa		11	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	C5orf52	A6NGY3	159 aa		11	□□□□□ -0.65
LRRFIP1-215	ENST00000498053		E9PLD3	99 aa		11	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	SMIM13	P0DJ93	91 aa		11	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	LGALS3	P17931	250 aa	Known RBP	11	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	LINC00158	P58513	81 aa		11	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	MEIG1	Q5JSS6	88 aa		11	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	SND1-IT1	Q9HBX3	110 aa		11	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	MYMX	A0A1B0GTQ4	84 aa		10.99	□□□□□ -0.65
LRRFIP1-215	ENST00000498053	PRR3	P79522	188 aa	Known RBP	10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms