RNA–Protein interactions for RNA: ENST00000496944.1

NIPSNAP1-206, Transcript of nipsnap homolog 1, humanhuman

TSL 2

Gene NIPSNAP1, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-206ENST00000496944 SYS1-DBNDD2H3BUS1 97 aa13.71□□□□□ -0.21
NIPSNAP1-206ENST00000496944 XGP55808 180 aa13.71□□□□□ -0.21
NIPSNAP1-206ENST00000496944 C10orf25Q5T742 122 aa13.71□□□□□ -0.21
NIPSNAP1-206ENST00000496944 C2orf82Q6UX34 121 aa13.71□□□□□ -0.21
NIPSNAP1-206ENST00000496944 DPM2O94777 84 aa13.7□□□□□ -0.22
NIPSNAP1-206ENST00000496944 CIRBPQ14011 172 aaKnown RBP13.7□□□□□ -0.22
NIPSNAP1-206ENST00000496944 C6orf48Q9UBA6 75 aa13.7□□□□□ -0.22
NIPSNAP1-206ENST00000496944 TMEM223A0PJW6 202 aa13.69□□□□□ -0.22
NIPSNAP1-206ENST00000496944 PET117Q6UWS5 81 aa13.69□□□□□ -0.22
NIPSNAP1-206ENST00000496944 LINC00474Q9P2X8 69 aa13.69□□□□□ -0.22
NIPSNAP1-206ENST00000496944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.68□□□□□ -0.22
NIPSNAP1-206ENST00000496944 A0A096LNI7 61 aa13.66□□□□□ -0.22
NIPSNAP1-206ENST00000496944 IGKCP01834 107 aa13.66□□□□□ -0.22
NIPSNAP1-206ENST00000496944 TLX1NBP0CAT3 122 aa13.66□□□□□ -0.22
NIPSNAP1-206ENST00000496944 S100A2P29034 98 aa13.66□□□□□ -0.22
NIPSNAP1-206ENST00000496944 SCXQ7RTU7 201 aa13.66□□□□□ -0.22
NIPSNAP1-206ENST00000496944 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
NIPSNAP1-206ENST00000496944 SPACA4Q8TDM5 124 aa13.66□□□□□ -0.22
NIPSNAP1-206ENST00000496944 C3orf79P0CE67 100 aa13.65□□□□□ -0.22
NIPSNAP1-206ENST00000496944 CHTF8P0CG12 524 aa13.65□□□□□ -0.22
NIPSNAP1-206ENST00000496944 LINC01545Q5VT33 79 aa13.65□□□□□ -0.22
NIPSNAP1-206ENST00000496944 SFTA2Q6UW10 78 aa13.65□□□□□ -0.22
NIPSNAP1-206ENST00000496944 PMCHL2Q9BQD1 86 aa13.65□□□□□ -0.22
NIPSNAP1-206ENST00000496944 APOBP04114 4563 aaKnown RBP13.64□□□□□ -0.23
NIPSNAP1-206ENST00000496944 IGKV2-24A0A0C4DH68 120 aa13.64□□□□□ -0.23
NIPSNAP1-206ENST00000496944 PANO1I0J062 215 aa13.64□□□□□ -0.23
NIPSNAP1-206ENST00000496944 PTTG1IPP53801 180 aa13.64□□□□□ -0.23
NIPSNAP1-206ENST00000496944 KRTDAPP60985 99 aa13.64□□□□□ -0.23
NIPSNAP1-206ENST00000496944 KIAA1109Q2LD37 5005 aa13.64□□□□□ -0.23
NIPSNAP1-206ENST00000496944 RPL18AQ02543 176 aaKnown RBP13.63□□□□□ -0.23
NIPSNAP1-206ENST00000496944 CIRBP-AS1Q8TBR5 109 aa13.63□□□□□ -0.23
NIPSNAP1-206ENST00000496944 DNAH8Q96JB1 4490 aa13.62□□□□□ -0.23
NIPSNAP1-206ENST00000496944 NDUFC2-KCTD14E9PQ53 114 aa13.62□□□□□ -0.23
NIPSNAP1-206ENST00000496944 HERVK_113P61574 105 aa13.62□□□□□ -0.23
NIPSNAP1-206ENST00000496944 HAMPP81172 84 aa13.62□□□□□ -0.23
NIPSNAP1-206ENST00000496944 DPH3Q96FX2 82 aa13.62□□□□□ -0.23
NIPSNAP1-206ENST00000496944 HIST1H2BLQ99880 126 aa13.62□□□□□ -0.23
NIPSNAP1-206ENST00000496944 C20orf202A1L168 122 aa13.61□□□□□ -0.23
NIPSNAP1-206ENST00000496944 GAGE2BQ13066 116 aa13.61□□□□□ -0.23
NIPSNAP1-206ENST00000496944 MAJINQ3KP22 176 aa13.61□□□□□ -0.23
NIPSNAP1-206ENST00000496944 A0A087WYN8 130 aa13.59□□□□□ -0.23
NIPSNAP1-206ENST00000496944 AKR1D1P51857 326 aa13.59□□□□□ -0.23
NIPSNAP1-206ENST00000496944 SNRPEP62304 92 aaKnown RBP13.59□□□□□ -0.23
NIPSNAP1-206ENST00000496944 C9orf116Q5BN46 136 aaPredicted RBP13.59□□□□□ -0.23
NIPSNAP1-206ENST00000496944 PLAC8Q9NZF1 115 aa13.59□□□□□ -0.23
NIPSNAP1-206ENST00000496944 C5orf52A6NGY3 159 aa13.58□□□□□ -0.24
NIPSNAP1-206ENST00000496944 Q6ZRP5 223 aa13.58□□□□□ -0.24
NIPSNAP1-206ENST00000496944 PLEKHB2Q96CS7 222 aa13.58□□□□□ -0.24
NIPSNAP1-206ENST00000496944 RYR1P21817 5038 aa13.58□□□□□ -0.24
NIPSNAP1-206ENST00000496944 STPG4Q8N801 248 aa13.57□□□□□ -0.24
NIPSNAP1-206ENST00000496944 ZNF625Q96I27 306 aaPredicted RBP13.57□□□□□ -0.24
NIPSNAP1-206ENST00000496944 HSPG2P98160 4391 aa13.57□□□□□ -0.24
NIPSNAP1-206ENST00000496944 LEPROTO15243 131 aa13.56□□□□□ -0.24
NIPSNAP1-206ENST00000496944 Q8N1X5 172 aa13.55□□□□□ -0.24
NIPSNAP1-206ENST00000496944 GAGE2EQ4V326 116 aa13.54□□□□□ -0.24
NIPSNAP1-206ENST00000496944 GAGE2DQ9UEU5 116 aa13.54□□□□□ -0.24
NIPSNAP1-206ENST00000496944 EPM2AB3EWF7 344 aa13.52□□□□□ -0.25
NIPSNAP1-206ENST00000496944 E9PLD3 99 aa13.52□□□□□ -0.25
NIPSNAP1-206ENST00000496944 J3QQQ9 107 aa13.52□□□□□ -0.25
NIPSNAP1-206ENST00000496944 HERV-K104P63124 156 aa13.52□□□□□ -0.25
NIPSNAP1-206ENST00000496944 COX17Q14061 63 aa13.52□□□□□ -0.25
NIPSNAP1-206ENST00000496944 NDUFA12Q9UI09 145 aa13.52□□□□□ -0.25
NIPSNAP1-206ENST00000496944 ERG28Q9UKR5 140 aa13.52□□□□□ -0.25
NIPSNAP1-206ENST00000496944 MYMXA0A1B0GTQ4 84 aa13.51□□□□□ -0.25
NIPSNAP1-206ENST00000496944 SMR3BP02814 79 aaPredicted RBP13.51□□□□□ -0.25
NIPSNAP1-206ENST00000496944 FAM229AH3BQW9 127 aa13.5□□□□□ -0.25
NIPSNAP1-206ENST00000496944 LGALS3P17931 250 aaKnown RBP13.5□□□□□ -0.25
NIPSNAP1-206ENST00000496944 NMUP48645 174 aa13.5□□□□□ -0.25
NIPSNAP1-206ENST00000496944 TSPEAR-AS2P59090 65 aa13.5□□□□□ -0.25
NIPSNAP1-206ENST00000496944 LINC00528Q8N1L1 170 aa13.5□□□□□ -0.25
NIPSNAP1-206ENST00000496944 HERC2O95714 4834 aa13.5□□□□□ -0.25
NIPSNAP1-206ENST00000496944 LINC00587B1AMM8 73 aa13.48□□□□□ -0.25
NIPSNAP1-206ENST00000496944 PFN2P35080 140 aa13.48□□□□□ -0.25
NIPSNAP1-206ENST00000496944 A0A1W2PNN7 141 aa13.47□□□□□ -0.25
NIPSNAP1-206ENST00000496944 C9orf129Q5T035 196 aaKnown RBP13.47□□□□□ -0.25
NIPSNAP1-206ENST00000496944 XAGE1AQ9HD64 81 aa13.46□□□□□ -0.25
NIPSNAP1-206ENST00000496944 Q5VSD8 79 aa13.45□□□□□ -0.26
NIPSNAP1-206ENST00000496944 C7orf33Q8WU49 177 aa13.45□□□□□ -0.26
NIPSNAP1-206ENST00000496944 KRTAP17-1Q9BYP8 105 aa13.44□□□□□ -0.26
NIPSNAP1-206ENST00000496944 FAM168BA1KXE4 195 aa13.43□□□□□ -0.26
NIPSNAP1-206ENST00000496944 PLA2G1BP04054 148 aaKnown RBP13.43□□□□□ -0.26
NIPSNAP1-206ENST00000496944 LINC00158P58513 81 aa13.43□□□□□ -0.26
NIPSNAP1-206ENST00000496944 MEIG1Q5JSS6 88 aa13.43□□□□□ -0.26
NIPSNAP1-206ENST00000496944 FAM19A5Q7Z5A7 132 aaPredicted RBP13.42□□□□□ -0.26
NIPSNAP1-206ENST00000496944 ATOH7Q8N100 152 aa13.42□□□□□ -0.26
NIPSNAP1-206ENST00000496944 SND1-IT1Q9HBX3 110 aa13.41□□□□□ -0.26
NIPSNAP1-206ENST00000496944 PLA2G2DQ9UNK4 145 aa13.41□□□□□ -0.26
NIPSNAP1-206ENST00000496944 TMA7Q9Y2S6 64 aaKnown RBP13.41□□□□□ -0.26
NIPSNAP1-206ENST00000496944 SMIM13P0DJ93 91 aa13.4□□□□□ -0.26
NIPSNAP1-206ENST00000496944 IGKV2D-26A0A0A0MRZ7 120 aa13.39□□□□□ -0.27
NIPSNAP1-206ENST00000496944 RPL37AP61513 92 aaKnown RBP13.39□□□□□ -0.27
NIPSNAP1-206ENST00000496944 KRTAP7-1Q8IUC3 87 aa13.39□□□□□ -0.27
NIPSNAP1-206ENST00000496944 M0QXV9 152 aa13.38□□□□□ -0.27
NIPSNAP1-206ENST00000496944 SCGB1D1O95968 90 aa13.38□□□□□ -0.27
NIPSNAP1-206ENST00000496944 SERTAD4-AS1Q5TG53 156 aa13.38□□□□□ -0.27
NIPSNAP1-206ENST00000496944 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
NIPSNAP1-206ENST00000496944 ANKRD39Q53RE8 183 aa13.37□□□□□ -0.27
NIPSNAP1-206ENST00000496944 HSBP1L1C9JCN9 74 aa13.36□□□□□ -0.27
NIPSNAP1-206ENST00000496944 PHF5AQ7RTV0 110 aaKnown RBP13.36□□□□□ -0.27
NIPSNAP1-206ENST00000496944 MIR7-3HGQ8N6C7 128 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms