RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 C6orf226Q5I0X4 101 aa11.9□□□□□ -0.5
TSSC4-210ENST00000496468 Q6ZRU5 148 aa11.9□□□□□ -0.5
TSSC4-210ENST00000496468 GCSHP23434 173 aa11.89□□□□□ -0.51
TSSC4-210ENST00000496468 AKR1D1P51857 326 aa11.89□□□□□ -0.51
TSSC4-210ENST00000496468 LINC01620Q4KN68 170 aa11.88□□□□□ -0.51
TSSC4-210ENST00000496468 C2orf82Q6UX34 121 aa11.88□□□□□ -0.51
TSSC4-210ENST00000496468 C9orf163Q8N9P6 203 aa11.88□□□□□ -0.51
TSSC4-210ENST00000496468 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
TSSC4-210ENST00000496468 C10orf25Q5T742 122 aa11.85□□□□□ -0.51
TSSC4-210ENST00000496468 ATOH7Q8N100 152 aa11.85□□□□□ -0.51
TSSC4-210ENST00000496468 PKIGQ9Y2B9 76 aa11.85□□□□□ -0.51
TSSC4-210ENST00000496468 LRP1BQ9NZR2 4599 aa11.84□□□□□ -0.51
TSSC4-210ENST00000496468 TRBV30A0A0K0K1B3 111 aa11.84□□□□□ -0.51
TSSC4-210ENST00000496468 C6orf48Q9UBA6 75 aa11.84□□□□□ -0.51
TSSC4-210ENST00000496468 LEPROTO15243 131 aa11.83□□□□□ -0.52
TSSC4-210ENST00000496468 RNF151Q2KHN1 245 aa11.83□□□□□ -0.52
TSSC4-210ENST00000496468 SFTA2Q6UW10 78 aa11.83□□□□□ -0.52
TSSC4-210ENST00000496468 PLEKHB2Q96CS7 222 aa11.83□□□□□ -0.52
TSSC4-210ENST00000496468 E9PLD3 99 aa11.82□□□□□ -0.52
TSSC4-210ENST00000496468 SCGB1D1O95968 90 aa11.82□□□□□ -0.52
TSSC4-210ENST00000496468 KRTAP10-1P60331 282 aa11.82□□□□□ -0.52
TSSC4-210ENST00000496468 TSPEAR-AS2P59090 65 aa11.81□□□□□ -0.52
TSSC4-210ENST00000496468 STPG4Q8N801 248 aa11.81□□□□□ -0.52
TSSC4-210ENST00000496468 LOC107984640A0A0U1RRK4 108 aa11.8□□□□□ -0.52
TSSC4-210ENST00000496468 J3QQQ9 107 aa11.8□□□□□ -0.52
TSSC4-210ENST00000496468 LGALS3P17931 250 aaKnown RBP11.8□□□□□ -0.52
TSSC4-210ENST00000496468 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
TSSC4-210ENST00000496468 ZNF625Q96I27 306 aaPredicted RBP11.79□□□□□ -0.52
TSSC4-210ENST00000496468 NDUFA12Q9UI09 145 aa11.79□□□□□ -0.52
TSSC4-210ENST00000496468 C9orf116Q5BN46 136 aaPredicted RBP11.78□□□□□ -0.52
TSSC4-210ENST00000496468 SDIM1Q6ZPB5 146 aa11.78□□□□□ -0.52
TSSC4-210ENST00000496468 DNAH8Q96JB1 4490 aa11.78□□□□□ -0.52
TSSC4-210ENST00000496468 HSBP1L1C9JCN9 74 aa11.77□□□□□ -0.53
TSSC4-210ENST00000496468 NMUP48645 174 aa11.77□□□□□ -0.53
TSSC4-210ENST00000496468 A0A096LNI7 61 aa11.76□□□□□ -0.53
TSSC4-210ENST00000496468 IGKV2-24A0A0C4DH68 120 aa11.76□□□□□ -0.53
TSSC4-210ENST00000496468 MYMXA0A1B0GTQ4 84 aa11.76□□□□□ -0.53
TSSC4-210ENST00000496468 NDUFC2-KCTD14E9PQ53 114 aa11.76□□□□□ -0.53
TSSC4-210ENST00000496468 TLX1NBP0CAT3 122 aa11.76□□□□□ -0.53
TSSC4-210ENST00000496468 HERV-K104P63124 156 aa11.75□□□□□ -0.53
TSSC4-210ENST00000496468 JOSD1Q15040 202 aaPredicted RBP11.75□□□□□ -0.53
TSSC4-210ENST00000496468 ANKRD39Q53RE8 183 aa11.75□□□□□ -0.53
TSSC4-210ENST00000496468 Q6ZSA8 131 aa11.75□□□□□ -0.53
TSSC4-210ENST00000496468 IGKV2D-26A0A0A0MRZ7 120 aa11.74□□□□□ -0.53
TSSC4-210ENST00000496468 CHTF8P0CG12 524 aa11.74□□□□□ -0.53
TSSC4-210ENST00000496468 PTTG1IPP53801 180 aa11.74□□□□□ -0.53
TSSC4-210ENST00000496468 GAGE2BQ13066 116 aa11.74□□□□□ -0.53
TSSC4-210ENST00000496468 ERG28Q9UKR5 140 aa11.74□□□□□ -0.53
TSSC4-210ENST00000496468 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.74□□□□□ -0.53
TSSC4-210ENST00000496468 MAJINQ3KP22 176 aa11.73□□□□□ -0.53
TSSC4-210ENST00000496468 Q6ZRP5 223 aa11.73□□□□□ -0.53
TSSC4-210ENST00000496468 SPACA4Q8TDM5 124 aa11.73□□□□□ -0.53
TSSC4-210ENST00000496468 LINC00474Q9P2X8 69 aa11.73□□□□□ -0.53
TSSC4-210ENST00000496468 APOBP04114 4563 aaKnown RBP11.73□□□□□ -0.53
TSSC4-210ENST00000496468 BIRC6Q9NR09 4857 aa11.72□□□□□ -0.53
TSSC4-210ENST00000496468 MEIG1Q5JSS6 88 aa11.72□□□□□ -0.53
TSSC4-210ENST00000496468 FAM30AQ9NZY2 134 aa11.72□□□□□ -0.53
TSSC4-210ENST00000496468 PANO1I0J062 215 aa11.71□□□□□ -0.53
TSSC4-210ENST00000496468 PFN2P35080 140 aa11.71□□□□□ -0.53
TSSC4-210ENST00000496468 GAGE2EQ4V326 116 aa11.71□□□□□ -0.53
TSSC4-210ENST00000496468 GAGE2DQ9UEU5 116 aa11.71□□□□□ -0.53
TSSC4-210ENST00000496468 ZNF815PA8K554 130 aa11.7□□□□□ -0.54
TSSC4-210ENST00000496468 CIRBPQ14011 172 aaKnown RBP11.7□□□□□ -0.54
TSSC4-210ENST00000496468 COX17Q14061 63 aa11.7□□□□□ -0.54
TSSC4-210ENST00000496468 PYY3Q5JQD4 70 aa11.69□□□□□ -0.54
TSSC4-210ENST00000496468 TTTY13Q9BZ97 58 aa11.69□□□□□ -0.54
TSSC4-210ENST00000496468 LINC00587B1AMM8 73 aa11.68□□□□□ -0.54
TSSC4-210ENST00000496468 HAMPP81172 84 aa11.68□□□□□ -0.54
TSSC4-210ENST00000496468 VAMP8Q9BV40 100 aa11.68□□□□□ -0.54
TSSC4-210ENST00000496468 SMIM13P0DJ93 91 aa11.67□□□□□ -0.54
TSSC4-210ENST00000496468 LINC00158P58513 81 aa11.67□□□□□ -0.54
TSSC4-210ENST00000496468 SCXQ7RTU7 201 aa11.67□□□□□ -0.54
TSSC4-210ENST00000496468 DPH3Q96FX2 82 aa11.67□□□□□ -0.54
TSSC4-210ENST00000496468 A0A0J9YXY3 114 aa11.66□□□□□ -0.54
TSSC4-210ENST00000496468 A0A0U1RRA0 63 aa11.66□□□□□ -0.54
TSSC4-210ENST00000496468 CDK2AP2O75956 126 aa11.66□□□□□ -0.54
TSSC4-210ENST00000496468 XAGE1AQ9HD64 81 aa11.66□□□□□ -0.54
TSSC4-210ENST00000496468 PAM16Q9Y3D7 125 aa11.66□□□□□ -0.54
TSSC4-210ENST00000496468 PCP2Q8IVA1 136 aa11.65□□□□□ -0.54
TSSC4-210ENST00000496468 C9orf129Q5T035 196 aaKnown RBP11.64□□□□□ -0.55
TSSC4-210ENST00000496468 A0A087WYN8 130 aa11.63□□□□□ -0.55
TSSC4-210ENST00000496468 SPATA45Q537H7 98 aa11.63□□□□□ -0.55
TSSC4-210ENST00000496468 SCGB1D4Q6XE38 83 aa11.63□□□□□ -0.55
TSSC4-210ENST00000496468 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
TSSC4-210ENST00000496468 SND1-IT1Q9HBX3 110 aa11.63□□□□□ -0.55
TSSC4-210ENST00000496468 RYR1P21817 5038 aa11.63□□□□□ -0.55
TSSC4-210ENST00000496468 XGP55808 180 aa11.62□□□□□ -0.55
TSSC4-210ENST00000496468 MIR7-3HGQ8N6C7 128 aa11.62□□□□□ -0.55
TSSC4-210ENST00000496468 PLAC8Q9NZF1 115 aa11.62□□□□□ -0.55
TSSC4-210ENST00000496468 FAM19A5Q7Z5A7 132 aaPredicted RBP11.61□□□□□ -0.55
TSSC4-210ENST00000496468 KIAA1109Q2LD37 5005 aa11.6□□□□□ -0.55
TSSC4-210ENST00000496468 FAM168BA1KXE4 195 aa11.6□□□□□ -0.55
TSSC4-210ENST00000496468 TIMM17BO60830 172 aa11.6□□□□□ -0.55
TSSC4-210ENST00000496468 DAND5Q8N907 189 aa11.6□□□□□ -0.55
TSSC4-210ENST00000496468 HSPG2P98160 4391 aa11.6□□□□□ -0.55
TSSC4-210ENST00000496468 A0A1W2PNN7 141 aa11.58□□□□□ -0.56
TSSC4-210ENST00000496468 TMEM238C9JI98 176 aa11.58□□□□□ -0.56
TSSC4-210ENST00000496468 COX8AP10176 69 aa11.58□□□□□ -0.56
TSSC4-210ENST00000496468 LOC105371267A0A1B0GV96 52 aa11.57□□□□□ -0.56
TSSC4-210ENST00000496468 SMIM6P0DI80 62 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 211 ms