RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 HERC1Q15751 4861 aa10.62□□□□□ -0.71
COMMD3-214ENST00000496071 C6orf226Q5I0X4 101 aa10.62□□□□□ -0.71
COMMD3-214ENST00000496071 Q8IZM0 81 aa10.62□□□□□ -0.71
COMMD3-214ENST00000496071 CDKN2A-AS1Q9UH64 79 aa10.62□□□□□ -0.71
COMMD3-214ENST00000496071 CKS1BP61024 79 aa10.61□□□□□ -0.71
COMMD3-214ENST00000496071 C2orf82Q6UX34 121 aa10.61□□□□□ -0.71
COMMD3-214ENST00000496071 TOMM7Q9P0U1 55 aa10.61□□□□□ -0.71
COMMD3-214ENST00000496071 TINCRA0A1B0GVN0 87 aa10.6□□□□□ -0.71
COMMD3-214ENST00000496071 LINC00614P0C842 121 aa10.59□□□□□ -0.71
COMMD3-214ENST00000496071 PMVKQ15126 192 aa10.59□□□□□ -0.71
COMMD3-214ENST00000496071 GAGE2EQ4V326 116 aa10.59□□□□□ -0.71
COMMD3-214ENST00000496071 C18orf32Q8TCD1 76 aa10.59□□□□□ -0.71
COMMD3-214ENST00000496071 CST9LQ9H4G1 147 aa10.59□□□□□ -0.71
COMMD3-214ENST00000496071 GAGE2DQ9UEU5 116 aa10.59□□□□□ -0.71
COMMD3-214ENST00000496071 NDUFC2-KCTD14E9PQ53 114 aa10.58□□□□□ -0.72
COMMD3-214ENST00000496071 LINC00469Q8N7U9 141 aa10.58□□□□□ -0.72
COMMD3-214ENST00000496071 PKHD1L1Q86WI1 4243 aa10.57□□□□□ -0.72
COMMD3-214ENST00000496071 RAB5BP61020 215 aa10.57□□□□□ -0.72
COMMD3-214ENST00000496071 SERTAD4-AS1Q5TG53 156 aa10.57□□□□□ -0.72
COMMD3-214ENST00000496071 SPINK6Q6UWN8 80 aa10.57□□□□□ -0.72
COMMD3-214ENST00000496071 LRP1Q07954 4544 aaKnown RBP10.56□□□□□ -0.72
COMMD3-214ENST00000496071 IGLV5-45A0A087WSX0 123 aa10.56□□□□□ -0.72
COMMD3-214ENST00000496071 CXCL5P42830 114 aa10.56□□□□□ -0.72
COMMD3-214ENST00000496071 PDZD11Q5EBL8 140 aa10.56□□□□□ -0.72
COMMD3-214ENST00000496071 PHF5AQ7RTV0 110 aaKnown RBP10.56□□□□□ -0.72
COMMD3-214ENST00000496071 F8VRH5 84 aa10.55□□□□□ -0.72
COMMD3-214ENST00000496071 SMIM1B2RUZ4 78 aa10.54□□□□□ -0.72
COMMD3-214ENST00000496071 HBDP02042 147 aa10.54□□□□□ -0.72
COMMD3-214ENST00000496071 SRSF9Q13242 221 aaKnown RBP eCLIP10.54□□□□□ -0.72
COMMD3-214ENST00000496071 URB1-AS1Q96HZ7 61 aa10.54□□□□□ -0.72
COMMD3-214ENST00000496071 PSORS1C2Q9UIG4 136 aa10.54□□□□□ -0.72
COMMD3-214ENST00000496071 A0A096LNJ9 63 aa10.53□□□□□ -0.72
COMMD3-214ENST00000496071 FAM168BA1KXE4 195 aa10.53□□□□□ -0.72
COMMD3-214ENST00000496071 FAM19A5Q7Z5A7 132 aaPredicted RBP10.53□□□□□ -0.72
COMMD3-214ENST00000496071 FAT3Q8TDW7 4589 aa10.52□□□□□ -0.72
COMMD3-214ENST00000496071 H3BRM9 83 aa10.52□□□□□ -0.73
COMMD3-214ENST00000496071 REG3GQ6UW15 175 aa10.52□□□□□ -0.73
COMMD3-214ENST00000496071 COX7B2Q8TF08 81 aa10.52□□□□□ -0.73
COMMD3-214ENST00000496071 YPEL4Q96NS1 127 aa10.52□□□□□ -0.73
COMMD3-214ENST00000496071 ATP5LO75964 103 aa10.51□□□□□ -0.73
COMMD3-214ENST00000496071 MT1HL1P0DM35 61 aa10.51□□□□□ -0.73
COMMD3-214ENST00000496071 NDUFA6P56556 154 aa10.51□□□□□ -0.73
COMMD3-214ENST00000496071 C9orf129Q5T035 196 aaKnown RBP10.51□□□□□ -0.73
COMMD3-214ENST00000496071 LINC01600Q96MT4 127 aa10.51□□□□□ -0.73
COMMD3-214ENST00000496071 C1orf137Q5JT78 98 aa10.5□□□□□ -0.73
COMMD3-214ENST00000496071 M0QXV9 152 aa10.49□□□□□ -0.73
COMMD3-214ENST00000496071 SPINK8P0C7L1 97 aa10.49□□□□□ -0.73
COMMD3-214ENST00000496071 IGLC3P0DOY3 106 aa10.49□□□□□ -0.73
COMMD3-214ENST00000496071 PMCHL1Q16048 86 aa10.48□□□□□ -0.73
COMMD3-214ENST00000496071 KRTAP7-1Q8IUC3 87 aa10.48□□□□□ -0.73
COMMD3-214ENST00000496071 CHCHD1Q96BP2 118 aaKnown RBP10.48□□□□□ -0.73
COMMD3-214ENST00000496071 UBE2BP63146 152 aa10.46□□□□□ -0.73
COMMD3-214ENST00000496071 ODF1Q14990 250 aa10.46□□□□□ -0.73
COMMD3-214ENST00000496071 BAGE3Q86Y29 109 aa10.46□□□□□ -0.73
COMMD3-214ENST00000496071 XAGE1AQ9HD64 81 aa10.46□□□□□ -0.73
COMMD3-214ENST00000496071 IGLV7-43P04211 117 aa10.45□□□□□ -0.74
COMMD3-214ENST00000496071 CBLN2Q8IUK8 224 aa10.45□□□□□ -0.74
COMMD3-214ENST00000496071 ZNF22P17026 224 aaPredicted RBP10.44□□□□□ -0.74
COMMD3-214ENST00000496071 LBHQ53QV2 105 aaPredicted RBP10.44□□□□□ -0.74
COMMD3-214ENST00000496071 IGLV5-39A0A0G2JS06 123 aa10.43□□□□□ -0.74
COMMD3-214ENST00000496071 KRTAP11-1Q8IUC1 163 aa10.43□□□□□ -0.74
COMMD3-214ENST00000496071 C22orf24Q9Y442 160 aa10.43□□□□□ -0.74
COMMD3-214ENST00000496071 SLC7A5P1Q8MH63 180 aa10.42□□□□□ -0.74
COMMD3-214ENST00000496071 DIRC1Q969H9 104 aa10.42□□□□□ -0.74
COMMD3-214ENST00000496071 TMEM170BQ5T4T1 132 aa10.41□□□□□ -0.74
COMMD3-214ENST00000496071 TP73-AS1Q9UF72 201 aa10.41□□□□□ -0.74
COMMD3-214ENST00000496071 PLA2G2DQ9UNK4 145 aa10.41□□□□□ -0.74
COMMD3-214ENST00000496071 CHTOPQ9Y3Y2 248 aaKnown RBP10.41□□□□□ -0.74
COMMD3-214ENST00000496071 TRAV12-1A0A0B4J245 112 aa10.4□□□□□ -0.74
COMMD3-214ENST00000496071 C11orf86A6NJI1 115 aa10.4□□□□□ -0.74
COMMD3-214ENST00000496071 HSBP1O75506 76 aa10.4□□□□□ -0.74
COMMD3-214ENST00000496071 KRTAP10-8P60410 259 aa10.4□□□□□ -0.74
COMMD3-214ENST00000496071 IFI27L1Q96BM0 104 aa10.4□□□□□ -0.74
COMMD3-214ENST00000496071 TRGC2P03986 189 aa10.39□□□□□ -0.75
COMMD3-214ENST00000496071 SFTA2Q6UW10 78 aa10.39□□□□□ -0.75
COMMD3-214ENST00000496071 NUPR1O60356 82 aa10.38□□□□□ -0.75
COMMD3-214ENST00000496071 MRPL55Q7Z7F7 128 aaKnown RBP10.38□□□□□ -0.75
COMMD3-214ENST00000496071 H0Y9J4 135 aa10.37□□□□□ -0.75
COMMD3-214ENST00000496071 COX17Q14061 63 aa10.37□□□□□ -0.75
COMMD3-214ENST00000496071 PFN2P35080 140 aa10.35□□□□□ -0.75
COMMD3-214ENST00000496071 FAM19A2Q8N3H0 131 aa10.35□□□□□ -0.75
COMMD3-214ENST00000496071 ERG28Q9UKR5 140 aa10.35□□□□□ -0.75
COMMD3-214ENST00000496071 IGLV5-37A0A075B6J1 123 aa10.34□□□□□ -0.75
COMMD3-214ENST00000496071 TMEM223A0PJW6 202 aa10.33□□□□□ -0.76
COMMD3-214ENST00000496071 NKAPP1Q8N9T2 125 aa10.33□□□□□ -0.76
COMMD3-214ENST00000496071 LINC00167Q96N53 147 aa10.33□□□□□ -0.76
COMMD3-214ENST00000496071 COLCA2A8K830 154 aa10.32□□□□□ -0.76
COMMD3-214ENST00000496071 ZNF861PO60384 105 aa10.32□□□□□ -0.76
COMMD3-214ENST00000496071 LEPROTL1O95214 131 aa10.32□□□□□ -0.76
COMMD3-214ENST00000496071 SERF1AO75920 110 aa10.31□□□□□ -0.76
COMMD3-214ENST00000496071 ZNF625Q96I27 306 aaPredicted RBP10.31□□□□□ -0.76
COMMD3-214ENST00000496071 SND1-IT1Q9HBX3 110 aa10.3□□□□□ -0.76
COMMD3-214ENST00000496071 RPL37AP8A6NKH3 93 aa10.29□□□□□ -0.76
COMMD3-214ENST00000496071 BCE1O60756 84 aa10.29□□□□□ -0.76
COMMD3-214ENST00000496071 RPL24P83731 157 aaKnown RBP10.29□□□□□ -0.76
COMMD3-214ENST00000496071 IGLV1-50A0A075B6I6 118 aa10.28□□□□□ -0.76
COMMD3-214ENST00000496071 A6NJY4 79 aa10.28□□□□□ -0.76
COMMD3-214ENST00000496071 RPL28P46779 137 aaKnown RBP10.28□□□□□ -0.76
COMMD3-214ENST00000496071 LINC00310P59036 64 aa10.28□□□□□ -0.76
COMMD3-214ENST00000496071 HSPB8Q9UJY1 196 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms