RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 FAM25CB3EWG5 89 aa1.4□□□□□ -2.19
CMSS1-207ENST00000494412 FAM25GB3EWG6 89 aa1.4□□□□□ -2.19
CMSS1-207ENST00000494412 GNG7O60262 68 aa1.4□□□□□ -2.19
CMSS1-207ENST00000494412 TFF1P04155 84 aa1.4□□□□□ -2.19
CMSS1-207ENST00000494412 PYYP10082 97 aa1.4□□□□□ -2.19
CMSS1-207ENST00000494412 SELENOWP63302 87 aa1.4□□□□□ -2.19
CMSS1-207ENST00000494412 ARL11Q969Q4 196 aa1.4□□□□□ -2.19
CMSS1-207ENST00000494412 DMAC1Q96GE9 116 aa1.4□□□□□ -2.19
CMSS1-207ENST00000494412 ATG5Q9H1Y0 275 aa1.4□□□□□ -2.19
CMSS1-207ENST00000494412 SPTBP11277 2137 aa1.4□□□□□ -2.19
CMSS1-207ENST00000494412 MYH9P35579 1960 aaKnown RBP1.39□□□□□ -2.19
CMSS1-207ENST00000494412 ARL14EPLP0DKL9 152 aa1.39□□□□□ -2.19
CMSS1-207ENST00000494412 EFNA4P52798 201 aa1.39□□□□□ -2.19
CMSS1-207ENST00000494412 C6orf52Q5T4I8 152 aa1.39□□□□□ -2.19
CMSS1-207ENST00000494412 Q6ZS92 163 aa1.39□□□□□ -2.19
CMSS1-207ENST00000494412 Q6ZUT4 128 aa1.39□□□□□ -2.19
CMSS1-207ENST00000494412 PPDPFLQ8WWR9 84 aa1.39□□□□□ -2.19
CMSS1-207ENST00000494412 LINC00470Q9BZP3 86 aa1.39□□□□□ -2.19
CMSS1-207ENST00000494412 TMEM191AQ9H0A3 160 aa1.39□□□□□ -2.19
CMSS1-207ENST00000494412 PLCE1Q9P212 2302 aa1.38□□□□□ -2.19
CMSS1-207ENST00000494412 CADP27708 2225 aa1.38□□□□□ -2.19
CMSS1-207ENST00000494412 TRAV2A0A0B4J234 112 aa1.38□□□□□ -2.19
CMSS1-207ENST00000494412 STATHP02808 62 aa1.38□□□□□ -2.19
CMSS1-207ENST00000494412 GUCA1AP43080 201 aaPredicted RBP1.38□□□□□ -2.19
CMSS1-207ENST00000494412 RRAS2P62070 204 aaPredicted RBP1.38□□□□□ -2.19
CMSS1-207ENST00000494412 TFF3Q07654 80 aa1.38□□□□□ -2.19
CMSS1-207ENST00000494412 RPL13AP3Q6NVV1 102 aa1.38□□□□□ -2.19
CMSS1-207ENST00000494412 KCNRGQ8N5I3 272 aa1.38□□□□□ -2.19
CMSS1-207ENST00000494412 SDF2Q99470 211 aa1.38□□□□□ -2.19
CMSS1-207ENST00000494412 CCL19Q99731 98 aa1.38□□□□□ -2.19
CMSS1-207ENST00000494412 MRPL35Q9NZE8 188 aaKnown RBP1.38□□□□□ -2.19
CMSS1-207ENST00000494412 FAT4Q6V0I7 4981 aa1.38□□□□□ -2.19
CMSS1-207ENST00000494412 STARD9Q9P2P6 4700 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 MED12Q93074 2177 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 RNF213Q63HN8 5207 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.37□□□□□ -2.19
CMSS1-207ENST00000494412 TRBV10-1A0A0K0K1A3 114 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 SPTY2D1-AS1A0A0U1RR47 76 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 HIGD1CA8MV81 97 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 PITX3O75364 302 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 CCKP06307 115 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 SLC25A6P12236 298 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 SCIMPQ6UWF3 145 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 Q6ZQY7 126 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 Q86TA4 180 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 VSTM2AQ8TAG5 236 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 DNAH3Q8TD57 4116 aa1.37□□□□□ -2.19
CMSS1-207ENST00000494412 SRRM2Q9UQ35 2752 aaKnown RBP1.37□□□□□ -2.19
CMSS1-207ENST00000494412 LOC101927531A0A1B0GV80 90 aa1.36□□□□□ -2.19
CMSS1-207ENST00000494412 KRTAP10-4P60372 401 aaPredicted RBP1.36□□□□□ -2.19
CMSS1-207ENST00000494412 EMX2Q04743 252 aa1.36□□□□□ -2.19
CMSS1-207ENST00000494412 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
CMSS1-207ENST00000494412 LINC01545Q5VT33 79 aa1.36□□□□□ -2.19
CMSS1-207ENST00000494412 CCDC167Q9P0B6 97 aa1.36□□□□□ -2.19
CMSS1-207ENST00000494412 KMT2AQ03164 3969 aa1.36□□□□□ -2.19
CMSS1-207ENST00000494412 CXorf51AA0A1B0GTR3 108 aa1.35□□□□□ -2.19
CMSS1-207ENST00000494412 C10orf142B7Z368 130 aa1.35□□□□□ -2.19
CMSS1-207ENST00000494412 UQCRHP07919 91 aa1.35□□□□□ -2.19
CMSS1-207ENST00000494412 SPCS2Q15005 226 aa1.35□□□□□ -2.19
CMSS1-207ENST00000494412 XAF1Q6GPH4 301 aa1.35□□□□□ -2.19
CMSS1-207ENST00000494412 LINC00575Q6W349 94 aa1.35□□□□□ -2.19
CMSS1-207ENST00000494412 C1orf54Q8WWF1 131 aa1.35□□□□□ -2.19
CMSS1-207ENST00000494412 ALMS1Q8TCU4 4167 aa1.35□□□□□ -2.19
CMSS1-207ENST00000494412 WNK2Q9Y3S1 2297 aa1.35□□□□□ -2.19
CMSS1-207ENST00000494412 DNAH9Q9NYC9 4486 aa1.34□□□□□ -2.19
CMSS1-207ENST00000494412 TRBV30A0A0K0K1B3 111 aa1.34□□□□□ -2.19
CMSS1-207ENST00000494412 APOC1P02654 83 aa1.34□□□□□ -2.19
CMSS1-207ENST00000494412 PIRTP0C851 137 aa1.34□□□□□ -2.19
CMSS1-207ENST00000494412 DPH3Q96FX2 82 aa1.34□□□□□ -2.19
CMSS1-207ENST00000494412 NDUFA12Q9UI09 145 aa1.34□□□□□ -2.19
CMSS1-207ENST00000494412 HMCN2Q8NDA2 5059 aa1.34□□□□□ -2.2
CMSS1-207ENST00000494412 A0A1B0GV90 55 aa1.33□□□□□ -2.2
CMSS1-207ENST00000494412 FAM92AA1XBS5 289 aa1.33□□□□□ -2.2
CMSS1-207ENST00000494412 CCDC179H3BU77 68 aa1.33□□□□□ -2.2
CMSS1-207ENST00000494412 IL5P05113 134 aa1.33□□□□□ -2.2
CMSS1-207ENST00000494412 FXYD3Q14802 87 aa1.33□□□□□ -2.2
CMSS1-207ENST00000494412 SPANXN1Q5VSR9 72 aa1.33□□□□□ -2.2
CMSS1-207ENST00000494412 LINC00208Q96KT6 92 aa1.33□□□□□ -2.2
CMSS1-207ENST00000494412 PDCD10Q9BUL8 212 aa1.33□□□□□ -2.2
CMSS1-207ENST00000494412 TMEM242Q9NWH2 141 aa1.33□□□□□ -2.2
CMSS1-207ENST00000494412 PKHD1P08F94 4074 aa1.33□□□□□ -2.2
CMSS1-207ENST00000494412 PLECQ15149 4684 aaKnown RBP1.32□□□□□ -2.2
CMSS1-207ENST00000494412 TRAV12-2A0A075B6T6 113 aa1.32□□□□□ -2.2
CMSS1-207ENST00000494412 NBDYA0A0U1RRE5 68 aa1.32□□□□□ -2.2
CMSS1-207ENST00000494412 CAV3P56539 151 aa1.32□□□□□ -2.2
CMSS1-207ENST00000494412 DEFB121Q5J5C9 76 aa1.32□□□□□ -2.2
CMSS1-207ENST00000494412 OR2T2Q6IF00 324 aa1.32□□□□□ -2.2
CMSS1-207ENST00000494412 DNAH10Q8IVF4 4471 aa1.32□□□□□ -2.2
CMSS1-207ENST00000494412 TCHHQ07283 1943 aa1.32□□□□□ -2.2
CMSS1-207ENST00000494412 SNCGO76070 127 aa1.31□□□□□ -2.2
CMSS1-207ENST00000494412 TNFP01375 233 aa1.31□□□□□ -2.2
CMSS1-207ENST00000494412 HIST1H1DP16402 221 aaKnown RBP1.31□□□□□ -2.2
CMSS1-207ENST00000494412 C5orf56Q8N8D9 126 aa1.31□□□□□ -2.2
CMSS1-207ENST00000494412 SPTSSAQ969W0 71 aa1.31□□□□□ -2.2
CMSS1-207ENST00000494412 IFI27L1Q96BM0 104 aa1.31□□□□□ -2.2
CMSS1-207ENST00000494412 MYCBP2O75592 4640 aa1.31□□□□□ -2.2
CMSS1-207ENST00000494412 FSIP2Q5CZC0 6907 aa1.31□□□□□ -2.2
CMSS1-207ENST00000494412 DNAJC13O75165 2243 aa1.3□□□□□ -2.2
CMSS1-207ENST00000494412 A0A096LNT2 108 aa1.3□□□□□ -2.2
CMSS1-207ENST00000494412 FXYD1O00168 92 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms