RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 RETNQ9HD89 108 aa8.61□□□□□ -1.03
PHF3-205ENST00000494284 C6orf226Q5I0X4 101 aa8.61□□□□□ -1.03
PHF3-205ENST00000494284 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
PHF3-205ENST00000494284 IGHV4-28A0A0C4DH34 117 aa8.6□□□□□ -1.03
PHF3-205ENST00000494284 PAX4O43316 350 aa8.6□□□□□ -1.03
PHF3-205ENST00000494284 SCGB1A1P11684 91 aa8.6□□□□□ -1.03
PHF3-205ENST00000494284 CMYA5Q8N3K9 4069 aa8.6□□□□□ -1.03
PHF3-205ENST00000494284 IGKV2-28A0A075B6P5 120 aa8.59□□□□□ -1.03
PHF3-205ENST00000494284 IGKV2D-28P01615 120 aa8.59□□□□□ -1.03
PHF3-205ENST00000494284 NBEAL1Q6ZS30 2694 aa8.59□□□□□ -1.03
PHF3-205ENST00000494284 LINC00959A0A1B0GUT2 108 aa8.59□□□□□ -1.04
PHF3-205ENST00000494284 COX7A2LO14548 114 aa8.59□□□□□ -1.04
PHF3-205ENST00000494284 CRPP02741 224 aa8.59□□□□□ -1.04
PHF3-205ENST00000494284 CCL18P55774 89 aa8.59□□□□□ -1.04
PHF3-205ENST00000494284 C9orf116Q5BN46 136 aaPredicted RBP8.59□□□□□ -1.04
PHF3-205ENST00000494284 LINC00269Q8N2A0 174 aa8.59□□□□□ -1.04
PHF3-205ENST00000494284 ANAPC13Q9BS18 74 aa8.59□□□□□ -1.04
PHF3-205ENST00000494284 SLPIP03973 132 aa8.58□□□□□ -1.04
PHF3-205ENST00000494284 GAGE2BQ13066 116 aa8.58□□□□□ -1.04
PHF3-205ENST00000494284 GAGE2EQ4V326 116 aa8.58□□□□□ -1.04
PHF3-205ENST00000494284 GAGE2DQ9UEU5 116 aa8.58□□□□□ -1.04
PHF3-205ENST00000494284 C9orf66Q5T8R8 295 aa8.58□□□□□ -1.04
PHF3-205ENST00000494284 BAALC-AS2P0C853 105 aa8.57□□□□□ -1.04
PHF3-205ENST00000494284 CITED1Q99966 193 aa8.57□□□□□ -1.04
PHF3-205ENST00000494284 A0A087WYN8 130 aa8.57□□□□□ -1.04
PHF3-205ENST00000494284 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
PHF3-205ENST00000494284 IGHV4-30-4P0DP06 118 aa8.56□□□□□ -1.04
PHF3-205ENST00000494284 SHISA2Q6UWI4 295 aa8.56□□□□□ -1.04
PHF3-205ENST00000494284 SMIM11BQ8TCY0 68 aa8.56□□□□□ -1.04
PHF3-205ENST00000494284 H3BT86 120 aa8.56□□□□□ -1.04
PHF3-205ENST00000494284 ANGP03950 147 aaKnown RBP8.56□□□□□ -1.04
PHF3-205ENST00000494284 HERV-K104P63124 156 aa8.56□□□□□ -1.04
PHF3-205ENST00000494284 CYSRT1A8MQ03 144 aa8.55□□□□□ -1.04
PHF3-205ENST00000494284 FAM19A3Q7Z5A8 133 aa8.55□□□□□ -1.04
PHF3-205ENST00000494284 PRB2P02812 416 aaPredicted RBP8.55□□□□□ -1.04
PHF3-205ENST00000494284 A0A087WZ39 114 aa8.54□□□□□ -1.04
PHF3-205ENST00000494284 KIR2DL5BQ8NHK3 375 aa8.54□□□□□ -1.04
PHF3-205ENST00000494284 C3orf56Q8N813 242 aa8.54□□□□□ -1.04
PHF3-205ENST00000494284 PRO0255Q9UI72 69 aa8.54□□□□□ -1.04
PHF3-205ENST00000494284 KRTAP10-11P60412 298 aa8.53□□□□□ -1.04
PHF3-205ENST00000494284 LINC00612Q8N6U2 182 aa8.53□□□□□ -1.04
PHF3-205ENST00000494284 DAD1P61803 113 aa8.53□□□□□ -1.04
PHF3-205ENST00000494284 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
PHF3-205ENST00000494284 Q8NAQ8 132 aa8.53□□□□□ -1.04
PHF3-205ENST00000494284 LYSTQ99698 3801 aa8.52□□□□□ -1.04
PHF3-205ENST00000494284 LECT2O14960 151 aa8.52□□□□□ -1.05
PHF3-205ENST00000494284 SS18Q15532 418 aa8.52□□□□□ -1.05
PHF3-205ENST00000494284 M0QXV9 152 aa8.51□□□□□ -1.05
PHF3-205ENST00000494284 NHLRC4P0CG21 123 aaPredicted RBP8.51□□□□□ -1.05
PHF3-205ENST00000494284 C6orf223Q8N319 242 aa8.51□□□□□ -1.05
PHF3-205ENST00000494284 SMCR5Q8TEV8 140 aa8.51□□□□□ -1.05
PHF3-205ENST00000494284 C22orf24Q9Y442 160 aa8.51□□□□□ -1.05
PHF3-205ENST00000494284 TRAV13-2A0A0B4J235 113 aa8.51□□□□□ -1.05
PHF3-205ENST00000494284 B5MCH6 92 aa8.51□□□□□ -1.05
PHF3-205ENST00000494284 DNAL4O96015 105 aa8.51□□□□□ -1.05
PHF3-205ENST00000494284 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
PHF3-205ENST00000494284 C14orf132Q9NPU4 83 aa8.51□□□□□ -1.05
PHF3-205ENST00000494284 BAHCC1Q9P281 2608 aa8.5□□□□□ -1.05
PHF3-205ENST00000494284 MALP21145 153 aa8.5□□□□□ -1.05
PHF3-205ENST00000494284 NDUFV3P56181 108 aaKnown RBP8.5□□□□□ -1.05
PHF3-205ENST00000494284 KRTAP24-1Q3LI83 254 aa8.5□□□□□ -1.05
PHF3-205ENST00000494284 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
PHF3-205ENST00000494284 CCDC179H3BU77 68 aa8.49□□□□□ -1.05
PHF3-205ENST00000494284 NCR3O14931 201 aa8.49□□□□□ -1.05
PHF3-205ENST00000494284 REG3AQ06141 175 aa8.48□□□□□ -1.05
PHF3-205ENST00000494284 MGAM2Q2M2H8 2515 aa8.48□□□□□ -1.05
PHF3-205ENST00000494284 WFDC9Q8NEX5 89 aa8.48□□□□□ -1.05
PHF3-205ENST00000494284 SS18L2Q9UHA2 77 aa8.48□□□□□ -1.05
PHF3-205ENST00000494284 IBA57-AS1B1ANH7 110 aa8.47□□□□□ -1.05
PHF3-205ENST00000494284 RPL28P46779 137 aaKnown RBP8.47□□□□□ -1.05
PHF3-205ENST00000494284 APOC4P55056 127 aa8.47□□□□□ -1.05
PHF3-205ENST00000494284 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
PHF3-205ENST00000494284 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
PHF3-205ENST00000494284 C10orf25Q5T742 122 aa8.47□□□□□ -1.05
PHF3-205ENST00000494284 Q8NDZ9 215 aa8.47□□□□□ -1.05
PHF3-205ENST00000494284 SMIM9A6NGZ8 99 aa8.46□□□□□ -1.05
PHF3-205ENST00000494284 TRACP01848 142 aa8.46□□□□□ -1.06
PHF3-205ENST00000494284 CFAP161Q6P656 301 aa8.46□□□□□ -1.06
PHF3-205ENST00000494284 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
PHF3-205ENST00000494284 UNQ6190/PRO20217Q6UXQ8 127 aa8.45□□□□□ -1.06
PHF3-205ENST00000494284 FAM236AA0A1B0GUQ0 79 aa8.43□□□□□ -1.06
PHF3-205ENST00000494284 FAM236BA0A1B0GV22 79 aa8.43□□□□□ -1.06
PHF3-205ENST00000494284 A0A1B0GUV1 79 aa8.43□□□□□ -1.06
PHF3-205ENST00000494284 Q6ZTC4 211 aa8.43□□□□□ -1.06
PHF3-205ENST00000494284 SPART-AS1P0CW21 52 aa8.43□□□□□ -1.06
PHF3-205ENST00000494284 LINC01600Q96MT4 127 aa8.43□□□□□ -1.06
PHF3-205ENST00000494284 WIPF1O43516 503 aa8.42□□□□□ -1.06
PHF3-205ENST00000494284 KIAA0087Q14695 138 aa8.42□□□□□ -1.06
PHF3-205ENST00000494284 XAGE1AQ9HD64 81 aa8.42□□□□□ -1.06
PHF3-205ENST00000494284 CD164L2Q6UWJ8 174 aa8.42□□□□□ -1.06
PHF3-205ENST00000494284 Q8IZM0 81 aa8.42□□□□□ -1.06
PHF3-205ENST00000494284 COL7A1Q02388 2944 aa8.41□□□□□ -1.06
PHF3-205ENST00000494284 IGKV3D-7A0A0C4DH55 119 aa8.41□□□□□ -1.06
PHF3-205ENST00000494284 DEFB121Q5J5C9 76 aa8.41□□□□□ -1.06
PHF3-205ENST00000494284 SDIM1Q6ZPB5 146 aa8.41□□□□□ -1.06
PHF3-205ENST00000494284 WFDC10BQ8IUB3 73 aa8.41□□□□□ -1.06
PHF3-205ENST00000494284 MIFP14174 115 aa8.41□□□□□ -1.06
PHF3-205ENST00000494284 NANOS2P60321 138 aaKnown RBP8.4□□□□□ -1.06
PHF3-205ENST00000494284 HIGD2BQ4VC39 106 aa8.4□□□□□ -1.06
PHF3-205ENST00000494284 SPAG11BQ08648 103 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms